Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p053735 Quercus lobata HOM05D001937 ORTHO05D003828 4.8e-104 381.3 214 100.0
QL03p022329 Quercus lobata HOM05D001937 ORTHO05D003828 5.5e-100 367.9 214 96.7
QL03p072736 Quercus lobata HOM05D001937 ORTHO05D003828 1.2e-99 366.7 214 95.8
QL11p029100 Quercus lobata HOM05D001937 ORTHO05D003828 1.2e-99 366.7 214 96.7
QL03p060281 Quercus lobata HOM05D001937 ORTHO05D003828 1.0e-98 363.6 214 96.3
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 3.8e-85 318.5 214 78.5
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 3.7e-72 275.4 214 75.2
QL04p008924 Quercus lobata HOM05D001937 ORTHO05D003828 4.1e-71 271.9 214 78.5
QL12p036527 Quercus lobata HOM05D001937 ORTHO05D003828 4.1e-71 271.9 214 78.5
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 7.0e-71 271.2 214 75.2
QL12p030812 Quercus lobata HOM05D001937 ORTHO05D003828 5.9e-70 268.1 168 91.1
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 2.5e-68 262.7 222 73.0
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 1.6e-67 260.0 215 73.0
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 6.1e-67 258.1 223 70.9
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 1.1e-65 253.8 215 70.7
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.5e-65 253.4 216 73.1
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 9.7e-65 250.8 217 71.9
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 2.2e-64 249.6 211 68.7
QL02p062665 Quercus lobata HOM05D001937 ORTHO05D003828 8.2e-64 247.7 208 75.5
QL06p020738 Quercus lobata HOM05D001937 ORTHO05D003828 8.2e-64 247.7 208 75.5
Sed0011905 Sechium edule HOM05D001937 ORTHO05D003828 1.4e-63 246.9 215 68.8
Dinv15990 Davidia involucrata HOM05D001937 ORTHO05D003828 2.4e-63 246.1 222 68.9
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.4e-63 246.1 224 66.1
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 2.4e-63 246.1 217 70.0
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 3.1e-63 245.7 215 68.8
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 1.6e-62 243.4 215 69.3
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 1.0e-61 240.7 217 68.2
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 1.0e-61 240.7 212 70.8
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 1.7e-61 240.0 217 70.5
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 2.9e-61 239.2 212 65.1
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 3.8e-61 238.8 223 68.6
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 1.5e-60 236.9 212 69.8
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 1.9e-60 236.5 223 67.7
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 3.2e-60 235.7 212 64.2
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 5.5e-60 235.0 216 69.4
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 1.2e-59 233.8 216 69.9
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.1e-59 233.0 224 64.3
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 8.0e-59 231.1 216 69.0
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 1.0e-58 230.7 224 62.9
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 2.3e-58 229.6 211 65.9
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 8.8e-58 227.6 212 67.5
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 1.5e-57 226.9 220 64.1
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.4e-57 225.7 216 63.9
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 5.7e-57 224.9 216 67.1
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 7.5e-57 224.6 221 64.7
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 9.8e-57 224.2 208 70.7
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.3e-56 223.8 223 61.0
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 2.8e-56 222.6 211 66.8
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 6.3e-56 221.5 216 67.1
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 6.3e-56 221.5 210 61.9
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 6.3e-56 221.5 217 61.3
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 8.3e-56 221.1 223 64.6
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 8.3e-56 221.1 212 65.1
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 1.1e-55 220.7 210 61.9
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 1.4e-55 220.3 214 62.1
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 7.0e-55 218.0 212 62.3
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 1.6e-54 216.9 224 65.2
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 7.7e-54 214.5 224 58.0
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 1.0e-53 214.2 211 64.5
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 1.3e-53 213.8 223 64.1
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 1.3e-53 213.8 224 64.7
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.7e-53 213.4 223 63.2
Solyc07g006820.4 Solanum lycopersicum HOM05D001937 ORTHO05D003828 2.9e-53 212.6 206 62.1
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 2.9e-53 212.6 206 62.1
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 8.5e-53 211.1 224 64.3
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 5.5e-52 208.4 224 63.4
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 7.2e-52 208.0 216 57.4
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 7.2e-52 208.0 189 69.8
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 1.2e-51 207.2 221 58.4
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 1.2e-51 207.2 222 57.2
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 2.7e-51 206.1 217 57.1
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 3.6e-51 205.7 223 62.8
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 3.6e-51 205.7 223 62.8
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 4.7e-51 205.3 214 56.1
Atru.chr3.3791 Acer truncatum HOM05D001937 ORTHO05D003828 4.0e-50 202.2 141 80.9
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 1.3e-48 197.2 216 55.6
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 2.2e-48 196.4 215 57.2
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 4.9e-48 195.3 205 58.0
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 6.3e-48 194.9 205 58.0
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 6.3e-48 194.9 222 58.6
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 7.0e-47 191.4 202 57.4
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 9.2e-47 191.0 225 58.7
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 1.6e-46 190.3 219 54.8
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 3.5e-46 189.1 222 57.7
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 4.5e-46 188.7 224 58.5
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 4.5e-46 188.7 224 58.5
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 4.5e-46 188.7 223 54.3
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 5.9e-46 188.3 219 58.4
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 5.9e-46 188.3 223 53.8
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 7.7e-46 188.0 224 58.0
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 7.7e-46 188.0 209 56.5
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 1.7e-45 186.8 224 57.6
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 2.3e-45 186.4 222 58.1
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 2.9e-45 186.0 219 58.4
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 5.0e-45 185.3 221 57.5
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 1.1e-44 184.1 220 57.3
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 1.1e-44 184.1 140 75.0
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 8.0e-43 177.9 235 51.1
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 1.8e-42 176.8 216 56.9
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 5.2e-42 175.3 214 54.2
Aqoxy3G01594 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 8.9e-42 174.5 181 58.6
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 8.9e-42 174.5 216 57.4
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 5.7e-41 171.8 200 61.5
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 3.7e-40 169.1 139 67.6
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 3.7e-40 169.1 140 70.7
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 3.7e-40 169.1 140 70.7
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 4.9e-40 168.7 140 70.7
SEGI_20322 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 1.1e-39 167.5 140 68.6
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 5.4e-39 165.2 222 50.0
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 7.0e-39 164.9 270 44.8
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 9.2e-39 164.5 222 54.1
Os06g0645800 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D003828 1.6e-38 163.7 210 48.6
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 2.0e-38 163.3 222 53.6
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 2.0e-38 163.3 209 51.2
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 1.5e-36 157.1 216 47.7
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 5.6e-36 155.2 139 66.2
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 9.5e-36 154.5 139 66.2
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 9.5e-36 154.5 139 66.2
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 1.2e-35 154.1 139 66.2
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 1.2e-35 154.1 139 66.2
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 5.2e-34 148.7 173 56.1
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 6.8e-34 148.3 139 60.4
HPP92_017202 Vanilla planifolia HOM05D001937 ORTHO05D003828 1.2e-33 147.5 204 47.1
Pp3c14_1870 Physcomitrium patens HOM05D001937 ORTHO05D003828 3.4e-33 146.0 221 48.9
RcHm_v2.0_Chr5g0013481 Rosa chinensis HOM05D001937 ORTHO05D003828 3.4e-33 146.0 192 53.6
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 1.1e-31 141.0 122 64.8
AagrBONN_evm.TU.Sc2ySwM_117.3403 Anthoceros agrestis HOM05D001937 ORTHO05D003828 3.5e-30 136.0 223 43.0
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 6.6e-29 131.7 138 60.9
Mapoly0010s0177 Marchantia polymorpha HOM05D001937 ORTHO05D003828 1.2e-27 127.5 219 44.7
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 7.5e-25 118.2 246 40.7
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 2.2e-24 116.7 271 39.1
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.7e-24 115.9 238 40.8
Pp3c10_350 Physcomitrium patens HOM05D001937 ORTHO05D003828 8.3e-24 114.8 218 44.5
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.9e-23 113.6 251 41.8
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 1.4e-18 97.4 112 55.4
Mapoly0048s0004 Marchantia polymorpha HOM05D001937 ORTHO05D003828 8.4e-16 88.2 185 37.8
Prupe.1G009900 Prunus persica HOM05D001937 ORTHO05D003828 1.6e-14 84.0 177 42.9
CBR_g2821 Chara braunii HOM05D001937 ORTHO05D003828 1.9e-12 77.0 115 44.3
Lsat_1_v5_gn_4_144260 Lactuca sativa HOM05D001937 ORTHO05D003828 7.3e-12 75.1 69 66.7
PSO384G4225 Papaver somniferum HOM05D003118 ORTHO05D003618 2.1e-11 73.6 143 39.2
CARHR094480 Cardamine hirsuta HOM05D001937 ORTHO05D003828 8.1e-11 71.6 46 80.4
PSO266G0025 Papaver somniferum HOM05D048025 ORTHO05D003828 2.0e-09 67.0 130 41.5
Aqoxy3G01486 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 7.1e-07 58.5 47 63.8
PSO266G0061 Papaver somniferum HOM05D001937 ORTHO05D003828 2.1e-06 57.0 148 32.4


User provided reference genes

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