Gene: COL.COLO4_30926

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30926
  • Transcript Identifier COL.rna29641
  • Gene Type Coding gene
  • Location AWUE01020797.1 : 33877-40582 : positive

Gene Family Information

  • ID HOM05D005380
  • #Genes/#Species 141/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna29641
  • GenBank OMO65916.1
  • id gene30898
  • gene_name COLO4_30926
  • uniprot A0A1R3H6R2

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0010015
ISO
PLAZA Integrative Orthologyroot morphogenesis AT1G22860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G22860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G22860
GO:0033263
ISO
PLAZA Integrative OrthologyCORVET complex AT1G22860
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G22860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019453 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2
IPR019452 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1
IPR032914 Vam6/VPS39/TRAP1 family
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
Mapman id Description
22.3.4.9.7 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.CORVET-specific component VPS3