Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 8.7e-211 736.9 414 100.0
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 2.7e-156 555.8 390 76.7
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 1.3e-153 547.0 411 74.5
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 3.7e-153 545.4 414 76.1
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.0e-150 537.3 390 73.6
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.3e-150 537.0 414 70.8
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.3e-150 537.0 414 70.8
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 1.7e-150 536.6 391 73.9
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 2.9e-150 535.8 390 73.6
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 5.5e-149 531.6 390 73.3
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.8e-147 526.6 390 72.8
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.7e-145 520.0 390 74.9
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 4.8e-145 518.5 389 74.6
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.8e-144 516.5 399 70.2
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.8e-144 516.5 392 71.9
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 4.1e-144 515.4 385 73.2
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.2e-143 513.8 412 70.1
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 1.2e-143 513.8 386 72.3
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 1.0e-142 510.8 403 70.2
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.0e-142 510.8 389 75.6
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.7e-142 510.0 409 68.7
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.9e-141 506.5 382 73.0
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.5e-141 506.1 412 69.4
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 4.7e-140 501.9 385 73.0
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 6.1e-140 501.5 389 72.8
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.4e-139 500.4 424 67.2
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 6.8e-139 498.0 385 72.2
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 8.8e-139 497.7 411 68.1
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 1.2e-138 497.3 412 67.0
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 1.5e-138 496.9 401 68.8
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 2.6e-138 496.1 397 72.3
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.8e-137 492.7 388 71.9
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 6.3e-137 491.5 390 69.0
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.8e-136 490.0 418 70.3
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 5.4e-136 488.4 417 68.8
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 7.0e-136 488.0 394 71.3
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 3.5e-135 485.7 403 67.5
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 5.0e-134 481.9 426 64.1
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.3e-133 479.2 390 69.0
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 4.3e-133 478.8 411 69.3
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 5.6e-133 478.4 380 68.4
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.1e-132 476.5 389 69.2
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 8.0e-132 474.6 418 65.6
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 6.8e-131 471.5 419 62.8
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 3.4e-130 469.2 430 61.9
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.7e-129 466.8 447 60.6
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 2.9e-129 466.1 428 61.9
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 3.7e-129 465.7 395 66.3
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 3.7e-129 465.7 404 70.5
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 6.4e-129 464.9 404 65.3
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 3.2e-128 462.6 409 62.3
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 3.2e-128 462.6 409 62.3
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 4.1e-128 462.2 416 61.5
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 5.4e-128 461.8 416 62.0
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 7.0e-128 461.5 400 65.8
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 1.2e-127 460.7 276 84.4
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 2.0e-127 459.9 389 63.8
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.7e-127 459.5 319 74.9
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 3.5e-127 459.1 393 64.1
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 5.9e-127 458.4 422 62.8
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.3e-126 457.2 404 61.9
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 1.3e-126 457.2 411 61.1
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.7e-126 456.8 291 88.0
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 6.6e-126 454.9 424 59.4
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 6.6e-126 454.9 424 59.4
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 8.6e-126 454.5 384 66.4
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.1e-125 454.1 389 66.3
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.5e-125 453.8 426 60.1
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.5e-125 453.8 416 64.4
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 4.3e-125 452.2 415 61.0
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 7.3e-125 451.4 408 63.2
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 7.3e-125 451.4 390 65.4
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.8e-124 449.5 431 60.3
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 2.8e-124 449.5 401 63.3
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.0e-123 447.6 369 69.4
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 3.4e-122 442.6 371 68.5
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.7e-121 440.3 392 62.2
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 4.1e-120 435.6 419 59.4
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 3.0e-118 429.5 434 58.8
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 8.6e-118 427.9 409 59.2
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.2e-116 424.1 294 73.8
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 2.8e-116 422.9 259 82.6
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 1.4e-115 420.6 381 62.7
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 4.0e-115 419.1 294 73.1
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 2.0e-114 416.8 312 73.4
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 3.2e-112 409.5 318 71.4
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 9.2e-112 407.9 278 74.5
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 2.1e-111 406.8 352 61.4
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 5.1e-110 402.1 387 62.0
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 2.5e-109 399.8 388 63.7
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 6.2e-108 395.2 290 71.4
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 4.0e-107 392.5 312 68.3
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 8.9e-107 391.3 409 55.0
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 1.9e-104 383.6 293 67.6
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.7e-97 360.5 248 76.2
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 5.4e-96 355.5 291 69.1
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 7.3e-93 345.1 411 48.7
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.3e-92 344.4 416 53.8
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 6.2e-92 342.0 221 77.4
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 6.2e-92 342.0 246 75.6
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.5e-90 335.9 335 59.4
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 5.8e-90 335.5 336 58.3
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 5.4e-88 328.9 299 60.2
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 7.1e-88 328.6 435 48.7
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 6.0e-87 325.5 198 82.8
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 2.3e-86 323.6 390 52.8
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.5e-82 310.8 263 66.2
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.0e-70 270.0 214 67.8
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 3.9e-70 269.6 158 83.5
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.9e-66 255.8 254 58.7
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.0e-65 255.0 304 54.3
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 2.5e-61 240.4 219 56.2
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 9.7e-61 238.4 280 48.6
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 5.3e-43 179.5 187 47.6
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 1.2e-39 168.3 306 34.3
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.1e-32 145.2 194 40.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 7.2e-32 142.5 180 53.3
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.0e-30 138.7 151 58.3
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 9.5e-24 115.5 78 78.2
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.8e-14 84.7 130 46.2
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 3.7e-12 77.0 101 48.5
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.6e-10 71.6 168 32.1
Atru.chr11.1544 Acer truncatum HOM05D006305 ORTHO05D007984 3.9e-09 67.0 83 56.6
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 1.1e-08 65.5 93 45.2


User provided reference genes

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