Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p008924 Quercus lobata HOM05D001937 ORTHO05D003828 1.9e-80 302.8 187 100.0
QL12p036527 Quercus lobata HOM05D001937 ORTHO05D003828 1.9e-80 302.8 187 100.0
QL03p022329 Quercus lobata HOM05D001937 ORTHO05D003828 1.8e-75 286.2 214 81.8
QL11p029100 Quercus lobata HOM05D001937 ORTHO05D003828 1.7e-73 279.6 214 80.4
QL02p062665 Quercus lobata HOM05D001937 ORTHO05D003828 3.8e-73 278.5 181 97.2
QL06p020738 Quercus lobata HOM05D001937 ORTHO05D003828 3.8e-73 278.5 181 97.2
QL03p072736 Quercus lobata HOM05D001937 ORTHO05D003828 4.2e-72 275.0 214 78.0
QL03p060281 Quercus lobata HOM05D001937 ORTHO05D003828 1.2e-71 273.5 214 79.0
QL11p053735 Quercus lobata HOM05D001937 ORTHO05D003828 1.2e-71 273.5 214 78.5
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 2.2e-60 236.1 214 62.6
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 5.0e-57 224.9 214 66.8
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 7.2e-56 221.1 214 66.8
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 2.3e-46 189.5 222 58.1
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 6.8e-46 188.0 223 56.5
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 7.5e-45 184.5 217 60.8
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 1.3e-44 183.7 215 58.1
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.1e-43 180.6 216 58.8
Sed0011905 Sechium edule HOM05D001937 ORTHO05D003828 1.4e-43 180.3 215 57.2
QL12p030812 Quercus lobata HOM05D001937 ORTHO05D003828 7.0e-43 177.9 168 68.5
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 9.1e-43 177.6 212 52.4
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 9.1e-43 177.6 217 57.1
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 9.1e-43 177.6 212 57.5
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 2.0e-42 176.4 211 53.6
Dinv15990 Davidia involucrata HOM05D001937 ORTHO05D003828 2.7e-42 176.0 222 55.0
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 4.5e-42 175.3 212 57.1
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 5.9e-42 174.9 215 55.8
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 1.0e-41 174.1 215 56.7
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 1.3e-41 173.7 216 61.6
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 1.7e-41 173.3 228 55.3
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 1.7e-41 173.3 215 55.8
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 2.9e-41 172.6 212 51.4
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 5.0e-41 171.8 220 52.3
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.1e-40 170.6 224 51.3
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 5.6e-40 168.3 212 55.7
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 5.6e-40 168.3 217 55.8
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 7.2e-40 167.9 228 54.4
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 7.2e-40 167.9 224 54.0
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 9.5e-40 167.5 216 55.6
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 9.5e-40 167.5 228 54.4
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 1.2e-39 167.2 223 52.9
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 2.8e-39 166.0 214 54.7
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.8e-39 166.0 216 55.6
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 4.7e-39 165.2 217 52.5
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 1.4e-38 163.7 220 50.5
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 3.0e-38 162.5 207 51.2
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 3.0e-38 162.5 223 53.4
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 6.8e-38 161.4 223 53.4
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 8.9e-38 161.0 216 47.7
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 2.0e-37 159.8 216 54.6
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 4.4e-37 158.7 222 46.4
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 5.7e-37 158.3 217 48.4
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 9.8e-37 157.5 216 53.7
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 1.3e-36 157.1 223 51.6
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 1.3e-36 157.1 223 51.6
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 2.9e-36 156.0 212 51.4
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 4.9e-36 155.2 221 47.5
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 6.4e-36 154.8 184 54.3
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 6.4e-36 154.8 193 57.0
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 8.3e-36 154.5 223 51.1
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 1.1e-35 154.1 210 47.6
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 1.4e-35 153.7 210 47.6
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 2.4e-35 152.9 216 48.1
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 2.4e-35 152.9 212 48.6
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 7.0e-35 151.4 215 46.5
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 2.0e-34 149.8 223 46.2
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 4.6e-34 148.7 222 46.8
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 1.0e-33 147.5 211 49.8
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 1.3e-33 147.1 221 50.2
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 1.7e-33 146.7 216 52.3
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 1.7e-33 146.7 208 54.8
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 2.3e-33 146.4 221 46.2
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 5.0e-33 145.2 214 46.7
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 6.6e-33 144.8 186 50.5
Solyc07g006820.4 Solanum lycopersicum HOM05D001937 ORTHO05D003828 8.6e-33 144.4 186 50.5
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 2.5e-32 142.9 88 87.5
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 2.5e-32 142.9 221 43.4
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 2.5e-32 142.9 223 49.3
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 5.6e-32 141.7 213 46.5
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 1.2e-31 140.6 214 45.8
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 1.6e-31 140.2 90 83.3
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 1.6e-31 140.2 211 50.2
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 1.6e-31 140.2 90 85.6
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 2.1e-31 139.8 215 45.1
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 2.8e-31 139.4 211 49.3
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 3.6e-31 139.0 90 85.6
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 3.6e-31 139.0 90 85.6
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 3.6e-31 139.0 235 42.6
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 4.7e-31 138.7 222 48.2
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 8.0e-31 137.9 90 81.1
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 1.0e-30 137.5 90 81.1
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 1.8e-30 136.7 90 83.3
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 2.3e-30 136.3 192 49.5
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 6.8e-30 134.8 91 79.1
Atru.chr3.3791 Acer truncatum HOM05D001937 ORTHO05D003828 1.2e-29 134.0 91 82.4
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 1.2e-29 134.0 87 83.9
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 1.2e-29 134.0 219 43.8
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 2.6e-29 132.9 224 48.2
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 2.6e-29 132.9 224 48.2
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 2.6e-29 132.9 222 47.3
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 3.4e-29 132.5 222 48.2
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 4.4e-29 132.1 219 47.9
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 5.8e-29 131.7 224 47.8
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 1.3e-28 130.6 224 47.3
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 1.3e-28 130.6 195 47.2
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 1.7e-28 130.2 222 47.7
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 1.7e-28 130.2 87 81.6
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 3.7e-28 129.0 221 47.1
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 6.4e-28 128.3 220 46.8
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 1.4e-27 127.1 91 78.0
Os06g0645800 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D003828 1.9e-27 126.7 91 74.7
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 4.1e-27 125.6 93 78.5
SEGI_20322 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 5.4e-27 125.2 90 75.6
Pp3c14_1870 Physcomitrium patens HOM05D001937 ORTHO05D003828 1.7e-25 120.2 217 42.4
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 5.0e-25 118.6 219 45.7
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 1.9e-24 116.7 90 73.3
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 1.9e-24 116.7 90 73.3
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 1.9e-24 116.7 90 73.3
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 1.9e-24 116.7 90 73.3
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 1.9e-24 116.7 90 73.3
Mapoly0010s0177 Marchantia polymorpha HOM05D001937 ORTHO05D003828 5.6e-24 115.2 215 43.3
AagrBONN_evm.TU.Sc2ySwM_117.3403 Anthoceros agrestis HOM05D001937 ORTHO05D003828 9.5e-24 114.4 91 64.8
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 6.2e-23 111.7 90 71.1
Pp3c10_350 Physcomitrium patens HOM05D001937 ORTHO05D003828 1.4e-22 110.5 214 43.9
Aqoxy3G01594 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 3.1e-22 109.4 87 69.0
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 4.0e-22 109.0 92 67.4
HPP92_017202 Vanilla planifolia HOM05D001937 ORTHO05D003828 5.8e-21 105.1 72 80.6
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 2.2e-20 103.2 86 67.4
RcHm_v2.0_Chr5g0013481 Rosa chinensis HOM05D001937 ORTHO05D003828 2.1e-18 96.7 191 41.9
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 1.7e-17 93.6 222 42.3
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 7.3e-16 88.2 89 60.7
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 6.8e-14 81.6 86 58.1
CARHR094480 Cardamine hirsuta HOM05D001937 ORTHO05D003828 2.7e-10 69.7 46 78.3
CBR_g2821 Chara braunii HOM05D001937 ORTHO05D003828 2.3e-09 66.6 94 45.7
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 5.1e-09 65.5 237 30.4
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 5.1e-09 65.5 65 64.6
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 5.1e-09 65.5 164 37.8
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 6.6e-09 65.1 52 73.1
Mapoly0048s0004 Marchantia polymorpha HOM05D001937 ORTHO05D003828 3.6e-07 59.3 177 31.1


User provided reference genes

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