Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 5.9e-212 740.7 408 100.0
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 4.7e-161 571.6 454 72.9
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 8.4e-158 560.8 399 81.5
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 7.8e-156 554.3 399 78.7
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 8.4e-150 534.3 397 75.3
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 1.1e-141 507.3 402 72.6
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.9e-141 506.5 389 72.8
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.2e-140 503.8 380 74.5
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 2.7e-140 502.7 375 74.9
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 5.6e-138 495.0 401 67.3
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 6.2e-137 491.5 407 69.0
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 5.3e-136 488.4 395 66.3
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 5.3e-136 488.4 374 73.3
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 6.9e-136 488.0 386 67.4
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.5e-135 486.9 385 67.3
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 2.0e-135 486.5 381 67.5
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.7e-134 483.4 393 71.2
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.9e-134 482.6 373 72.7
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.9e-134 481.9 398 66.6
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.4e-134 481.1 407 65.4
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.4e-134 481.1 407 65.4
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 1.9e-133 479.9 398 66.6
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 4.2e-133 478.8 400 67.0
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 4.2e-133 478.8 391 69.1
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.1e-132 476.5 402 67.7
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 2.7e-132 476.1 404 65.3
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 4.6e-132 475.3 395 66.8
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 4.6e-132 475.3 385 70.4
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 6.0e-132 474.9 394 69.5
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 6.0e-132 474.9 391 67.3
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.0e-131 474.2 404 70.5
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 1.8e-131 473.4 406 65.0
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 2.3e-131 473.0 400 64.0
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 3.9e-131 472.2 408 70.1
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 6.7e-131 471.5 403 70.0
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 8.7e-131 471.1 398 65.6
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 1.1e-130 470.7 391 71.1
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 1.5e-130 470.3 407 67.1
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.5e-130 470.3 400 66.8
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.9e-130 469.9 399 67.2
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 1.9e-130 469.9 405 63.5
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 1.9e-130 469.9 405 67.9
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 3.3e-130 469.2 405 65.2
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 5.7e-130 468.4 430 62.1
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 1.3e-129 467.2 373 70.5
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.8e-129 466.1 376 69.7
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 4.8e-129 465.3 380 69.7
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 6.3e-129 464.9 403 64.8
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 8.2e-129 464.5 413 63.4
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 2.4e-128 463.0 396 67.2
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 2.4e-128 463.0 391 68.5
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 9.0e-128 461.1 385 65.2
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.0e-127 459.9 330 72.4
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 5.9e-127 458.4 389 66.8
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 2.9e-126 456.1 391 71.4
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 6.5e-126 454.9 418 62.7
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 6.5e-126 454.9 391 63.4
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 3.0e-123 446.0 396 62.4
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.7e-123 444.9 397 63.2
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 3.3e-122 442.6 384 68.8
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 9.7e-122 441.0 394 66.0
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 1.1e-120 437.6 405 63.0
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 2.4e-120 436.4 273 79.5
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 2.4e-120 436.4 410 59.0
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 4.1e-120 435.6 395 64.1
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 5.3e-120 435.3 399 62.4
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 5.3e-120 435.3 399 62.4
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 5.3e-120 435.3 389 61.2
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 5.3e-120 435.3 398 64.3
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 6.9e-120 434.9 415 61.9
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 4.5e-119 432.2 414 58.9
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 4.5e-119 432.2 414 58.9
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 5.9e-119 431.8 410 58.5
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 7.7e-119 431.4 392 61.5
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.2e-116 424.1 384 60.2
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.1e-116 423.3 403 60.5
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 6.1e-116 421.8 296 72.6
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.8e-115 420.2 296 72.6
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 3.0e-115 419.5 391 58.8
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 1.1e-114 417.5 408 58.8
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 3.3e-114 416.0 261 80.1
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 3.5e-111 406.0 319 66.8
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.1e-109 401.0 281 73.7
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 5.5e-109 398.7 396 61.6
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 2.7e-108 396.4 414 55.6
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 8.0e-108 394.8 299 69.6
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 1.0e-107 394.4 405 61.5
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.4e-107 394.0 291 75.9
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 1.1e-106 391.0 414 59.4
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 7.4e-106 388.3 416 54.6
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 2.8e-105 386.3 302 69.2
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 7.0e-104 381.7 305 67.5
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 7.7e-103 378.3 278 67.3
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 2.2e-102 376.7 304 67.8
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.9e-94 349.7 254 72.8
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.4e-91 340.9 421 46.1
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 2.0e-90 337.0 213 76.1
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 2.6e-90 336.7 298 64.8
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.6e-90 336.7 405 53.3
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 7.5e-90 335.1 405 54.1
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 3.1e-88 329.7 239 72.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.4e-88 328.9 331 57.7
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 4.5e-87 325.9 375 54.9
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.7e-86 323.9 284 58.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.5e-85 320.1 198 82.3
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 3.7e-81 306.2 408 48.0
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 5.9e-79 298.9 261 64.8
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 3.3e-69 266.5 159 79.2
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 8.0e-68 261.9 214 66.4
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.5e-63 246.5 295 53.6
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 7.8e-63 245.4 257 56.4
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.2e-60 238.0 217 54.4
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.4e-59 234.6 283 46.3
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 6.2e-44 182.6 191 47.1
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.6e-39 167.9 272 34.9
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 2.4e-32 144.1 200 38.0
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.3e-28 131.7 158 48.1
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 2.4e-27 127.5 178 46.1
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 4.3e-21 106.7 87 67.8
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 1.8e-14 84.7 90 56.7
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.8e-11 74.7 43 72.1
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.4e-10 70.5 132 42.4
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 3.2e-08 63.9 74 50.0
Atru.chr11.1544 Acer truncatum HOM05D006305 ORTHO05D007984 5.5e-08 63.2 74 52.7


User provided reference genes

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