Gene: Solyc05g015210.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g015210.4
  • Transcript Identifier Solyc05g015210.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 10097607-10114838 : positive

Gene Family Information

  • ID HOM05D005380
  • #Genes/#Species 141/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g015210.4.1
  • uniprot A0A3Q7GG52
  • gene_id Solyc05g015210

Descriptions

  • Description transforming growth factor-beta receptor-associated protein 1 (AHRD V3.3 *-* A0A2I4GBN0_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006914
IBA
GOA Databaseautophagy
GO:0034058
IBA
GOA Databaseendosomal vesicle fusion
GO:0010015
ISO
PLAZA Integrative Orthologyroot morphogenesis AT1G22860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G22860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IBA
GOA Databasemembrane
GO:0005737
IBA
GOA Databasecytoplasm
GO:0033263
ISO
PLAZA Integrative OrthologyCORVET complex AT1G22860
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G22860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032914 Vam6/VPS39/TRAP1 family
IPR019452 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1
Mapman id Description
22.3.4.9.7 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.CORVET-specific component VPS3