Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g284120 Pisum sativum HOM05D006496 ORTHO05D008390 1.3e-123 446.4 227 100.0
TPR.G34315 Trifolium pratense HOM05D006496 ORTHO05D008390 2.2e-67 259.6 236 62.3
Medtr2g096520 Medicago truncatula HOM05D006496 ORTHO05D008390 3.7e-62 242.3 205 65.4
TPR.G34303 Trifolium pratense HOM05D006496 ORTHO05D008390 4.8e-62 241.9 243 55.6
Ca_01342_v3 Cicer arietinum L. HOM05D006496 ORTHO05D008390 9.0e-61 237.7 207 61.4
Medtr2g096500 Medicago truncatula HOM05D006496 ORTHO05D008485 4.2e-50 202.2 190 60.5
Psat5g284080 Pisum sativum HOM05D006496 ORTHO05D008390 9.4e-50 201.1 203 55.7
Medtr4g008590 Medicago truncatula HOM05D006496 ORTHO05D008390 1.1e-47 194.1 268 45.9
Glyma.13G333300 Glycine max HOM05D006496 ORTHO05D008390 1.2e-44 184.1 237 46.0
Glyma.07G118700 Glycine max HOM05D006496 ORTHO05D008390 1.2e-33 147.5 237 44.3
Lj3g0009171 Lotus japonicus HOM05D006496 ORTHO05D008390 2.6e-31 139.8 232 39.7
arahy.Tifrunner.gnm1.ann1.7PT1R0 Arachis hypogaea HOM05D006496 ORTHO05D008390 2.8e-30 136.3 239 41.0
Lalb_Chr22g0349991 Lupinus albus HOM05D006496 ORTHO05D008390 6.3e-30 135.2 214 40.7
arahy.Tifrunner.gnm1.ann1.4RYS79 Arachis hypogaea HOM05D006496 ORTHO05D008390 1.4e-29 134.0 240 40.0
Phvul.004G007200 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 1.6e-25 120.6 208 39.9
VMungo0464G2068 Vigna mungo HOM05D006496 ORTHO05D008390 1.4e-24 117.5 235 36.6
Prupe.6G084300 Prunus persica HOM05D006496 ORTHO05D008390 6.8e-24 115.2 254 36.2
RcHm_v2.0_Chr5g0062921 Rosa chinensis HOM05D006496 ORTHO05D008390 9.8e-23 111.3 217 35.9
Phvul.004G006200 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 4.9e-22 109.0 208 36.1
FAN25G3002 Fragaria x ananassa HOM05D006496 ORTHO05D008390 4.1e-21 105.9 207 36.7
QL01p033240 Quercus lobata HOM05D006496 ORTHO05D008390 5.4e-21 105.5 218 33.0
FAN11G2800 Fragaria x ananassa HOM05D006496 ORTHO05D008390 7.0e-21 105.1 204 36.3
QL01p033291 Quercus lobata HOM05D006496 ORTHO05D008390 7.0e-21 105.1 285 32.3
FAN16G2573 Fragaria x ananassa HOM05D006496 ORTHO05D008390 2.0e-20 103.6 204 36.8
FvH4_3g35002 Fragaria vesca HOM05D006496 ORTHO05D008390 2.7e-20 103.2 204 35.8
FAN21G2388 Fragaria x ananassa HOM05D006496 ORTHO05D008390 2.7e-20 103.2 204 36.3
Manes.04G031000 Manihot esculenta HOM05D006496 ORTHO05D008390 2.7e-20 103.2 215 35.3
Phvul.L002943 Phaseolus vulgaris HOM05D006496 ORTHO05D008390 7.7e-20 101.7 242 36.0
RcHm_v2.0_Chr5g0062931 Rosa chinensis HOM05D006496 ORTHO05D008390 2.3e-19 100.1 237 36.7
Prupe.6G084200 Prunus persica HOM05D006496 ORTHO05D008390 2.9e-19 99.8 237 34.6
TWI75G0988 Tripterygium wilfordii HOM05D006496 ORTHO05D008390 5.0e-19 99.0 211 32.7
MD03G1099400 Malus domestica HOM05D006496 ORTHO05D008390 1.5e-18 97.4 257 33.1
MD03G1099500 Malus domestica HOM05D006496 ORTHO05D008390 4.3e-18 95.9 252 32.9
VMungo1080G1046 Vigna mungo HOM05D006496 ORTHO05D008390 4.3e-18 95.9 222 36.5
Ciclev10028859m.g Citrus clementina HOM05D006496 ORTHO05D008390 5.6e-18 95.5 266 29.7
Hund04996 Selenicereus undatus HOM05D006496 ORTHO05D008390 9.5e-18 94.7 254 32.7
Atru.chr3.3823 Acer truncatum HOM05D006496 ORTHO05D008390 2.1e-17 93.6 268 30.2
Glyma.15G040900 Glycine max HOM05D006496 ORTHO05D008390 3.6e-17 92.8 179 38.5
MD11G1113700 Malus domestica HOM05D006496 ORTHO05D008390 1.4e-16 90.9 263 32.3
GSVIVG01025031001 Vitis vinifera HOM05D006496 ORTHO05D008390 1.4e-16 90.9 219 30.1
CiPaw.13G099300 Carya illinoinensis HOM05D006496 ORTHO05D008390 3.0e-16 89.7 233 30.0
Ah.08g218920 Amaranthus hybridus HOM05D006496 ORTHO05D008390 1.2e-15 87.8 253 31.2
Rhsim13G0086700 Rhododendron simsii HOM05D006496 ORTHO05D008390 2.6e-15 86.7 203 31.0
SalBow3G1961 Salvia bowleyana HOM05D006496 ORTHO05D008390 2.6e-15 86.7 221 28.1
CAN.G420.5 Capsicum annuum HOM05D006496 ORTHO05D008390 4.4e-15 85.9 207 30.0
Potri.009G027600 Populus trichocarpa HOM05D006496 ORTHO05D008390 4.4e-15 85.9 217 32.7
EL10Ac7g15965 Beta vulgaris HOM05D006496 ORTHO05D008390 1.3e-14 84.3 221 31.7
FvH4_3g35010 Fragaria vesca HOM05D006496 ORTHO05D008390 1.7e-14 84.0 204 32.8
FAN11G0827 Fragaria x ananassa HOM05D006496 ORTHO05D008390 2.2e-14 83.6 204 32.8
AUR62001835 Chenopodium quinoa HOM05D006496 ORTHO05D008390 8.3e-14 81.6 264 29.2
Lj2A1055T49 Lonicera japonica HOM05D006496 ORTHO05D008390 8.3e-14 81.6 203 32.5
Oeu058535.1 Olea europaea HOM05D006496 ORTHO05D008390 1.1e-13 81.3 209 30.6
CSS0000664 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 1.8e-13 80.5 210 30.0
AUR62009623 Chenopodium quinoa HOM05D006496 ORTHO05D008390 7.0e-13 78.6 261 29.1
Sabra09G0018800 Salix brachista HOM05D006496 ORTHO05D008390 9.2e-13 78.2 201 32.3
QL01p033212 Quercus lobata HOM05D006496 ORTHO05D008390 1.6e-12 77.4 107 47.7
FAN25G1110 Fragaria x ananassa HOM05D006496 ORTHO05D008390 3.5e-12 76.3 225 31.6
ECA247G0375 Erigeron canadensis HOM05D006496 ORTHO05D008390 4.6e-12 75.9 202 31.7
PGSC0003DMG400015535 Solanum tuberosum HOM05D006496 ORTHO05D008390 4.6e-12 75.9 202 27.2
Cpa.g.sc190.31 Carica papaya HOM05D006496 ORTHO05D008390 5.9e-12 75.5 235 29.8
Medtr2g037430 Medicago truncatula HOM05D006496 ORTHO05D008390 5.9e-12 75.5 54 66.7
DCAR_015607 Daucus carota HOM05D006496 ORTHO05D008390 1.0e-11 74.7 204 33.3
Migut.D02127 Erythranthe guttata HOM05D006496 ORTHO05D008390 1.0e-11 74.7 207 28.0
HanXRQChr04g0106921 Helianthus annuus HOM05D006496 ORTHO05D008390 1.3e-11 74.3 210 29.5
Lj3g0006193 Lotus japonicus HOM05D006496 ORTHO05D008390 2.3e-11 73.6 83 48.2
vmacro03111 Vaccinium macrocarpon HOM05D006496 ORTHO05D008390 5.0e-11 72.4 241 26.1
Sc06g0008220 Simmondsia chinensis HOM05D006496 ORTHO05D008390 1.1e-10 71.2 88 47.7
FAN16G0777 Fragaria x ananassa HOM05D006496 ORTHO05D008390 4.3e-10 69.3 206 31.6
CSS0042381 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 5.6e-10 68.9 238 29.4
THA.LOC104810806 Tarenaya hassleriana HOM05D006496 ORTHO05D008390 5.6e-10 68.9 213 27.2
Prupe.6G084500 Prunus persica HOM05D006496 ORTHO05D008390 9.5e-10 68.2 59 57.6
Nitab4.5_0003498g0030 Nicotiana tabacum HOM05D006496 ORTHO05D008390 1.2e-09 67.8 188 30.9
FAN21G0875 Fragaria x ananassa HOM05D006496 ORTHO05D008390 1.6e-09 67.4 229 28.8
BolC3t13791H Brassica oleracea HOM05D006496 ORTHO05D008390 2.1e-09 67.0 213 30.5
Lsat_1_v5_gn_5_167360 Lactuca sativa HOM05D006496 ORTHO05D008390 2.8e-09 66.6 320 26.6
CARHR273380 Cardamine hirsuta HOM05D006496 ORTHO05D008390 3.6e-09 66.2 219 28.8
HanXRQChr01g0009851 Helianthus annuus HOM05D006496 ORTHO05D008390 4.7e-09 65.9 209 26.8
C03p13280 Brassica napus HOM05D006496 ORTHO05D008390 6.2e-09 65.5 213 30.0
Carub.0008s2046 Capsella rubella HOM05D006496 ORTHO05D008390 6.2e-09 65.5 225 29.3
BcaC01g06549 Brassica carinata HOM05D006496 ORTHO05D008390 8.0e-09 65.1 213 30.0
Sopen11g030740 Solanum pennellii HOM05D006496 ORTHO05D008390 8.0e-09 65.1 251 27.5
Peaxi162Scf00411g00117 Petunia axillaris HOM05D006496 ORTHO05D008390 1.4e-08 64.3 55 54.5
COL.COLO4_18451 Corchorus olitorius HOM05D006496 ORTHO05D008390 1.8e-08 63.9 70 48.6
DCAR_018892 Daucus carota HOM05D006496 ORTHO05D008390 3.1e-08 63.2 177 29.9
SGA_v2.0_scaffold61G21263 Striga asiatica HOM05D006496 ORTHO05D008390 4.0e-08 62.8 201 27.9
Duzib093G1405 Durio zibethinus HOM05D006496 ORTHO05D004692 6.8e-08 62.0 198 27.8
Thhalv10014093m.g Eutrema salsugineum HOM05D006496 ORTHO05D008390 8.9e-08 61.6 223 26.0
Hma1.2p1_0035F.1_g022050 Hydrangea macrophylla HOM05D006496 ORTHO05D008390 1.2e-07 61.2 66 53.0
Sp6g21470 Schrenkiella parvula HOM05D006496 ORTHO05D008390 1.2e-07 61.2 53 56.6
BcaB08g36218 Brassica carinata HOM05D006496 ORTHO05D008390 1.5e-07 60.8 53 60.4
BolC9t58098H Brassica oleracea HOM05D006496 ORTHO05D008390 2.0e-07 60.5 76 46.1
ECA248G1113 Erigeron canadensis HOM05D006496 ORTHO05D008390 2.0e-07 60.5 213 26.3
Lsat_1_v5_gn_9_22140 Lactuca sativa HOM05D006496 ORTHO05D008390 2.0e-07 60.5 213 26.8
Nitab4.5_0009215g0030 Nicotiana tabacum HOM05D006496 ORTHO05D008390 2.0e-07 60.5 188 29.3
Actinidia07064 Actinidia chinensis HOM05D006496 ORTHO05D008390 2.6e-07 60.1 67 49.3
Actinidia37238 Actinidia chinensis HOM05D006496 ORTHO05D008390 2.6e-07 60.1 96 42.7
Aa31sc23G160 Aethionema arabicum HOM05D006496 ORTHO05D008390 2.6e-07 60.1 60 58.3
AL8G36350 Arabidopsis lyrata HOM05D006496 ORTHO05D008390 3.4e-07 59.7 79 44.3
A03p11480 Brassica napus HOM05D006496 ORTHO05D008390 3.4e-07 59.7 54 51.9
BraA03t10462Z Brassica rapa HOM05D006496 ORTHO05D008390 3.4e-07 59.7 54 51.9
BcaC04g19631 Brassica carinata HOM05D006496 ORTHO05D008390 4.4e-07 59.3 70 47.1
A10p17060 Brassica napus HOM05D006496 ORTHO05D008390 4.4e-07 59.3 70 44.3
C09p52290 Brassica napus HOM05D006496 ORTHO05D008390 5.8e-07 58.9 70 45.7
Duzib168G2252 Durio zibethinus HOM05D006496 ORTHO05D008390 5.8e-07 58.9 74 40.5
AT5G59800 Arabidopsis thaliana HOM05D006496 ORTHO05D008390 1.3e-06 57.8 201 25.9
Medtr2g096510 Medicago truncatula HOM05D006496 ORTHO05D008390 1.7e-06 57.4 42 64.3
BraA10t43786Z Brassica rapa HOM05D006496 ORTHO05D008390 2.2e-06 57.0 74 41.9
Dinv06145 Davidia involucrata HOM05D006496 ORTHO05D008390 2.9e-06 56.6 78 41.0
CSS0005064 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 8.3e-06 55.1 175 26.3
Cc01_g12300 Coffea canephora HOM05D006496 ORTHO05D008390 8.3e-06 55.1 74 40.5


User provided reference genes

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