Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p063402 Quercus lobata HOM05D001988 ORTHO05D004985 0.0e+00 1439.5 732 100.0
QL03p064038 Quercus lobata HOM05D001988 ORTHO05D004985 0.0e+00 1436.0 732 99.7
Cfa008981 Carpinus fangiana HOM05D001988 ORTHO05D004985 1.4e-293 1012.7 739 71.2
Haze_12013 Corylus avellana HOM05D001988 ORTHO05D004985 6.1e-276 954.1 872 60.8
CiPaw.05G135300 Carya illinoinensis HOM05D001988 ORTHO05D004985 9.2e-248 860.5 596 75.7
CANSAT54G1389 Cannabis sativa HOM05D001988 ORTHO05D004985 1.9e-229 799.7 746 56.4
Eucgr.B03445 Eucalyptus grandis HOM05D001988 ORTHO05D004985 1.6e-228 796.6 736 57.9
Prupe.1G174900 Prunus persica HOM05D001988 ORTHO05D004985 4.0e-227 792.0 740 57.7
Manes.01G185700 Manihot esculenta HOM05D001988 ORTHO05D004985 2.0e-226 789.6 751 57.1
Actinidia19875 Actinidia chinensis HOM05D001988 ORTHO05D004985 5.8e-226 788.1 741 57.9
Glyma.11G111300 Glycine max HOM05D001988 ORTHO05D004985 2.9e-225 785.8 743 56.8
MD04G1025400 Malus domestica HOM05D001988 ORTHO05D004985 3.0e-222 775.8 720 57.9
Ciclev10030768m.g Citrus clementina HOM05D001988 ORTHO05D004985 6.2e-220 768.1 765 55.4
ClCG11G010950 Citrullus lanatus HOM05D001988 ORTHO05D004985 1.1e-216 757.3 749 56.3
vmacro01260 Vaccinium macrocarpon HOM05D001988 ORTHO05D004985 2.4e-216 756.1 739 55.9
Phvul.011G039300 Phaseolus vulgaris HOM05D001988 ORTHO05D004985 4.2e-216 755.4 744 55.8
Rhsim12G0063800 Rhododendron simsii HOM05D001988 ORTHO05D004985 4.6e-215 751.9 744 55.1
VMungo1127G0715 Vigna mungo HOM05D001988 ORTHO05D004985 6.0e-215 751.5 750 54.7
FAN21G2649 Fragaria x ananassa HOM05D001988 ORTHO05D004985 2.5e-213 746.1 771 54.9
Cpa.g.sc128.24 Carica papaya HOM05D001988 ORTHO05D004985 7.3e-213 744.6 735 54.1
Sed0003814 Sechium edule HOM05D001988 ORTHO05D004985 9.6e-213 744.2 748 57.5
FvH4_3g26291 Fragaria vesca HOM05D001988 ORTHO05D004985 9.0e-211 737.6 771 54.2
GSVIVG01019982001 Vitis vinifera HOM05D001988 ORTHO05D004985 3.4e-210 735.7 741 54.8
Duzib251G0871 Durio zibethinus HOM05D001988 ORTHO05D004985 4.5e-210 735.3 736 53.7
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 7.6e-210 734.6 771 54.1
CSS0030030 Camellia sinensis var. sinensis HOM05D001988 ORTHO05D004985 4.6e-207 725.3 745 55.0
Thecc.02G346500 Theobroma cacao HOM05D001988 ORTHO05D004985 2.3e-206 723.0 739 54.1
MELO3C008752.2 Cucumis melo HOM05D001988 ORTHO05D004985 2.5e-205 719.5 757 53.0
Sabra10G0129300 Salix brachista HOM05D001988 ORTHO05D004985 3.7e-204 715.7 753 51.7
FAN25G3604 Fragaria x ananassa HOM05D001988 ORTHO05D006298 4.8e-204 715.3 771 53.4
Lj3g0010541 Lotus japonicus HOM05D001988 ORTHO05D004985 4.5e-202 708.8 737 52.4
PGR102G2417 Punica granatum HOM05D001988 ORTHO05D004985 5.5e-200 701.8 745 53.2
Ca_20931_v3 Cicer arietinum L. HOM05D001988 ORTHO05D004985 9.3e-200 701.0 750 52.9
Gorai.009G324500 Gossypium raimondii HOM05D001988 ORTHO05D004985 1.6e-199 700.3 745 51.9
Gohir.D05G304800 Gossypium hirsutum HOM05D001988 ORTHO05D004985 3.5e-199 699.1 741 52.0
Nn4g23157 Nelumbo nucifera HOM05D001988 ORTHO05D004985 1.3e-198 697.2 709 56.4
arahy.Tifrunner.gnm1.ann1.8UN484 Arachis hypogaea HOM05D001988 ORTHO05D004985 3.0e-198 696.0 759 51.0
arahy.Tifrunner.gnm1.ann1.41IR6N Arachis hypogaea HOM05D001988 ORTHO05D004985 5.1e-198 695.3 759 50.7
arahy.Tifrunner.gnm1.ann1.AY0VQT Arachis hypogaea HOM05D001988 ORTHO05D004985 1.5e-197 693.7 759 50.9
Lj8A318G47 Lonicera japonica HOM05D001988 ORTHO05D004985 5.8e-194 681.8 718 51.8
vmacro01166 Vaccinium macrocarpon HOM05D001988 ORTHO05D004985 2.9e-193 679.5 743 52.1
Lalb_Chr14g0368981 Lupinus albus HOM05D001988 ORTHO05D004985 7.1e-192 674.9 719 54.2
Medtr4g057650 Medicago truncatula HOM05D001988 ORTHO05D004985 3.5e-191 672.5 739 50.2
FAN25G3456 Fragaria x ananassa HOM05D001988 ORTHO05D004985 5.1e-190 668.7 734 53.5
Gohir.A05G183600 Gossypium hirsutum HOM05D001988 ORTHO05D004985 7.4e-189 664.8 748 50.4
CsaV3_2G009530 Cucumis sativus L. HOM05D001988 ORTHO05D004985 2.4e-187 659.8 635 58.7
Psat7g139200 Pisum sativum HOM05D001988 ORTHO05D004985 7.7e-186 654.8 732 50.4
TWI53G0339 Tripterygium wilfordii HOM05D001988 ORTHO05D004985 2.5e-184 649.8 709 51.9
TPR.G27077 Trifolium pratense HOM05D001988 ORTHO05D004985 1.5e-181 640.6 733 50.2
Hund05880 Selenicereus undatus HOM05D001988 ORTHO05D004985 4.1e-179 632.5 745 49.0
Medtr4g071660 Medicago truncatula HOM05D001988 ORTHO05D004985 7.7e-178 628.2 720 49.2
AUR62005788 Chenopodium quinoa HOM05D001988 ORTHO05D004985 2.2e-172 610.1 747 47.1
HanXRQChr09g0255131 Helianthus annuus HOM05D001988 ORTHO05D004985 3.5e-170 602.8 725 48.7
HanXRQChr05g0145521 Helianthus annuus HOM05D001988 ORTHO05D004985 4.5e-170 602.4 742 48.0
ECA248G0899 Erigeron canadensis HOM05D001988 ORTHO05D004985 1.7e-169 600.5 747 46.9
Lsat_1_v5_gn_5_156781 Lactuca sativa HOM05D001988 ORTHO05D004985 2.5e-168 596.7 742 47.4
THA.LOC104805159 Tarenaya hassleriana HOM05D001988 ORTHO05D004985 4.2e-168 595.9 735 46.3
EL10Ac6g13205 Beta vulgaris HOM05D001988 ORTHO05D004985 5.5e-168 595.5 754 46.6
SHI13475 Sapria himalayana HOM05D001988 ORTHO05D004985 3.6e-167 592.8 711 47.0
Nitab4.5_0007649g0010 Nicotiana tabacum HOM05D001988 ORTHO05D004985 4.7e-167 592.4 719 47.4
Lsat_1_v5_gn_8_100701 Lactuca sativa HOM05D001988 ORTHO05D004985 1.4e-166 590.9 726 47.9
Nitab4.5_0000428g0180 Nicotiana tabacum HOM05D001988 ORTHO05D004985 3.3e-165 586.3 714 47.5
RcHm_v2.0_Chr5g0048641 Rosa chinensis HOM05D001988 ORTHO05D004985 5.7e-165 585.5 565 57.9
Peaxi162Scf00217g00713 Petunia axillaris HOM05D001988 ORTHO05D004985 7.4e-165 585.1 712 47.8
PGSC0003DMG401018705 Solanum tuberosum HOM05D001988 ORTHO05D004985 4.8e-164 582.4 720 46.4
Solyc11g071540.2 Solanum lycopersicum HOM05D001988 ORTHO05D004985 1.8e-163 580.5 720 46.8
RcHm_v2.0_Chr7g0220021 Rosa chinensis HOM05D001988 ORTHO05D004985 4.1e-163 579.3 565 57.2
EL10Ac9g22126 Beta vulgaris HOM05D001988 ORTHO05D004985 5.3e-163 578.9 798 44.1
CAN.G439.30 Capsicum annuum HOM05D001988 ORTHO05D004985 1.6e-162 577.4 721 47.0
MSTRG.27418 Avicennia marina HOM05D001988 ORTHO05D004985 2.0e-162 577.0 739 45.3
TAR629G1399 Trochodendron aralioides HOM05D001988 ORTHO05D004985 3.5e-162 576.2 528 59.3
Cc09_g03970 Coffea canephora HOM05D001988 ORTHO05D004985 1.0e-161 574.7 709 46.7
Sopen11g029230 Solanum pennellii HOM05D001988 ORTHO05D004985 2.2e-161 573.5 720 46.0
Migut.F02100 Erythranthe guttata HOM05D001988 ORTHO05D004985 8.0e-159 565.1 728 45.6
Ah.05g179340 Amaranthus hybridus HOM05D001988 ORTHO05D004985 3.7e-156 556.2 754 43.2
TPR.G16225 Trifolium pratense HOM05D001988 ORTHO05D004985 6.3e-156 555.4 730 44.8
DCAR_007151 Daucus carota HOM05D001988 ORTHO05D004985 1.2e-154 551.2 723 44.1
Aqoxy1G01101 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 1.5e-152 544.3 730 44.4
Medtr5g067430 Medicago truncatula HOM05D001988 ORTHO05D004985 1.5e-152 544.3 722 45.8
Lsat_1_v5_gn_4_55321 Lactuca sativa HOM05D001988 ORTHO05D004985 3.2e-152 543.1 742 44.9
Aa31LG2G7390 Aethionema arabicum HOM05D001988 ORTHO05D004985 1.0e-150 538.1 753 43.6
ECA234G0637 Erigeron canadensis HOM05D001988 ORTHO05D004985 1.4e-150 537.7 724 44.2
SGA_v2.0_scaffold58G20462 Striga asiatica HOM05D001988 ORTHO05D004985 5.2e-150 535.8 734 42.9
Sopen09g001990 Solanum pennellii HOM05D001988 ORTHO05D004985 1.8e-147 527.3 713 44.0
SalBow1G3615 Salvia bowleyana HOM05D001988 ORTHO05D004985 2.4e-147 526.9 710 47.0
Solyc09g007120.4 Solanum lycopersicum HOM05D001988 ORTHO05D004985 2.0e-146 523.9 713 44.0
AUR62028773 Chenopodium quinoa HOM05D001988 ORTHO05D004985 2.7e-146 523.5 688 46.1
Sc11g0001930 Simmondsia chinensis HOM05D001988 ORTHO05D004985 2.9e-145 520.0 752 42.3
Carub.0005s0183 Capsella rubella HOM05D001988 ORTHO05D004985 3.3e-144 516.5 728 43.3
AL5G12570 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 1.2e-143 514.6 734 42.8
Dinv16646 Davidia involucrata HOM05D001988 ORTHO05D004985 6.1e-143 512.3 430 62.1
AT2G02955 Arabidopsis thaliana HOM05D001988 ORTHO05D004985 2.3e-137 493.8 736 41.8
Eucgr.B03444 Eucalyptus grandis HOM05D001988 ORTHO05D004985 3.9e-137 493.0 471 57.5
Hma1.2p1_0265F.1_g106750 Hydrangea macrophylla HOM05D001988 ORTHO05D004985 2.6e-133 480.3 433 55.7
Oeu037938.2 Olea europaea HOM05D001988 ORTHO05D004985 2.2e-132 477.2 507 52.7
Sp7g05500 Schrenkiella parvula HOM05D001988 ORTHO05D004985 6.4e-132 475.7 742 41.4
Migut.I00421 Erythranthe guttata HOM05D001988 ORTHO05D004985 2.7e-130 470.3 732 39.8
Thhalv10027666m.g Eutrema salsugineum HOM05D001988 ORTHO05D004985 8.6e-129 465.3 716 41.1
BolC8t52776H Brassica oleracea HOM05D001988 ORTHO05D004985 1.5e-128 464.5 731 41.2
C08p52490 Brassica napus HOM05D001988 ORTHO05D004985 1.9e-128 464.2 728 40.9
BraA09t42140Z Brassica rapa HOM05D001988 ORTHO05D004985 5.6e-128 462.6 728 39.8
A09p68050 Brassica napus HOM05D001988 ORTHO05D004985 9.5e-128 461.8 728 40.7
unitig_60.g25620 Utricularia gibba HOM05D001988 ORTHO05D004985 1.6e-127 461.1 691 39.8
BcaC07g42212 Brassica carinata HOM05D001988 ORTHO05D004985 4.0e-126 456.4 725 40.1
PSO017G3571 Papaver somniferum HOM05D001988 ORTHO05D004985 1.1e-123 448.4 718 39.0
CDE07G0941 Ceratophyllum demersum HOM05D001988 ORTHO05D004985 6.0e-122 442.6 580 47.8
AL6G52060 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 1.2e-119 434.9 704 39.9
PSO063G4641 Papaver somniferum HOM05D001988 ORTHO05D004985 2.1e-119 434.1 683 39.7
Potri.010G169500 Populus trichocarpa HOM05D001988 ORTHO05D004985 2.1e-119 434.1 432 54.9
HPP92_021577 Vanilla planifolia HOM05D001988 ORTHO05D004985 4.4e-117 426.4 721 38.1
MBI19_g09828_MAGBIO Magnolia biondii HOM05D001988 ORTHO05D004985 7.8e-114 415.6 543 47.3
Atru.chr11.1785 Acer truncatum HOM05D001988 ORTHO05D004985 2.0e-109 401.0 371 59.6
Carub.0006s3640 Capsella rubella HOM05D001988 ORTHO05D004985 1.3e-108 398.3 610 41.3
SEGI_17598 Sequoiadendron giganteum HOM05D001988 ORTHO05D004985 1.7e-105 387.9 738 34.8
SEGI_28471 Sequoiadendron giganteum HOM05D001988 ORTHO05D004985 1.1e-102 378.6 733 35.6
COL.COLO4_23013 Corchorus olitorius HOM05D001988 ORTHO05D004985 5.3e-102 376.3 739 35.9
CARHR145370 Cardamine hirsuta HOM05D001988 ORTHO05D004985 7.6e-101 372.5 502 44.0
AUR62008859 Chenopodium quinoa HOM05D001988 ORTHO05D004985 2.4e-99 367.5 380 52.4
Zm00001eb284870 Zea mays HOM05D001988 ORTHO05D004985 7.3e-96 355.9 592 37.5
Oeu007681.1 Olea europaea HOM05D001988 ORTHO05D004985 1.2e-90 338.6 305 58.4
Thhalv10004418m.g Eutrema salsugineum HOM05D001988 ORTHO05D004985 6.7e-81 306.2 379 45.4
arahy.Tifrunner.gnm1.ann1.N3HM5N Arachis hypogaea HOM05D001988 ORTHO05D004985 3.3e-80 303.9 404 44.1
Hund25598 Selenicereus undatus HOM05D001988 ORTHO05D004985 3.1e-78 297.4 552 37.1
Pp3c9_8400 Physcomitrium patens HOM05D001988 ORTHO05D004985 7.7e-69 266.2 724 28.9
Mapoly0075s0087 Marchantia polymorpha HOM05D001988 ORTHO05D004985 5.3e-62 243.4 633 30.2
ATR0782G208 Amborella trichopoda HOM05D001988 ORTHO05D004985 4.5e-61 240.4 397 40.6
AagrBONN_evm.TU.Sc2ySwM_362.1334 Anthoceros agrestis HOM05D001988 ORTHO05D004985 3.0e-57 227.6 627 27.0
PGSC0003DMG400002020 Solanum tuberosum HOM05D001988 ORTHO05D004985 5.7e-56 223.4 164 65.2
Atru.chr11.1786 Acer truncatum HOM05D001988 ORTHO05D004985 2.2e-47 194.9 142 64.1
RcHm_v2.0_Chr7g0220011 Rosa chinensis HOM05D001988 ORTHO05D004985 1.2e-45 189.1 122 73.0
Aqoxy5G02833 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 1.7e-44 185.3 237 44.7
RcHm_v2.0_Chr5g0048631 Rosa chinensis HOM05D001988 ORTHO05D004985 4.2e-43 180.6 122 71.3
Actinidia31897 Actinidia chinensis HOM05D001988 ORTHO05D004985 3.6e-42 177.6 246 44.7
Aqoxy5G02832 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 3.6e-42 177.6 262 45.0
Medtr4g071850 Medicago truncatula HOM05D001988 ORTHO05D004985 2.3e-41 174.9 205 43.9
Hund25529 Selenicereus undatus HOM05D001988 ORTHO05D004985 2.0e-40 171.8 279 36.2
AagrBONN_evm.TU.Sc2ySwM_362.1335 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.7e-37 161.4 577 25.3
PSO513G0179 Papaver somniferum HOM05D001988 ORTHO05D004985 3.5e-37 161.0 515 27.8
Peaxi162Scf00342g00711 Petunia axillaris HOM05D001988 ORTHO05D004985 5.9e-37 160.2 482 28.8
Aqoxy5G02834 Aquilegia oxysepala HOM05D001988 ORTHO05D004985 3.5e-29 134.4 113 56.6
CARHR212720 Cardamine hirsuta HOM05D001988 ORTHO05D004985 8.9e-25 119.8 333 31.2
SMO239G0039 Selaginella moellendorffii HOM05D001988 ORTHO05D004985 1.3e-23 115.9 147 40.8
CARHR145380 Cardamine hirsuta HOM05D001988 ORTHO05D004985 1.1e-22 112.8 211 34.6
Cfa008983 Carpinus fangiana HOM05D001988 ORTHO05D004985 1.0e-20 106.3 154 42.9
AagrBONN_evm.TU.Sc2ySwM_117.2968 Anthoceros agrestis HOM05D001988 ORTHO05D004985 1.7e-20 105.5 193 31.1
QL03p063393 Quercus lobata HOM05D001988 ORTHO05D004985 4.7e-18 97.4 61 78.7
QL03p064050 Quercus lobata HOM05D001988 ORTHO05D004985 1.8e-17 95.5 61 80.3
arahy.Tifrunner.gnm1.ann1.ZE0ACQ Arachis hypogaea HOM05D000603 ORTHO05D008734 7.5e-16 90.1 72 56.9
AagrBONN_evm.TU.Sc2ySwM_369.75 Anthoceros agrestis HOM05D001988 ORTHO05D004985 2.2e-15 88.6 190 30.0
AT1G42615 Arabidopsis thaliana HOM05D001988 ORTHO05D004985 2.4e-14 85.1 144 38.2
Peaxi162Scf00342g00712 Petunia axillaris HOM05D001988 ORTHO05D004985 4.6e-13 80.9 174 33.3
CDE06G2098 Ceratophyllum demersum HOM05D001988 ORTHO05D004985 1.3e-12 79.3 345 26.1
EL10As5g23508 Beta vulgaris HOM05D001988 ORTHO05D004985 6.6e-12 77.0 82 48.8
Atru.chr11.1787 Acer truncatum HOM05D001988 ORTHO05D004985 2.1e-10 72.0 59 57.6
BcaC06g34029 Brassica carinata HOM05D001988 ORTHO05D004985 2.8e-10 71.6 76 48.7
CARHR289080 Cardamine hirsuta HOM05D001988 ORTHO05D004985 6.2e-10 70.5 65 60.0
Os05g0352700 Oryza sativa ssp. japonica HOM05D001988 ORTHO05D004985 1.1e-09 69.7 84 42.9
Sp2g13990 Schrenkiella parvula HOM05D001988 ORTHO05D004985 1.4e-09 69.3 239 28.5
AL7G47160 Arabidopsis lyrata HOM05D001988 ORTHO05D004985 4.0e-09 67.8 244 27.9
MCO03G550 Micromonas commoda HOM05D001988 ORTHO05D004985 1.4e-06 59.3 426 20.7
Nitab4.5_0004699g0020 Nicotiana tabacum HOM05D001988 ORTHO05D004985 3.2e-06 58.2 90 37.8
SEGI_17983 Sequoiadendron giganteum HOM05D001988 ORTHO05D004985 9.2e-06 56.6 72 34.7


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