Gene: Cc09_g06540

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc09_g06540
  • Transcript Identifier Cc09_g06540.1
  • Gene Type Coding gene
  • Location chr9 : 7485129-7503544 : positive

Gene Family Information

  • ID HOM05D005380
  • #Genes/#Species 141/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q3UR70
  • UniProtKB B9SBC2
  • UniProtKB A4IG72
  • UniProtKB Q8WUH2
  • UniProtKB B9GY47
  • UniProtKB E0CT98
  • id GSCOCG00005105001

Descriptions

  • Description Vacuolar sorting protein 39
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0010015
ISO
PLAZA Integrative Orthologyroot morphogenesis AT1G22860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G22860
GO:0033263
ISO
PLAZA Integrative OrthologyCORVET complex AT1G22860
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G22860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019452 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1
IPR001180 Citron homology (CNH) domain
IPR032914 Vam6/VPS39/TRAP1 family
IPR036322 WD40-repeat-containing domain superfamily
IPR019453 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
Mapman id Description
22.3.4.9.7 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.CORVET-specific component VPS3