Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 1.2e-203 713.0 372 100.0
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 7.4e-169 597.4 373 81.0
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 2.8e-168 595.5 376 79.5
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 2.0e-158 562.8 373 75.9
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 1.1e-156 557.0 476 64.9
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 3.9e-154 548.5 373 75.3
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 2.4e-151 539.3 374 73.3
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 2.6e-150 535.8 326 82.2
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 7.7e-150 534.3 373 72.7
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 2.9e-149 532.3 377 72.4
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 3.8e-149 531.9 377 73.2
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 1.1e-148 530.4 373 75.6
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 1.9e-148 529.6 373 72.9
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 3.2e-148 528.9 377 73.2
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 6.1e-147 524.6 373 71.8
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 6.1e-147 524.6 374 70.3
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 2.0e-145 519.6 365 74.0
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 2.6e-145 519.2 373 72.4
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 2.6e-145 519.2 365 73.4
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 9.7e-145 517.3 376 70.2
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 2.2e-144 516.2 376 69.9
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 2.8e-144 515.8 373 68.6
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.8e-144 515.0 409 66.3
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 1.1e-143 513.8 372 69.9
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 1.1e-143 513.8 372 71.2
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 1.8e-143 513.1 374 69.0
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 2.4e-143 512.7 374 68.7
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 3.1e-143 512.3 374 70.1
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 2.0e-142 509.6 381 68.0
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 2.0e-142 509.6 378 69.6
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 4.5e-142 508.4 375 70.1
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 1.0e-141 507.3 365 72.9
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 1.0e-141 507.3 354 73.7
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 2.2e-141 506.1 367 71.1
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 2.9e-141 505.8 371 70.1
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 1.1e-140 503.8 375 74.4
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 9.4e-140 500.7 374 69.0
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 2.1e-139 499.6 327 75.2
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 2.1e-139 499.6 376 68.9
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 1.0e-138 497.3 315 78.4
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 3.9e-138 495.4 383 68.4
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 1.1e-137 493.8 364 69.5
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 1.1e-137 493.8 391 66.8
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 1.1e-137 493.8 389 66.1
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 3.3e-137 492.3 327 75.5
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 9.7e-137 490.7 374 67.4
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 2.8e-136 489.2 417 66.2
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 3.7e-136 488.8 365 70.4
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 1.1e-135 487.3 324 74.7
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 1.1e-135 487.3 348 71.8
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 5.3e-135 485.0 327 72.5
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 7.0e-135 484.6 373 66.5
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 9.1e-135 484.2 379 67.0
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 1.6e-134 483.4 380 69.7
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 2.0e-134 483.0 375 66.9
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 2.0e-134 483.0 373 71.6
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 5.9e-134 481.5 326 72.7
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 7.7e-134 481.1 375 66.9
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 8.5e-133 477.6 372 66.4
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 3.2e-132 475.7 377 67.1
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 7.2e-132 474.6 371 67.4
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 1.2e-131 473.8 376 67.0
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 1.6e-131 473.4 379 66.5
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 1.6e-131 473.4 367 67.6
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 3.0e-130 469.2 375 65.1
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 8.8e-130 467.6 373 66.5
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 2.0e-129 466.5 327 72.5
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 3.3e-129 465.7 367 71.1
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 7.5e-129 464.5 377 63.4
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 2.8e-128 462.6 327 71.9
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 6.3e-128 461.5 327 71.6
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 6.3e-128 461.5 323 72.4
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 6.3e-128 461.5 326 72.4
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 8.2e-128 461.1 325 72.9
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 7.0e-127 458.0 364 64.8
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 2.0e-126 456.4 327 70.9
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.3e-125 453.8 316 72.2
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 2.2e-125 453.0 316 71.8
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 2.9e-125 452.6 325 69.8
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 5.0e-125 451.8 325 72.3
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 6.5e-125 451.4 406 59.9
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 6.5e-125 451.4 328 69.8
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 1.5e-124 450.3 317 72.2
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 5.5e-124 448.4 328 69.5
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 2.7e-123 446.0 315 72.1
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 8.0e-123 444.5 361 65.9
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 1.0e-122 444.1 323 69.3
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 1.0e-122 444.1 323 69.3
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 3.0e-122 442.6 422 57.8
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 1.8e-119 433.3 330 67.3
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 1.0e-117 427.6 332 66.6
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 2.5e-116 422.9 332 64.2
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 2.1e-115 419.9 326 66.6
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 3.1e-111 406.0 324 68.2
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 5.7e-105 385.2 323 62.2
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 4.6e-102 375.6 322 59.0
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 4.0e-98 362.5 261 73.2
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 1.5e-97 360.5 373 54.7
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 3.2e-95 352.8 328 56.7
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 9.8e-89 331.3 306 58.8
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 1.3e-88 330.9 323 54.5
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 8.3e-88 328.2 275 63.6
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 1.9e-79 300.4 455 42.0
HPP92_013441 Vanilla planifolia HOM05D007027 ORTHO05D008765 3.0e-77 293.1 180 75.6
Aa31LG1G5150 Aethionema arabicum HOM05D007027 ORTHO05D008765 1.1e-74 284.6 221 66.1
CDE05G2927 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 3.6e-67 259.6 138 87.7
AUR62028254 Chenopodium quinoa HOM05D007027 ORTHO05D008765 2.0e-65 253.8 202 68.3
Lsat_1_v5_gn_9_120240 Lactuca sativa HOM05D007027 ORTHO05D008765 1.5e-60 237.7 170 71.8
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 3.4e-57 226.5 375 41.1
Peaxi162Scf00011g01224 Petunia axillaris HOM05D007027 ORTHO05D008765 5.3e-50 202.6 224 52.7
Migut.B00774 Erythranthe guttata HOM05D007027 ORTHO05D008765 8.7e-45 185.3 138 73.2
RcHm_v2.0_Chr3g0481081 Rosa chinensis HOM05D007027 ORTHO05D008765 1.8e-34 151.0 79 89.9
CDE05G0566 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 3.8e-32 143.3 140 57.1
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 1.8e-18 97.8 333 26.7
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 2.4e-18 97.4 207 32.9
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 2.9e-16 90.5 324 25.6
CSS0037344 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 1.9e-15 87.8 208 29.3
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 1.9e-15 87.8 205 30.2
SGA_v2.0_scaffold109G31012 Striga asiatica HOM05D006708 ORTHO05D008321 2.5e-15 87.4 196 32.1
AUR62002543 Chenopodium quinoa HOM05D006708 ORTHO05D008321 5.5e-15 86.3 208 30.3
COL.COLO4_34511 Corchorus olitorius HOM05D006708 ORTHO05D008321 5.5e-15 86.3 197 30.5
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 5.5e-15 86.3 195 31.3
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 7.2e-15 85.9 205 30.7
MSTRG.24854 Avicennia marina HOM05D006708 ORTHO05D008321 9.4e-15 85.5 200 31.0
CSS0031150 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 1.2e-14 85.1 208 28.8
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 1.2e-14 85.1 199 30.2
AUR62029962 Chenopodium quinoa HOM05D006708 ORTHO05D008321 2.1e-14 84.3 206 29.6
Cre09.g405150 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 2.1e-14 84.3 341 26.4
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 2.1e-14 84.3 204 29.9
TPR.G12542 Trifolium pratense HOM05D006708 ORTHO05D008321 2.1e-14 84.3 198 31.8
Medtr4g123970 Medicago truncatula HOM05D006708 ORTHO05D008321 2.7e-14 84.0 204 29.9
VMungo1215G1693 Vigna mungo HOM05D006708 ORTHO05D008321 3.6e-14 83.6 200 29.5
Duzib151G0010 Durio zibethinus HOM05D006708 ORTHO05D008321 6.1e-14 82.8 198 29.8
Phvul.003G122200 Phaseolus vulgaris HOM05D006708 ORTHO05D008321 6.1e-14 82.8 198 30.3
Gohir.A02G058800 Gossypium hirsutum HOM05D006708 ORTHO05D008321 8.0e-14 82.4 198 28.8
Gorai.005G073000 Gossypium raimondii HOM05D006708 ORTHO05D008321 8.0e-14 82.4 198 28.8
Hma1.2p1_0013F.1_g007850 Hydrangea macrophylla HOM05D006708 ORTHO05D008321 8.0e-14 82.4 198 30.3
Actinidia02537 Actinidia chinensis HOM05D006708 ORTHO05D008321 1.0e-13 82.0 198 29.8
Prupe.1G104700 Prunus persica HOM05D006708 ORTHO05D008321 1.0e-13 82.0 198 29.3
Hund22645 Selenicereus undatus HOM05D006708 ORTHO05D008321 1.0e-13 82.0 207 30.0
Lsat_1_v5_gn_1_39980 Lactuca sativa HOM05D006708 ORTHO05D008321 1.4e-13 81.6 337 25.8
Lalb_Chr18g0047341 Lupinus albus HOM05D006708 ORTHO05D008321 1.4e-13 81.6 204 30.4
Psat4g021160 Pisum sativum HOM05D006708 ORTHO05D008321 1.8e-13 81.3 206 27.7
Thecc.04G313500 Theobroma cacao HOM05D006708 ORTHO05D008321 1.8e-13 81.3 198 29.8
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 2.3e-13 80.9 327 26.3
Dinv29501 Davidia involucrata HOM05D006708 ORTHO05D008321 2.3e-13 80.9 184 31.0
Manes.03G212000 Manihot esculenta HOM05D006708 ORTHO05D008321 3.0e-13 80.5 203 28.6
Nn3g21927 Nelumbo nucifera HOM05D006708 ORTHO05D008321 4.0e-13 80.1 207 30.0
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 8.8e-13 79.0 324 25.6
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 8.8e-13 79.0 324 25.6
Haze_12609 Corylus avellana HOM05D006708 ORTHO05D008321 8.8e-13 79.0 198 29.3
Haze_12620 Corylus avellana HOM05D006708 ORTHO05D008321 8.8e-13 79.0 198 29.3
GSVIVG01017693001 Vitis vinifera HOM05D006708 ORTHO05D008321 8.8e-13 79.0 203 30.0
ATR0796G062 Amborella trichopoda HOM05D006708 ORTHO05D008321 1.5e-12 78.2 198 29.3
Glyma.17G041000 Glycine max HOM05D006708 ORTHO05D008321 1.5e-12 78.2 200 29.0
RcHm_v2.0_Chr4g0427681 Rosa chinensis HOM05D006708 ORTHO05D008321 1.5e-12 78.2 200 28.0
TAR365G0272 Trochodendron aralioides HOM05D006708 ORTHO05D008321 2.0e-12 77.8 196 30.1
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 2.6e-12 77.4 198 29.8
HPP92_001944 Vanilla planifolia HOM05D006708 ORTHO05D008321 3.3e-12 77.0 196 29.6
CANSAT64G0974 Cannabis sativa HOM05D006708 ORTHO05D008321 4.4e-12 76.6 198 28.8
Cpa.g.sc146.18 Carica papaya HOM05D006708 ORTHO05D008321 4.4e-12 76.6 198 29.3
Ciclev10005313m.g Citrus clementina HOM05D006708 ORTHO05D008321 4.4e-12 76.6 212 28.3
FAN12G1816 Fragaria x ananassa HOM05D006708 ORTHO05D008321 4.4e-12 76.6 176 29.0
Eucgr.B03960 Eucalyptus grandis HOM05D006708 ORTHO05D008321 5.7e-12 76.3 199 28.6
Migut.A01089 Erythranthe guttata HOM05D006708 ORTHO05D008321 7.5e-12 75.9 199 28.6
Glyma.13G119200 Glycine max HOM05D006708 ORTHO05D008321 7.5e-12 75.9 200 27.5
FvH4_4g21570 Fragaria vesca HOM05D006708 ORTHO05D008321 1.3e-11 75.1 176 29.0
FAN07G1828 Fragaria x ananassa HOM05D006708 ORTHO05D008321 1.3e-11 75.1 176 29.0
FAN17G2628 Fragaria x ananassa HOM05D006708 ORTHO05D008321 1.7e-11 74.7 176 29.0
QL06p014362 Quercus lobata HOM05D006708 ORTHO05D008321 1.7e-11 74.7 198 28.3
EL10Ac3g06239 Beta vulgaris HOM05D006708 ORTHO05D008321 2.2e-11 74.3 195 27.7
PSO761G0290 Papaver somniferum HOM05D006708 ORTHO05D008321 2.2e-11 74.3 208 29.8
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 2.8e-11 73.9 201 30.8
Potri.008G206200 Populus trichocarpa HOM05D006708 ORTHO05D008321 2.8e-11 73.9 195 28.7
PSO210G5816 Papaver somniferum HOM05D006708 ORTHO05D008321 3.7e-11 73.6 208 29.8
Sabra08G0153200 Salix brachista HOM05D006708 ORTHO05D008321 3.7e-11 73.6 195 27.7
Cre13.g591501 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 6.3e-11 72.8 338 25.7
Aqoxy2G02504 Aquilegia oxysepala HOM05D006708 ORTHO05D008321 1.1e-10 72.0 247 27.1
TWI53G0094 Tripterygium wilfordii HOM05D006708 ORTHO05D008321 1.8e-10 71.2 198 30.3
Zm00001eb245280 Zea mays HOM05D006708 ORTHO05D008321 5.3e-10 69.7 198 27.3
SEGI_30443 Sequoiadendron giganteum HOM05D007027 ORTHO05D008765 1.6e-09 68.2 51 66.7
MD16G1135500 Malus domestica HOM05D006708 ORTHO05D008321 7.7e-09 65.9 197 27.4
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 2.2e-08 64.3 174 30.5
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 2.5e-07 60.8 276 26.1


User provided reference genes

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