Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p082994 Quercus lobata HOM05D003639 ORTHO05D004246 1.3e-73 279.6 137 100.0
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 2.9e-14 82.4 172 37.2
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 1.9e-13 79.7 173 35.8
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 1.9e-13 79.7 173 35.8
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 1.9e-13 79.7 173 35.8
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 1.9e-13 79.7 173 36.4
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 2.5e-13 79.3 175 36.0
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 7.2e-13 77.8 175 36.0
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 9.4e-13 77.4 174 35.1
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 1.6e-12 76.6 174 35.1
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 1.6e-12 76.6 173 35.8
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 1.6e-12 76.6 174 35.1
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 1.6e-12 76.6 172 36.0
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 1.6e-12 76.6 173 37.0
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 2.1e-12 76.3 174 35.1
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 2.1e-12 76.3 174 35.1
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 2.7e-12 75.9 172 35.5
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 2.7e-12 75.9 173 37.0
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 2.7e-12 75.9 174 37.4
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 3.6e-12 75.5 173 36.4
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 3.6e-12 75.5 173 37.0
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 4.7e-12 75.1 173 35.8
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 4.7e-12 75.1 173 37.0
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 4.7e-12 75.1 172 35.5
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 4.7e-12 75.1 172 35.5
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 4.7e-12 75.1 172 35.5
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 4.7e-12 75.1 172 35.5
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 6.1e-12 74.7 173 37.0
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 6.1e-12 74.7 172 35.5
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 6.1e-12 74.7 173 36.4
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 1.0e-11 73.9 174 36.2
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 1.0e-11 73.9 171 36.8
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 1.8e-11 73.2 173 34.1
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 1.8e-11 73.2 173 35.8
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 1.8e-11 73.2 172 34.9
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 1.8e-11 73.2 171 36.8
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 2.3e-11 72.8 173 35.3
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 2.3e-11 72.8 173 35.3
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 2.3e-11 72.8 171 35.1
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 3.0e-11 72.4 174 34.5
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 3.0e-11 72.4 174 34.5
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 4.0e-11 72.0 176 33.5
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 4.0e-11 72.0 172 35.5
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 5.2e-11 71.6 173 33.5
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 5.2e-11 71.6 173 34.1
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 6.8e-11 71.2 168 36.9
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 6.8e-11 71.2 173 35.3
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 2.6e-10 69.3 168 34.5
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 2.6e-10 69.3 171 32.7
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 2.6e-10 69.3 165 35.2
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 2.6e-10 69.3 164 35.4
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 4.4e-10 68.6 173 34.7
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 4.4e-10 68.6 175 32.0
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 5.7e-10 68.2 169 33.1
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 5.7e-10 68.2 177 32.8
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 7.5e-10 67.8 170 34.7
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 7.5e-10 67.8 174 32.8
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 7.5e-10 67.8 171 33.9
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 9.8e-10 67.4 171 33.3
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 1.3e-09 67.0 179 31.8
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 1.7e-09 66.6 173 33.5
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 1.7e-09 66.6 175 33.1
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 2.2e-09 66.2 175 33.1
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 2.2e-09 66.2 174 32.2
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 2.8e-09 65.9 175 32.6
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 2.8e-09 65.9 176 32.4
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 3.7e-09 65.5 144 35.4
QL04p089213 Quercus lobata HOM05D003639 ORTHO05D004246 3.7e-09 65.5 46 67.4
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 3.7e-09 65.5 173 32.9
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 6.3e-09 64.7 175 33.1
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 6.3e-09 64.7 173 33.5
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 1.4e-08 63.5 174 31.6
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 1.4e-08 63.5 173 32.4
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 1.8e-08 63.2 172 32.0
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 4.1e-08 62.0 170 32.9
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 7.0e-08 61.2 174 31.0
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 7.0e-08 61.2 173 31.8
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 9.1e-08 60.8 168 32.7
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 9.1e-08 60.8 173 31.8
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 9.1e-08 60.8 173 31.8
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 2.0e-07 59.7 170 31.2
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 2.0e-07 59.7 170 31.2
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 2.0e-07 59.7 170 31.2
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 2.0e-07 59.7 170 31.2
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 2.0e-07 59.7 175 31.4
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 2.0e-07 59.7 161 33.5
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 2.0e-07 59.7 129 38.8
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 3.5e-07 58.9 168 31.5
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 3.5e-07 58.9 174 31.0
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 4.5e-07 58.5 170 31.8
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 4.5e-07 58.5 71 47.9
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 5.9e-07 58.2 71 49.3
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 1.3e-06 57.0 80 43.8
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 2.3e-06 56.2 85 42.4
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 2.3e-06 56.2 85 42.4
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 2.3e-06 56.2 168 30.4
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 2.9e-06 55.8 80 42.5
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 3.8e-06 55.5 80 43.8
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 3.8e-06 55.5 80 43.8
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 5.0e-06 55.1 85 42.4
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 5.0e-06 55.1 85 42.4
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 5.0e-06 55.1 71 47.9
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 6.6e-06 54.7 175 31.4
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 6.6e-06 54.7 71 46.5
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 8.6e-06 54.3 80 43.8
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 8.6e-06 54.3 159 30.8
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 8.6e-06 54.3 159 30.8


User provided reference genes

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