Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p013201 Quercus lobata HOM05D005380 ORTHO05D006601 3.1e-87 325.1 165 100.0
QL11p017903 Quercus lobata HOM05D005380 ORTHO05D006601 2.7e-54 215.7 117 94.0
Cfa000719 Carpinus fangiana HOM05D005380 ORTHO05D006601 5.2e-50 201.4 117 86.3
Haze_06032 Corylus avellana HOM05D005380 ORTHO05D006601 5.2e-50 201.4 117 86.3
CiPaw.10G065000 Carya illinoinensis HOM05D005380 ORTHO05D006601 5.4e-47 191.4 117 81.2
Manes.11G052180 Manihot esculenta HOM05D005380 ORTHO05D006601 1.7e-45 186.4 117 77.8
Dinv01434 Davidia involucrata HOM05D005380 ORTHO05D006601 6.6e-45 184.5 117 78.6
Manes.16G057200 Manihot esculenta HOM05D005380 ORTHO05D006601 8.6e-45 184.1 117 76.1
Atru.chr10.626 Acer truncatum HOM05D005380 ORTHO05D006601 1.1e-44 183.7 117 76.9
Atru.chr10.630_Atru.chr10.631 Acer truncatum HOM05D005380 ORTHO05D006601 1.1e-44 183.7 117 76.9
GSVIVG01013627001 Vitis vinifera HOM05D005380 ORTHO05D006601 4.3e-44 181.8 117 76.1
COL.COLO4_30926 Corchorus olitorius HOM05D005380 ORTHO05D006601 5.6e-44 181.4 117 77.8
Ciclev10014143m.g Citrus clementina HOM05D005380 ORTHO05D006601 9.5e-44 180.6 117 76.1
MD10G1238900 Malus domestica HOM05D005380 ORTHO05D006601 1.2e-43 180.3 117 79.5
Potri.001G081900 Populus trichocarpa HOM05D005380 ORTHO05D006601 1.2e-43 180.3 115 77.4
MBI10_g16336_MAGBIO Magnolia biondii HOM05D005380 ORTHO05D006601 2.1e-43 179.5 117 77.8
MD05G1259300 Malus domestica HOM05D005380 ORTHO05D006601 4.7e-43 178.3 115 80.0
TAR365G0677 Trochodendron aralioides HOM05D005380 ORTHO05D006601 1.1e-42 177.2 117 75.2
Prupe.4G105500 Prunus persica HOM05D005380 ORTHO05D006601 3.1e-42 175.6 117 76.9
Sabra03G0108200 Salix brachista HOM05D005380 ORTHO05D006601 3.1e-42 175.6 117 72.6
Nn1g01426 Nelumbo nucifera HOM05D005380 ORTHO05D006601 5.2e-42 174.9 117 73.5
Thecc.06G135400 Theobroma cacao HOM05D005380 ORTHO05D006601 8.9e-42 174.1 117 74.4
Potri.003G148700 Populus trichocarpa HOM05D005380 ORTHO05D006601 2.0e-41 172.9 117 71.8
TWI09G1549 Tripterygium wilfordii HOM05D005380 ORTHO05D006601 2.0e-41 172.9 117 73.5
Ca_23214_v3 Cicer arietinum L. HOM05D005380 ORTHO05D006601 2.6e-41 172.6 117 73.5
Cpa.g.sc21.91 Carica papaya HOM05D005380 ORTHO05D006601 5.8e-41 171.4 118 72.9
Glyma.03G103900 Glycine max HOM05D005380 ORTHO05D006601 5.8e-41 171.4 125 67.2
Lj3g0005152 Lotus japonicus HOM05D005380 ORTHO05D006601 7.6e-41 171.0 119 71.4
RcHm_v2.0_Chr5g0019211 Rosa chinensis HOM05D005380 ORTHO05D006601 7.6e-41 171.0 117 75.2
CANSAT80G1059 Cannabis sativa HOM05D005380 ORTHO05D006601 1.3e-40 170.2 117 71.8
TPR.G31565 Trifolium pratense HOM05D005380 ORTHO05D006601 1.7e-40 169.9 119 72.3
Glyma.07G119900 Glycine max HOM05D005380 ORTHO05D006601 2.2e-40 169.5 125 67.2
VMungo0331G1684 Vigna mungo HOM05D005380 ORTHO05D006601 2.2e-40 169.5 119 70.6
Duzib192G0856 Durio zibethinus HOM05D005380 ORTHO05D006601 2.9e-40 169.1 117 72.6
CSS0002209 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 3.8e-40 168.7 117 73.5
CSS0007558 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 3.8e-40 168.7 117 73.5
Phvul.010G053600 Phaseolus vulgaris HOM05D005380 ORTHO05D006601 8.4e-40 167.5 119 68.9
ECA234G0325 Erigeron canadensis HOM05D005380 ORTHO05D006601 1.1e-39 167.2 119 70.6
FvH4_3g11790 Fragaria vesca HOM05D005380 ORTHO05D006601 1.4e-39 166.8 117 72.6
Medtr8g012560 Medicago truncatula HOM05D005380 ORTHO05D006601 1.4e-39 166.8 119 71.4
Lalb_Chr07g0194321 Lupinus albus HOM05D005380 ORTHO05D006601 1.9e-39 166.4 119 69.7
arahy.Tifrunner.gnm1.ann1.UEF6CF Arachis hypogaea HOM05D005380 ORTHO05D006601 3.2e-39 165.6 119 68.1
Duzib235G1486 Durio zibethinus HOM05D005380 ORTHO05D006601 3.2e-39 165.6 117 69.2
ECA247G3537 Erigeron canadensis HOM05D005380 ORTHO05D006601 4.1e-39 165.2 119 70.6
FAN21G3255 Fragaria x ananassa HOM05D005380 ORTHO05D006601 4.1e-39 165.2 117 72.6
FAN25G3771 Fragaria x ananassa HOM05D005380 ORTHO05D006601 5.4e-39 164.9 117 71.8
Actinidia12893 Actinidia chinensis HOM05D005380 ORTHO05D006601 1.2e-38 163.7 124 71.8
Lsat_1_v5_gn_4_38401 Lactuca sativa HOM05D005380 ORTHO05D006601 1.6e-38 163.3 119 68.9
arahy.Tifrunner.gnm1.ann1.GT0B0E Arachis hypogaea HOM05D005380 ORTHO05D006601 6.0e-38 161.4 122 66.4
FAN16G1170 Fragaria x ananassa HOM05D005380 ORTHO05D006601 6.0e-38 161.4 117 70.9
vmacro04057 Vaccinium macrocarpon HOM05D005380 ORTHO05D006601 6.0e-38 161.4 118 70.3
Eucgr.E02010 Eucalyptus grandis HOM05D005380 ORTHO05D006601 7.8e-38 161.0 117 69.2
Gohir.D10G048301 Gossypium hirsutum HOM05D005380 ORTHO05D006601 1.3e-37 160.2 119 68.9
Gorai.011G051400 Gossypium raimondii HOM05D005380 ORTHO05D006601 1.3e-37 160.2 119 68.9
Psat4g204440 Pisum sativum HOM05D005380 ORTHO05D006601 3.9e-37 158.7 119 67.2
CsaV3_1G046710 Cucumis sativus L. HOM05D005380 ORTHO05D006601 6.6e-37 157.9 117 68.4
MELO3C021785.2 Cucumis melo HOM05D005380 ORTHO05D006601 1.1e-36 157.1 117 69.2
ClCG01G008980 Citrullus lanatus HOM05D005380 ORTHO05D006601 1.5e-36 156.8 122 68.0
HanXRQChr14g0457361 Helianthus annuus HOM05D005380 ORTHO05D006601 1.9e-36 156.4 119 65.5
Os05g0104100 Oryza sativa ssp. japonica HOM05D005380 ORTHO05D006601 1.9e-36 156.4 119 68.1
PSO170G0871 Papaver somniferum HOM05D005380 ORTHO05D006601 1.9e-36 156.4 117 66.7
Hma1.2p1_1380F.1_g279310 Hydrangea macrophylla HOM05D005380 ORTHO05D006601 2.5e-36 156.0 117 67.5
PSO357G0674 Papaver somniferum HOM05D005380 ORTHO05D006601 7.3e-36 154.5 117 65.8
PGR083G1975 Punica granatum HOM05D005380 ORTHO05D006601 9.6e-36 154.1 124 66.1
Aqoxy5G03588 Aquilegia oxysepala HOM05D005380 ORTHO05D006601 4.7e-35 151.8 117 66.7
Zm00001eb267510 Zea mays HOM05D005380 ORTHO05D006601 1.8e-34 149.8 117 67.5
Nitab4.5_0002174g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 2.4e-34 149.4 117 65.8
Solyc05g015210.4 Solanum lycopersicum HOM05D005380 ORTHO05D006601 3.1e-34 149.1 117 65.8
Sopen05g010460 Solanum pennellii HOM05D005380 ORTHO05D006601 3.1e-34 149.1 117 66.7
Migut.M01950 Erythranthe guttata HOM05D005380 ORTHO05D006601 5.2e-34 148.3 118 67.8
Oeu000486.1 Olea europaea HOM05D005380 ORTHO05D006601 6.9e-34 147.9 129 63.6
Rhsim13G0198600 Rhododendron simsii HOM05D005380 ORTHO05D006601 1.2e-33 147.1 116 65.5
DCAR_003768 Daucus carota HOM05D005380 ORTHO05D006601 1.5e-33 146.7 117 65.8
ATR0743G092 Amborella trichopoda HOM05D005380 ORTHO05D006601 2.6e-33 146.0 117 65.0
Nitab4.5_0005179g0030 Nicotiana tabacum HOM05D005380 ORTHO05D006601 4.4e-33 145.2 117 63.2
CAN.G890.49 Capsicum annuum HOM05D005380 ORTHO05D006601 7.6e-33 144.4 117 63.2
Sc10g0009350 Simmondsia chinensis HOM05D005380 ORTHO05D006601 1.7e-32 143.3 117 62.4
AUR62043348 Chenopodium quinoa HOM05D005380 ORTHO05D006601 3.8e-32 142.1 117 61.5
Hund06739 Selenicereus undatus HOM05D005380 ORTHO05D006601 3.8e-32 142.1 117 62.4
EL10Ac8g19470 Beta vulgaris HOM05D005380 ORTHO05D006601 4.9e-32 141.7 117 62.4
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 1.1e-31 140.6 125 56.0
HPP92_023728 Vanilla planifolia HOM05D005380 ORTHO05D006601 1.9e-31 139.8 117 63.2
Sed0014613 Sechium edule HOM05D005380 ORTHO05D006601 2.4e-31 139.4 117 64.1
AUR62042012 Chenopodium quinoa HOM05D005380 ORTHO05D006601 4.2e-31 138.7 117 58.1
THA.LOC104810347 Tarenaya hassleriana HOM05D005380 ORTHO05D006601 9.3e-31 137.5 119 58.8
Sp1g20340 Schrenkiella parvula HOM05D005380 ORTHO05D006601 6.0e-30 134.8 118 58.5
Thhalv10006692m.g Eutrema salsugineum HOM05D005380 ORTHO05D006601 1.0e-29 134.0 118 57.6
Aa31LG7G6850 Aethionema arabicum HOM05D005380 ORTHO05D006601 1.3e-29 133.7 118 58.5
AL1G36400 Arabidopsis lyrata HOM05D005380 ORTHO05D006601 1.3e-29 133.7 118 57.6
AT1G22860 Arabidopsis thaliana HOM05D005380 ORTHO05D006601 1.7e-29 133.3 118 56.8
Peaxi162Scf00128g01143 Petunia axillaris HOM05D005380 ORTHO05D006601 2.3e-29 132.9 117 61.5
unitig_747.g21990 Utricularia gibba HOM05D005380 ORTHO05D006601 3.9e-29 132.1 117 60.7
Carub.0001s2236 Capsella rubella HOM05D005380 ORTHO05D006601 1.9e-28 129.8 118 55.9
BcaB07g32281 Brassica carinata HOM05D005380 ORTHO05D006601 3.3e-28 129.0 118 55.9
BcaC05g26192 Brassica carinata HOM05D005380 ORTHO05D006601 3.3e-28 129.0 118 55.9
A09p41900 Brassica napus HOM05D005380 ORTHO05D006601 3.3e-28 129.0 118 55.9
C05p21950 Brassica napus HOM05D005380 ORTHO05D006601 3.3e-28 129.0 118 55.9
BolC5t30892H Brassica oleracea HOM05D003679 ORTHO05D004265 3.3e-28 129.0 118 55.9
MSTRG.12176 Avicennia marina HOM05D005380 ORTHO05D006601 4.3e-28 128.6 118 60.2
BraA09t39678Z Brassica rapa HOM05D005380 ORTHO05D006601 9.6e-28 127.5 118 55.1
CARHR023210 Cardamine hirsuta HOM05D005380 ORTHO05D006601 1.3e-27 127.1 118 55.1
Lj1A1141T73 Lonicera japonica HOM05D005380 ORTHO05D006601 1.3e-27 127.1 91 73.6
Cc09_g06540 Coffea canephora HOM05D005380 ORTHO05D006601 8.1e-27 124.4 117 60.7
SalBow8G2602 Salvia bowleyana HOM05D005380 ORTHO05D006601 2.4e-26 122.9 97 64.9
SalBow8G4959 Salvia bowleyana HOM05D005380 ORTHO05D006601 2.4e-26 122.9 97 64.9
SGA_v2.0_scaffold223G42899 Striga asiatica HOM05D005380 ORTHO05D006601 2.4e-26 122.9 109 59.6
CDE02G1822 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 2.1e-22 109.8 118 50.0
SEGI_33229 Sequoiadendron giganteum HOM05D005380 ORTHO05D006601 7.6e-17 91.3 118 46.6
CSS0038991 Camellia sinensis var. sinensis HOM05D005380 ORTHO05D006601 1.4e-15 87.0 51 78.4
BcaNung06594 Brassica carinata HOM05D005380 ORTHO05D006601 4.6e-14 82.0 117 44.4
CDE04G2683 Ceratophyllum demersum HOM05D005380 ORTHO05D006601 5.1e-13 78.6 100 42.0
Pp3c6_25240 Physcomitrium patens HOM05D005380 ORTHO05D006601 8.7e-13 77.8 119 39.5
Mapoly0029s0138 Marchantia polymorpha HOM05D005380 ORTHO05D006601 4.3e-12 75.5 116 41.4
AagrBONN_evm.TU.Sc2ySwM_362.853 Anthoceros agrestis HOM05D005380 ORTHO05D006601 2.9e-08 62.8 103 35.9


User provided reference genes

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