Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p101105 Quercus lobata HOM05D004647 ORTHO05D005349 5.9e-71 270.8 140 100.0
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 2.2e-57 225.7 123 95.9
QL02p101061 Quercus lobata HOM05D004647 ORTHO05D005349 5.4e-56 221.1 133 91.0
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 1.3e-54 216.5 122 91.8
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 3.3e-53 211.8 123 90.2
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 5.6e-53 211.1 121 90.1
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 8.1e-52 207.2 123 85.4
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 2.6e-50 202.2 118 87.3
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 3.4e-50 201.8 123 83.7
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 7.6e-50 200.7 120 85.0
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 9.9e-50 200.3 127 81.1
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 9.9e-50 200.3 120 86.7
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 2.2e-49 199.1 120 84.2
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 3.8e-49 198.4 123 82.1
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 4.9e-49 198.0 123 83.7
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 4.9e-49 198.0 120 83.3
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 6.4e-49 197.6 119 83.2
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 1.1e-48 196.8 120 82.5
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 1.1e-48 196.8 119 83.2
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 2.4e-48 195.7 120 81.7
VMungo1215G3307 Vigna mungo HOM05D004647 ORTHO05D005349 3.2e-48 195.3 121 81.8
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 4.1e-48 194.9 117 83.8
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 5.4e-48 194.5 120 82.5
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 7.1e-48 194.1 120 80.0
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 9.2e-48 193.7 120 81.7
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 9.2e-48 193.7 123 78.9
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 1.2e-47 193.4 117 83.8
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 1.2e-47 193.4 120 80.0
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 2.7e-47 192.2 119 79.8
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 2.7e-47 192.2 120 80.8
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 2.7e-47 192.2 120 80.8
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 2.7e-47 192.2 120 80.0
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 2.7e-47 192.2 119 80.7
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 3.5e-47 191.8 120 81.7
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 3.5e-47 191.8 120 79.2
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 3.5e-47 191.8 120 79.2
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 3.5e-47 191.8 120 80.8
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 4.6e-47 191.4 120 80.0
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 7.8e-47 190.7 120 79.2
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 1.0e-46 190.3 120 80.8
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 1.0e-46 190.3 120 80.0
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 1.0e-46 190.3 124 78.2
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 1.3e-46 189.9 120 79.2
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 1.3e-46 189.9 121 79.3
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 1.3e-46 189.9 120 79.2
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 1.7e-46 189.5 117 80.3
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 3.0e-46 188.7 119 79.0
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 3.9e-46 188.3 123 78.0
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 5.1e-46 188.0 120 77.5
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 5.1e-46 188.0 120 79.2
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.1e-46 188.0 116 81.0
THA.LOC104815465 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.1e-46 188.0 116 81.0
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.1e-46 188.0 116 81.0
Medtr5g009430 Medicago truncatula HOM05D004647 ORTHO05D005349 2.5e-45 185.7 124 74.2
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 2.5e-45 185.7 120 78.3
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 3.3e-45 185.3 118 79.7
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 4.3e-45 184.9 120 77.5
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 4.3e-45 184.9 120 77.5
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 5.6e-45 184.5 118 79.7
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 5.6e-45 184.5 119 77.3
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 7.3e-45 184.1 120 76.7
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 7.3e-45 184.1 119 76.5
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 7.3e-45 184.1 119 76.5
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 9.6e-45 183.7 120 77.5
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 9.6e-45 183.7 118 78.8
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 9.6e-45 183.7 118 78.8
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.6e-44 183.0 120 76.7
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 1.6e-44 183.0 119 78.2
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 2.1e-44 182.6 118 75.4
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 2.1e-44 182.6 119 79.0
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 2.1e-44 182.6 120 75.8
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 2.8e-44 182.2 119 77.3
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 2.8e-44 182.2 119 78.2
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 2.8e-44 182.2 119 78.2
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 2.8e-44 182.2 119 75.6
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 4.7e-44 181.4 119 76.5
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 4.7e-44 181.4 119 76.5
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 4.7e-44 181.4 121 75.2
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 6.2e-44 181.0 119 75.6
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 6.2e-44 181.0 120 75.8
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.1e-43 180.3 119 75.6
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 1.1e-43 180.3 119 75.6
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 1.1e-43 180.3 120 74.2
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.1e-43 180.3 119 76.5
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 1.4e-43 179.9 116 78.4
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 2.4e-43 179.1 119 76.5
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 3.1e-43 178.7 119 76.5
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 3.1e-43 178.7 119 76.5
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 3.1e-43 178.7 119 76.5
CSS0025503 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 3.1e-43 178.7 120 75.0
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 5.2e-43 177.9 120 74.2
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 5.2e-43 177.9 119 73.9
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 5.2e-43 177.9 119 75.6
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.9e-43 177.6 119 75.6
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 8.9e-43 177.2 120 74.2
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 2.6e-42 175.6 120 75.0
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 3.4e-42 175.3 119 74.8
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 3.4e-42 175.3 119 74.8
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 4.4e-42 174.9 135 68.9
SEGI_17588 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 4.4e-42 174.9 120 74.2
SEGI_39775 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 4.4e-42 174.9 120 74.2
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 4.4e-42 174.9 120 72.5
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 5.8e-42 174.5 116 77.6
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 5.8e-42 174.5 119 74.8
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 9.9e-42 173.7 116 77.6
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 4.9e-41 171.4 120 73.3
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 1.6e-39 166.4 120 72.5
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 2.7e-39 165.6 120 68.3
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 4.6e-39 164.9 120 68.3
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 7.8e-39 164.1 122 71.3
Ca_07701_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 1.7e-38 162.9 128 69.5
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 8.1e-36 154.1 125 68.8
Glyma.19G045000 Glycine max HOM05D004647 ORTHO05D005349 1.8e-35 152.9 124 66.9
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 8.4e-33 144.1 101 76.2
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 4.2e-32 141.7 88 80.7
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 2.1e-31 139.4 119 60.5
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 2.1e-31 139.4 92 75.0
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 6.0e-31 137.9 121 55.4
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 6.0e-31 137.9 118 57.6
CAN.G110.1 Capsicum annuum HOM05D004647 ORTHO05D005349 1.0e-30 137.1 117 62.4
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 1.0e-30 137.1 82 81.7
SEGI_00924 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 2.3e-30 136.0 100 71.0
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 3.6e-28 128.6 118 55.1
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 2.4e-27 125.9 93 67.7
Ca_22423_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 2.7e-23 112.5 108 63.0
PGSC0003DMG400042364 Solanum tuberosum HOM05D004647 ORTHO05D005349 6.0e-23 111.3 91 62.6
Cre07.g319900 Chlamydomonas reinhardtii HOM05D004647 ORTHO05D005349 2.3e-22 109.4 117 49.6
Zm00001eb359590 Zea mays HOM05D004647 ORTHO05D005349 3.0e-22 109.0 67 79.1
Potri.015G075400 Populus trichocarpa HOM05D004647 ORTHO05D005349 8.1e-20 100.9 71 71.8
Oeu005668.1 Olea europaea HOM05D004647 ORTHO05D005349 3.1e-19 99.0 68 70.6
CBR_g61059 Chara braunii HOM05D004647 ORTHO05D005349 1.5e-18 96.7 89 56.2
Dinv02900 Davidia involucrata HOM05D004647 ORTHO05D005349 2.9e-17 92.4 56 75.0
CSS0039197 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.1e-16 90.5 66 71.2
CsaV3_1G001530 Cucumis sativus L. HOM05D004647 ORTHO05D005349 1.4e-16 90.1 51 82.4
MD14G1181100 Malus domestica HOM05D004647 ORTHO05D005349 1.4e-16 90.1 166 42.2
THA.LOC104801749 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 3.5e-15 85.5 47 80.9
PRCOL_00002933 Prasinoderma coloniale HOM05D004647 ORTHO05D005349 1.8e-14 83.2 124 41.9
PSO384G3338 Papaver somniferum HOM05D004647 ORTHO05D005349 1.1e-13 80.5 48 79.2
Cfa024128 Carpinus fangiana HOM05D004647 ORTHO05D005349 1.4e-11 73.6 122 37.7
Actinidia19316 Actinidia chinensis HOM05D004647 ORTHO05D005349 1.3e-06 57.0 39 76.9


User provided reference genes

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