Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p013523 Quercus lobata HOM05D000924 ORTHO05D001209 4.6e-132 474.6 236 100.0
CiPaw.07G131100 Carya illinoinensis HOM05D000924 ORTHO05D001209 8.3e-33 144.8 185 51.4
Cfa014157 Carpinus fangiana HOM05D000924 ORTHO05D001209 1.8e-32 143.7 163 55.8
Haze_22879 Corylus avellana HOM05D000924 ORTHO05D001209 3.2e-32 142.9 163 55.2
QL04p003238 Quercus lobata HOM05D000924 ORTHO05D001209 5.0e-30 135.6 156 55.8
MBI15_g36602_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 1.9e-29 133.7 161 51.6
MD04G1240400 Malus domestica HOM05D000924 ORTHO05D001209 5.6e-29 132.1 164 50.6
Dinv10292 Davidia involucrata HOM05D000924 ORTHO05D001209 9.5e-29 131.3 185 45.9
Ciclev10010890m.g Citrus clementina HOM05D000924 ORTHO05D001209 1.6e-28 130.6 158 51.9
Cpa.g.sc36.108 Carica papaya HOM05D000924 ORTHO05D001209 2.8e-28 129.8 158 51.3
Haze_17095 Corylus avellana HOM05D000924 ORTHO05D001209 3.6e-28 129.4 163 51.5
Nn6g31594 Nelumbo nucifera HOM05D000924 ORTHO05D001209 3.6e-28 129.4 196 44.9
QL10p013857 Quercus lobata HOM05D000924 ORTHO05D001209 3.6e-28 129.4 150 53.3
Peaxi162Scf00064g01426 Petunia axillaris HOM05D000924 ORTHO05D001209 8.0e-28 128.3 187 43.9
Eucgr.F01825 Eucalyptus grandis HOM05D000924 ORTHO05D001209 1.0e-27 127.9 158 51.3
MD12G1257300 Malus domestica HOM05D000924 ORTHO05D001209 1.0e-27 127.9 164 50.0
Thecc.10G149400 Theobroma cacao HOM05D000924 ORTHO05D001209 1.0e-27 127.9 163 49.1
Duzib128G1905 Durio zibethinus HOM05D000924 ORTHO05D001209 1.4e-27 127.5 158 50.0
DCAR_003081 Daucus carota HOM05D000924 ORTHO05D001209 1.8e-27 127.1 153 50.3
Manes.18G005100 Manihot esculenta HOM05D000924 ORTHO05D001209 1.8e-27 127.1 163 49.1
Sed0004818 Sechium edule HOM05D000924 ORTHO05D001209 1.8e-27 127.1 153 49.7
TWI14G0143 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 1.8e-27 127.1 153 52.3
COL.COLO4_18725 Corchorus olitorius HOM05D000924 ORTHO05D001209 2.3e-27 126.7 163 49.1
Gohir.A10G187300 Gossypium hirsutum HOM05D000924 ORTHO05D001209 2.3e-27 126.7 163 48.5
Gohir.D10G194400 Gossypium hirsutum HOM05D000924 ORTHO05D001209 2.3e-27 126.7 163 48.5
Gorai.011G217300 Gossypium raimondii HOM05D000924 ORTHO05D001209 2.3e-27 126.7 163 48.5
Rhsim06G0001600 Rhododendron simsii HOM05D000924 ORTHO05D001209 3.1e-27 126.3 158 50.0
PSO063G7524 Papaver somniferum HOM05D000924 ORTHO05D001209 4.0e-27 125.9 219 41.1
PGR083G1659 Punica granatum HOM05D000924 ORTHO05D001209 5.2e-27 125.6 179 47.5
Sabra15G0116500 Salix brachista HOM05D000924 ORTHO05D001209 5.2e-27 125.6 153 51.0
ClCG05G006710 Citrullus lanatus HOM05D000924 ORTHO05D001209 6.8e-27 125.2 151 49.0
MELO3C006732.2 Cucumis melo HOM05D000924 ORTHO05D001209 6.8e-27 125.2 151 49.0
CsaV3_3G015340 Cucumis sativus L. HOM05D000924 ORTHO05D001209 6.8e-27 125.2 151 49.0
Dinv32321 Davidia involucrata HOM05D000924 ORTHO05D001209 6.8e-27 125.2 185 45.4
Mapoly0043s0081 Marchantia polymorpha HOM05D000924 ORTHO05D001209 6.8e-27 125.2 220 40.9
Actinidia17090 Actinidia chinensis HOM05D000924 ORTHO05D001209 8.9e-27 124.8 163 48.5
CSS0008681 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 8.9e-27 124.8 153 51.6
Cc02_g28440 Coffea canephora HOM05D000924 ORTHO05D001209 8.9e-27 124.8 159 48.4
Prupe.6G358100 Prunus persica HOM05D000924 ORTHO05D001209 1.2e-26 124.4 164 48.2
ClCG05G013070 Citrullus lanatus HOM05D000924 ORTHO05D001209 2.6e-26 123.2 200 42.0
Lj5A314T76 Lonicera japonica HOM05D000924 ORTHO05D001209 2.6e-26 123.2 158 48.7
Hma1.2p1_0914F.1_g236150 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 3.4e-26 122.9 163 48.5
Potri.015G095500 Populus trichocarpa HOM05D000924 ORTHO05D001209 3.4e-26 122.9 159 49.1
CSS0036316 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 4.4e-26 122.5 153 51.0
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 4.4e-26 122.5 155 49.0
Lsat_1_v5_gn_3_7501 Lactuca sativa HOM05D000924 ORTHO05D001209 5.8e-26 122.1 153 49.0
PGSC0003DMG400030366 Solanum tuberosum HOM05D000924 ORTHO05D001209 5.8e-26 122.1 159 47.8
HanXRQChr17g0533721 Helianthus annuus HOM05D000924 ORTHO05D001209 7.5e-26 121.7 153 49.7
CAN.G1095.6 Capsicum annuum HOM05D000924 ORTHO05D001209 9.8e-26 121.3 153 49.0
Sc15g0004020 Simmondsia chinensis HOM05D000924 ORTHO05D001209 9.8e-26 121.3 158 48.7
RcHm_v2.0_Chr7g0209461 Rosa chinensis HOM05D000924 ORTHO05D001209 1.7e-25 120.6 165 49.1
ATR0605G032 Amborella trichopoda HOM05D000924 ORTHO05D001209 2.2e-25 120.2 146 48.6
CDE06G2318 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 2.2e-25 120.2 157 47.1
FvH4_5g21940 Fragaria vesca HOM05D000924 ORTHO05D001209 2.2e-25 120.2 165 49.1
FAN13G1554 Fragaria x ananassa HOM05D000924 ORTHO05D001209 2.2e-25 120.2 165 49.1
FAN18G2116 Fragaria x ananassa HOM05D000924 ORTHO05D001209 2.2e-25 120.2 165 49.1
THA.LOC104812019 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 2.9e-25 119.8 153 50.3
CANSAT80G1721 Cannabis sativa HOM05D000924 ORTHO05D001209 3.7e-25 119.4 158 48.7
Lsat_1_v5_gn_3_7441 Lactuca sativa HOM05D000924 ORTHO05D001209 3.7e-25 119.4 153 47.7
unitig_26.g9847 Utricularia gibba HOM05D000924 ORTHO05D001209 3.7e-25 119.4 198 42.9
Solyc06g082100.4 Solanum lycopersicum HOM05D000924 ORTHO05D001209 4.9e-25 119.0 159 47.2
Sopen06g033490 Solanum pennellii HOM05D000924 ORTHO05D001209 4.9e-25 119.0 159 47.2
SGA_v2.0_scaffold161G37860 Striga asiatica HOM05D000924 ORTHO05D001209 4.9e-25 119.0 153 48.4
Aa31LG7G5140 Aethionema arabicum HOM05D000924 ORTHO05D001209 6.4e-25 118.6 153 49.0
Aqoxy3G02568 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 6.4e-25 118.6 162 46.3
Sp1g18660 Schrenkiella parvula HOM05D000924 ORTHO05D001209 6.4e-25 118.6 153 49.7
arahy.Tifrunner.gnm1.ann1.JY4JA5 Arachis hypogaea HOM05D000924 ORTHO05D001209 8.3e-25 118.2 163 49.1
TAR381G1514 Trochodendron aralioides HOM05D000924 ORTHO05D001209 8.3e-25 118.2 153 49.7
Migut.C00343 Erythranthe guttata HOM05D000924 ORTHO05D001209 1.1e-24 117.9 154 47.4
Lj5C314G2 Lonicera japonica HOM05D000924 ORTHO05D001209 1.1e-24 117.9 163 46.6
Oeu060274.1 Olea europaea HOM05D000924 ORTHO05D001209 1.1e-24 117.9 158 47.5
MSTRG.1010 Avicennia marina HOM05D000924 ORTHO05D001209 1.9e-24 117.1 153 49.0
FAN08G2720 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.9e-24 117.1 165 48.5
Glyma.08G173500 Glycine max HOM05D000924 ORTHO05D001209 1.9e-24 117.1 158 50.6
SHI31129 Sapria himalayana HOM05D000924 ORTHO05D001209 1.9e-24 117.1 163 46.6
SMO347G0607 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 1.9e-24 117.1 211 39.3
arahy.Tifrunner.gnm1.ann1.1JT8J9 Arachis hypogaea HOM05D000924 ORTHO05D001209 2.4e-24 116.7 158 49.4
arahy.Tifrunner.gnm1.ann1.L2QDU1 Arachis hypogaea HOM05D000924 ORTHO05D001209 2.4e-24 116.7 158 49.4
CARHR021420 Cardamine hirsuta HOM05D000924 ORTHO05D001209 2.4e-24 116.7 153 48.4
Nitab4.5_0002503g0090 Nicotiana tabacum HOM05D000924 ORTHO05D001209 2.4e-24 116.7 159 46.5
Phvul.005G055300 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 2.4e-24 116.7 158 50.6
VMungo1080G0748 Vigna mungo HOM05D000924 ORTHO05D001209 2.4e-24 116.7 158 50.6
Pp3c1_35880 Physcomitrium patens HOM05D000924 ORTHO05D001209 3.2e-24 116.3 212 38.7
Glyma.15G253800 Glycine max HOM05D000924 ORTHO05D001209 4.1e-24 115.9 158 50.0
Aa31LG6G12910 Aethionema arabicum HOM05D000924 ORTHO05D001209 5.4e-24 115.5 153 47.1
BcaB03g14290 Brassica carinata HOM05D000924 ORTHO05D001209 5.4e-24 115.5 153 49.0
CARHR137320 Cardamine hirsuta HOM05D000924 ORTHO05D001209 5.4e-24 115.5 209 36.8
Thhalv10006525m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 5.4e-24 115.5 153 48.4
A02p10320 Brassica napus HOM05D000924 ORTHO05D001209 9.2e-24 114.8 212 40.6
BraA02t06099Z Brassica rapa HOM05D000924 ORTHO05D001209 9.2e-24 114.8 212 40.6
ECA246G0163 Erigeron canadensis HOM05D000924 ORTHO05D001209 9.2e-24 114.8 230 36.5
PSO782G5199 Papaver somniferum HOM05D000924 ORTHO05D001209 9.2e-24 114.8 156 48.1
AL1G33990 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 1.2e-23 114.4 153 47.7
BcaB03g11743 Brassica carinata HOM05D000924 ORTHO05D001209 2.0e-23 113.6 154 46.8
BcaC06g34852 Brassica carinata HOM05D000924 ORTHO05D001209 2.0e-23 113.6 222 40.1
Lj3g0017691 Lotus japonicus HOM05D000924 ORTHO05D001209 2.0e-23 113.6 158 49.4
Lalb_Chr25g0285181 Lupinus albus HOM05D000924 ORTHO05D001209 2.0e-23 113.6 158 48.7
SEGI_01233 Sequoiadendron giganteum HOM05D000924 ORTHO05D001209 2.0e-23 113.6 150 50.0
SEGI_03458 Sequoiadendron giganteum HOM05D000924 ORTHO05D001209 2.0e-23 113.6 150 50.0
A07p15350 Brassica napus HOM05D000924 ORTHO05D001209 2.7e-23 113.2 222 40.1
BraA07t29275Z Brassica rapa HOM05D000924 ORTHO05D001209 2.7e-23 113.2 222 40.1
BraA08t33566Z Brassica rapa HOM05D000924 ORTHO05D001209 2.7e-23 113.2 153 47.1
MD09G1063000 Malus domestica HOM05D000924 ORTHO05D001209 3.5e-23 112.8 161 46.0
Nitab4.5_0000110g0580 Nicotiana tabacum HOM05D000924 ORTHO05D001209 3.5e-23 112.8 163 44.2
Potri.012G097300 Populus trichocarpa HOM05D000924 ORTHO05D001209 3.5e-23 112.8 225 38.2
AT1G20960 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 6.0e-23 112.1 153 47.1
Carub.0001s2043 Capsella rubella HOM05D000924 ORTHO05D001209 7.8e-23 111.7 153 47.1
ClCG11G018370 Citrullus lanatus HOM05D000924 ORTHO05D001209 7.8e-23 111.7 212 38.2
CANSAT78G0159 Cannabis sativa HOM05D000924 ORTHO05D001209 1.0e-22 111.3 224 38.4
Migut.N01909 Erythranthe guttata HOM05D000924 ORTHO05D001209 1.0e-22 111.3 156 44.9
Nitab4.5_0003811g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.0e-22 111.3 159 45.3
Nitab4.5_0003918g0050 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.0e-22 111.3 208 39.4
Zm00001eb328850 Zea mays HOM05D000924 ORTHO05D001209 1.0e-22 111.3 156 45.5
BolC3t15183H Brassica oleracea HOM05D000924 ORTHO05D001209 1.3e-22 110.9 196 40.8
Carub.0004s2461 Capsella rubella HOM05D000924 ORTHO05D001209 1.3e-22 110.9 211 38.9
C03p28130 Brassica napus HOM05D000924 ORTHO05D001209 1.7e-22 110.5 196 40.8
Ca_03699_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 1.7e-22 110.5 158 48.7
Nitab4.5_0005694g0030 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.7e-22 110.5 159 45.3
TAR369G0929 Trochodendron aralioides HOM05D000924 ORTHO05D001209 1.7e-22 110.5 169 45.6
BolC7t42794H Brassica oleracea HOM05D000924 ORTHO05D001209 2.3e-22 110.2 223 39.9
CBR_g70690 Chara braunii HOM05D000924 ORTHO05D001209 2.3e-22 110.2 217 38.2
FAN05G2437 Fragaria x ananassa HOM05D000924 ORTHO05D001209 5.0e-22 109.0 230 36.5
TPR.G25887 Trifolium pratense HOM05D000924 ORTHO05D001209 5.0e-22 109.0 158 48.7
Ah.01g015930 Amaranthus hybridus HOM05D000924 ORTHO05D001209 8.6e-22 108.2 153 45.1
Nitab4.5_0008569g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 8.6e-22 108.2 224 36.6
AL4G40630 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 1.1e-21 107.8 210 38.1
AUR62024846 Chenopodium quinoa HOM05D000924 ORTHO05D001209 1.9e-21 107.1 158 43.0
AUR62032373 Chenopodium quinoa HOM05D000924 ORTHO05D001209 1.9e-21 107.1 158 43.0
BcaC01g05308 Brassica carinata HOM05D000924 ORTHO05D001209 3.3e-21 106.3 185 40.5
BolC2t07803H Brassica oleracea HOM05D000924 ORTHO05D001209 3.3e-21 106.3 212 39.6
FAN09G1765 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.3e-21 106.3 230 36.5
AT2G42270 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 4.3e-21 105.9 210 37.1
EL10Ac2g02545 Beta vulgaris HOM05D000924 ORTHO05D001209 4.3e-21 105.9 153 43.1
Psat2g149120 Pisum sativum HOM05D000924 ORTHO05D001209 4.3e-21 105.9 163 47.2
FvH4_6g00860 Fragaria vesca HOM05D000924 ORTHO05D001209 5.6e-21 105.5 168 44.0
C02p17050 Brassica napus HOM05D000924 ORTHO05D001209 7.3e-21 105.1 212 39.2
TPR.G10336 Trifolium pratense HOM05D000924 ORTHO05D001209 7.3e-21 105.1 158 47.5
Medtr2g064740 Medicago truncatula HOM05D000924 ORTHO05D001209 2.1e-20 103.6 158 46.2
AL5G18660 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 3.6e-20 102.8 222 37.4
CDE07G1660 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 4.7e-20 102.4 157 43.9
FAN14G0455 Fragaria x ananassa HOM05D000924 ORTHO05D001209 4.7e-20 102.4 231 36.8
Nitab4.5_0001515g0080 Nicotiana tabacum HOM05D000924 ORTHO05D001209 8.1e-20 101.7 206 38.3
CAN.G993.32 Capsicum annuum HOM05D000924 ORTHO05D001209 1.1e-19 101.3 144 46.5
BcaC03g14318 Brassica carinata HOM05D000924 ORTHO05D001209 1.8e-19 100.5 212 37.3
Ciclev10004124m.g Citrus clementina HOM05D000924 ORTHO05D001209 7.5e-18 95.1 141 42.6
Thhalv10016123m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 7.5e-18 95.1 150 42.7
HanXRQChr12g0359471 Helianthus annuus HOM05D000924 ORTHO05D001209 1.7e-17 94.0 191 35.6
Os03g0743800 Oryza sativa ssp. japonica HOM05D000924 ORTHO05D001209 1.7e-17 94.0 211 32.2
GSVIVG01010769001 Vitis vinifera HOM05D000924 ORTHO05D001209 2.2e-17 93.6 187 41.2
RcHm_v2.0_Chr2g0166221 Rosa chinensis HOM05D000924 ORTHO05D001209 3.7e-17 92.8 154 41.6
FAN05G4579 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.1e-16 91.3 154 40.9
FAN14G3354 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.2e-16 89.7 145 42.1
Medtr4g011450 Medicago truncatula HOM05D000924 ORTHO05D001209 7.1e-16 88.6 160 38.8
AUR62024847 Chenopodium quinoa HOM05D000924 ORTHO05D001209 9.2e-16 88.2 158 36.7
Solyc06g071620.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 2.3e-14 83.6 248 32.3
FAN09G2563 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.9e-14 82.8 155 40.0
FAN13G2240 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.9e-14 82.8 127 44.1
PRCOL_00003356 Prasinoderma coloniale HOM05D000924 ORTHO05D001209 3.9e-14 82.8 191 34.6
Nitab4.5_0007467g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.5e-13 80.9 158 41.8
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 2.5e-13 80.1 212 31.1
ATR1127G181 Amborella trichopoda HOM05D000924 ORTHO05D001209 4.3e-13 79.3 128 43.0
vmacro14714 Vaccinium macrocarpon HOM05D000924 ORTHO05D001209 9.5e-13 78.2 154 38.3
BcaC05g26004 Brassica carinata HOM05D000924 ORTHO05D001209 3.6e-12 76.3 136 40.4
TPR.G38666 Trifolium pratense HOM05D000924 ORTHO05D001209 1.4e-11 74.3 199 33.7
CSS0020846 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 4.0e-11 72.8 185 34.6
CSS0038722 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 5.2e-11 72.4 156 36.5
Cre17.g744147 Chlamydomonas reinhardtii HOM05D000924 ORTHO05D001209 6.8e-11 72.0 151 37.1
C07p22650 Brassica napus HOM05D000924 ORTHO05D001209 1.2e-10 71.2 180 35.0
SalBow7G0171 Salvia bowleyana HOM05D008298 ORTHO05D010685 7.6e-10 68.6 82 51.2
MCO02G020 Micromonas commoda HOM05D000924 ORTHO05D001209 9.2e-08 61.6 142 35.2


User provided reference genes

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