Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g199040 Pisum sativum HOM05D003635 ORTHO05D004283 5.0e-190 667.5 321 100.0
Medtr1g115525 Medicago truncatula HOM05D003635 ORTHO05D004283 1.1e-152 543.5 464 63.1
Glyma.20G240500 Glycine max HOM05D003635 ORTHO05D004283 7.8e-151 537.3 464 61.9
VMungo0720G0614 Vigna mungo HOM05D003635 ORTHO05D004283 7.8e-151 537.3 464 61.9
Phvul.007G009600 Phaseolus vulgaris HOM05D003635 ORTHO05D004283 1.0e-150 537.0 464 61.9
Ca_11305_v3 Cicer arietinum L. HOM05D003635 ORTHO05D004283 6.6e-150 534.3 464 61.6
Glyma.10G291300 Glycine max HOM05D003635 ORTHO05D004283 8.6e-150 533.9 464 61.2
Lalb_Chr06g0164191 Lupinus albus HOM05D003635 ORTHO05D004283 1.1e-149 533.5 463 61.6
Lj5g0001158 Lotus japonicus HOM05D003635 ORTHO05D004283 2.5e-149 532.3 464 61.4
Lalb_Chr02g0143971 Lupinus albus HOM05D003635 ORTHO05D004283 2.5e-149 532.3 463 61.6
Cpa.g.sc1.324 Carica papaya HOM05D003635 ORTHO05D004283 2.8e-148 528.9 463 61.1
arahy.Tifrunner.gnm1.ann1.4JT818 Arachis hypogaea HOM05D003635 ORTHO05D004283 6.2e-148 527.7 459 61.2
QL08p057820 Quercus lobata HOM05D003635 ORTHO05D004283 1.2e-146 523.5 462 60.6
ClCG02G013500 Citrullus lanatus HOM05D003635 ORTHO05D004283 1.5e-146 523.1 459 60.8
Prupe.2G226500 Prunus persica HOM05D003635 ORTHO05D004283 2.0e-146 522.7 457 60.4
CsaV3_5G006650 Cucumis sativus L. HOM05D003635 ORTHO05D004283 2.6e-146 522.3 464 60.1
TPR.G13999 Trifolium pratense HOM05D003635 ORTHO05D004283 3.4e-146 521.9 454 61.7
MELO3C023823.2 Cucumis melo HOM05D003635 ORTHO05D004283 4.4e-146 521.5 464 60.1
COL.COLO4_10911 Corchorus olitorius HOM05D003635 ORTHO05D004283 1.7e-145 519.6 458 60.5
RcHm_v2.0_Chr3g0492631 Rosa chinensis HOM05D003635 ORTHO05D004283 1.7e-145 519.6 456 60.5
Haze_16985 Corylus avellana HOM05D003635 ORTHO05D004283 2.2e-145 519.2 461 60.5
FvH4_1g28630 Fragaria vesca HOM05D003635 ORTHO05D004283 2.2e-145 519.2 456 60.3
FAN19G1456 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.2e-145 519.2 456 60.3
Medtr4g115500 Medicago truncatula HOM05D003635 ORTHO05D004283 2.2e-145 519.2 464 59.9
CANSAT56G1536 Cannabis sativa HOM05D003635 ORTHO05D004283 2.9e-145 518.8 458 60.3
FAN23G1337 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.9e-145 518.8 454 60.4
FAN23G3063 Fragaria x ananassa HOM05D003635 ORTHO05D004283 2.9e-145 518.8 454 60.4
Gohir.D10G219000 Gossypium hirsutum HOM05D003635 ORTHO05D004283 2.9e-145 518.8 459 60.3
Gorai.011G245700 Gossypium raimondii HOM05D003635 ORTHO05D004283 2.9e-145 518.8 459 60.3
MD01G1119800 Malus domestica HOM05D003635 ORTHO05D004283 2.9e-145 518.8 457 59.7
Duzib128G1000 Durio zibethinus HOM05D003635 ORTHO05D004283 3.8e-145 518.5 464 59.9
Gohir.A10G210700 Gossypium hirsutum HOM05D003635 ORTHO05D004283 4.9e-145 518.1 464 59.7
TAR369G0684 Trochodendron aralioides HOM05D003635 ORTHO05D004283 4.9e-145 518.1 459 60.3
Cfa001548 Carpinus fangiana HOM05D003635 ORTHO05D004283 6.4e-145 517.7 461 60.3
FAN26G2866 Fragaria x ananassa HOM05D003635 ORTHO05D004283 6.4e-145 517.7 455 60.0
FAN28G1205 Fragaria x ananassa HOM05D003635 ORTHO05D004283 8.4e-145 517.3 456 60.1
GSVIVG01005970001 Vitis vinifera HOM05D003635 ORTHO05D004283 8.4e-145 517.3 400 66.8
CiPaw.02G179700 Carya illinoinensis HOM05D003635 ORTHO05D004283 1.9e-144 516.2 463 60.0
Dinv25952 Davidia involucrata HOM05D003635 ORTHO05D004283 1.9e-144 516.2 462 59.1
CiPaw.01G281100 Carya illinoinensis HOM05D003635 ORTHO05D004283 2.4e-144 515.8 463 60.0
Sed0026990 Sechium edule HOM05D003635 ORTHO05D004283 2.4e-144 515.8 463 59.4
Manes.07G109100 Manihot esculenta HOM05D003635 ORTHO05D004283 3.2e-144 515.4 463 59.2
Thecc.10G059000 Theobroma cacao HOM05D003635 ORTHO05D004283 3.2e-144 515.4 464 59.7
Gorai.012G068000 Gossypium raimondii HOM05D003635 ORTHO05D004283 4.2e-144 515.0 459 59.9
Medtr4g115810 Medicago truncatula HOM05D003635 ORTHO05D004283 4.2e-144 515.0 459 59.7
CARHR289060 Cardamine hirsuta HOM05D003635 ORTHO05D004283 5.4e-144 514.6 453 59.6
CSS0019699 Camellia sinensis var. sinensis HOM05D003635 ORTHO05D004283 1.6e-143 513.1 462 58.9
AT3G55200 Arabidopsis thaliana HOM05D003635 ORTHO05D004283 2.1e-143 512.7 459 59.0
AT3G55220 Arabidopsis thaliana HOM05D003635 ORTHO05D004283 2.1e-143 512.7 459 59.0
Thhalv10006588m.g Eutrema salsugineum HOM05D003635 ORTHO05D004283 2.1e-143 512.7 459 58.6
Nn2g10520 Nelumbo nucifera HOM05D003635 ORTHO05D004283 2.7e-143 512.3 459 58.6
Duzib114G0516 Durio zibethinus HOM05D003635 ORTHO05D004283 4.6e-143 511.5 464 59.1
THA.LOC104824257 Tarenaya hassleriana HOM05D003635 ORTHO05D004283 4.6e-143 511.5 459 58.8
AL5G36324 Arabidopsis lyrata HOM05D003635 ORTHO05D004283 6.0e-143 511.1 459 58.8
Gohir.A05G351700 Gossypium hirsutum HOM05D003635 ORTHO05D004283 6.0e-143 511.1 459 59.5
Aa31LG10G9870 Aethionema arabicum HOM05D003635 ORTHO05D004283 7.8e-143 510.8 459 58.6
Manes.10G036500 Manihot esculenta HOM05D003635 ORTHO05D004283 7.8e-143 510.8 459 59.3
Potri.008G048900 Populus trichocarpa HOM05D003635 ORTHO05D004283 1.0e-142 510.4 463 59.0
Sp5g07240 Schrenkiella parvula HOM05D003635 ORTHO05D004283 1.3e-142 510.0 459 58.8
Lj8A91T61 Lonicera japonica HOM05D003635 ORTHO05D004283 2.3e-142 509.2 461 58.6
Nn2g12856 Nelumbo nucifera HOM05D003635 ORTHO05D004283 3.0e-142 508.8 460 58.3
Oeu016870.1 Olea europaea HOM05D003635 ORTHO05D004283 3.9e-142 508.4 455 59.1
Rhsim09G0157900 Rhododendron simsii HOM05D003635 ORTHO05D004283 3.9e-142 508.4 462 58.9
DCAR_015231 Daucus carota HOM05D003635 ORTHO05D004283 5.1e-142 508.1 456 59.4
HPP92_016710 Vanilla planifolia HOM05D003635 ORTHO05D004283 6.6e-142 507.7 461 58.8
BcaB02g07694 Brassica carinata HOM05D003635 ORTHO05D004283 8.7e-142 507.3 459 58.4
BraA01t04192Z Brassica rapa HOM05D003635 ORTHO05D004283 1.5e-141 506.5 459 58.4
PGR142G3382 Punica granatum HOM05D003635 ORTHO05D004283 1.5e-141 506.5 462 58.4
HPP92_027161 Vanilla planifolia HOM05D003635 ORTHO05D004283 1.5e-141 506.5 461 58.6
BcaC09g48162 Brassica carinata HOM05D003635 ORTHO05D004283 2.5e-141 505.8 459 58.2
BolC1t05325H Brassica oleracea HOM05D003635 ORTHO05D004283 2.5e-141 505.8 459 58.2
HanXRQChr14g0437201 Helianthus annuus HOM05D003635 ORTHO05D004283 4.3e-141 505.0 461 57.9
Aqoxy1G01641 Aquilegia oxysepala HOM05D003635 ORTHO05D004283 5.6e-141 504.6 458 57.6
Aqoxy2G04103 Aquilegia oxysepala HOM05D003635 ORTHO05D004283 5.6e-141 504.6 458 57.6
MSTRG.22089 Avicennia marina HOM05D003635 ORTHO05D004283 5.6e-141 504.6 456 59.2
Lsat_1_v5_gn_8_18261 Lactuca sativa HOM05D003635 ORTHO05D004283 5.6e-141 504.6 461 57.9
THA.LOC104810010 Tarenaya hassleriana HOM05D003635 ORTHO05D004283 5.6e-141 504.6 459 57.7
Atru.chr12.571 Acer truncatum HOM05D003635 ORTHO05D004283 7.3e-141 504.2 458 58.3
DCAR_019162 Daucus carota HOM05D003635 ORTHO05D004283 1.2e-140 503.4 456 58.8
Eucgr.J01165 Eucalyptus grandis HOM05D003635 ORTHO05D004283 1.2e-140 503.4 463 57.9
SGA_v2.0_scaffold364G49990 Striga asiatica HOM05D003635 ORTHO05D004283 1.6e-140 503.1 456 58.1
ATR0820G062 Amborella trichopoda HOM05D003635 ORTHO05D004283 2.1e-140 502.7 459 58.4
Potri.010G212100 Populus trichocarpa HOM05D003635 ORTHO05D004283 2.1e-140 502.7 463 57.7
ECA233G0861 Erigeron canadensis HOM05D003635 ORTHO05D004283 2.8e-140 502.3 461 57.7
PSO384G4083 Papaver somniferum HOM05D003635 ORTHO05D004283 4.7e-140 501.5 468 57.5
AUR62035965 Chenopodium quinoa HOM05D003635 ORTHO05D004283 6.2e-140 501.1 427 61.4
SalBow7G2745 Salvia bowleyana HOM05D003635 ORTHO05D004283 6.2e-140 501.1 456 57.9
HanXRQChr08g0228691 Helianthus annuus HOM05D003635 ORTHO05D004283 1.1e-139 500.4 461 57.5
SGA_v2.0_scaffold54G19634 Striga asiatica HOM05D003635 ORTHO05D004283 1.4e-139 500.0 456 57.9
Actinidia02986 Actinidia chinensis HOM05D003635 ORTHO05D004283 2.4e-139 499.2 402 64.9
Ciclev10030532m.g Citrus clementina HOM05D003635 ORTHO05D004283 3.1e-139 498.8 458 57.4
Migut.N02978 Erythranthe guttata HOM05D003635 ORTHO05D004283 3.1e-139 498.8 456 57.9
PSO339G2718 Papaver somniferum HOM05D003635 ORTHO05D004283 5.3e-139 498.0 468 57.3
Sc06g0001910 Simmondsia chinensis HOM05D003635 ORTHO05D004283 9.0e-139 497.3 457 57.8
Peaxi162Scf00060g00511 Petunia axillaris HOM05D003635 ORTHO05D004283 1.5e-138 496.5 456 57.5
TWI63G0503 Tripterygium wilfordii HOM05D003635 ORTHO05D004283 1.5e-138 496.5 464 57.1
AL5G36340 Arabidopsis lyrata HOM05D003635 ORTHO05D004283 2.0e-138 496.1 296 79.7
EL10Ac2g03470 Beta vulgaris HOM05D003635 ORTHO05D004283 2.6e-138 495.7 453 58.3
arahy.Tifrunner.gnm1.ann1.T81D7J Arachis hypogaea HOM05D003635 ORTHO05D004283 3.4e-138 495.4 506 54.7
Hund19994 Selenicereus undatus HOM05D003635 ORTHO05D004283 5.8e-138 494.6 453 58.1
Carub.0005s2188 Capsella rubella HOM05D003635 ORTHO05D004283 7.6e-138 494.2 457 57.8
AUR62022537 Chenopodium quinoa HOM05D003635 ORTHO05D004283 7.6e-138 494.2 453 58.1
unitig_736.g22269 Utricularia gibba HOM05D003635 ORTHO05D004283 1.3e-137 493.4 456 57.5
Zm00001eb231820 Zea mays HOM05D003635 ORTHO05D004283 2.2e-137 492.7 463 56.4
Os02g0137400 Oryza sativa ssp. japonica HOM05D003635 ORTHO05D004283 3.8e-137 491.9 464 56.7
Nitab4.5_0000426g0110 Nicotiana tabacum HOM05D003635 ORTHO05D004283 8.4e-137 490.7 456 56.8
Nitab4.5_0012497g0010 Nicotiana tabacum HOM05D003635 ORTHO05D004283 3.2e-136 488.8 456 56.4
CAN.G1557.8 Capsicum annuum HOM05D003635 ORTHO05D004283 7.1e-136 487.6 456 56.4
PGSC0003DMG400030187 Solanum tuberosum HOM05D003635 ORTHO05D004283 1.2e-135 486.9 456 56.6
Ah.09g234270 Amaranthus hybridus HOM05D003635 ORTHO05D004283 2.7e-135 485.7 453 57.2
Medtr6g013290 Medicago truncatula HOM05D003635 ORTHO05D004283 3.5e-135 485.3 436 61.5
Sopen04g005450 Solanum pennellii HOM05D003635 ORTHO05D004283 3.5e-135 485.3 456 56.4
SEGI_11055 Sequoiadendron giganteum HOM05D003635 ORTHO05D004283 6.6e-134 481.1 457 55.4
FAN03G1481 Fragaria x ananassa HOM05D003635 ORTHO05D004283 8.7e-134 480.7 296 77.0
FvH4_7g20980 Fragaria vesca HOM05D003635 ORTHO05D004283 1.1e-131 473.8 296 75.7
FAN06G2419 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.1e-131 473.8 296 75.7
FAN10G2700 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.1e-131 473.8 296 75.7
FAN06G4735 Fragaria x ananassa HOM05D003635 ORTHO05D004283 4.0e-131 471.9 296 75.3
Mapoly0009s0019 Marchantia polymorpha HOM05D003635 ORTHO05D004283 1.9e-128 463.0 458 53.3
SMO116G0157 Selaginella moellendorffii HOM05D003635 ORTHO05D004283 2.1e-127 459.5 451 53.9
Pp3c16_16800 Physcomitrium patens HOM05D003635 ORTHO05D004283 2.7e-127 459.1 458 52.8
AagrBONN_evm.TU.Sc2ySwM_368.1182 Anthoceros agrestis HOM05D003635 ORTHO05D004283 4.6e-127 458.4 453 53.9
Pp3c12_11240 Physcomitrium patens HOM05D003635 ORTHO05D004283 1.1e-125 453.8 458 52.4
Pp3c4_5190 Physcomitrium patens HOM05D003635 ORTHO05D004283 5.6e-125 451.4 458 52.4
CDE09G0269 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 1.5e-122 443.4 430 56.3
CBR_g32401 Chara braunii HOM05D003635 ORTHO05D004283 1.0e-118 430.6 296 67.9
AagrBONN_evm.TU.Sc2ySwM_362.982 Anthoceros agrestis HOM05D003635 ORTHO05D004283 1.3e-113 413.7 417 54.2
Solyc04g010260.3 Solanum lycopersicum HOM05D003635 ORTHO05D004283 1.3e-113 413.7 420 53.1
AUR62023868 Chenopodium quinoa HOM05D003635 ORTHO05D004283 1.3e-110 403.7 453 48.6
Hma1.2p1_3477F.1_g336300 Hydrangea macrophylla HOM05D003635 ORTHO05D004283 4.5e-106 388.7 395 54.7
Rhsim09G0158100 Rhododendron simsii HOM05D003635 ORTHO05D004283 1.1e-99 367.5 432 50.0
AUR62044277 Chenopodium quinoa HOM05D003635 ORTHO05D004283 8.5e-97 357.8 230 74.8
Actinidia29205 Actinidia chinensis HOM05D003635 ORTHO05D004283 1.1e-93 347.4 399 51.6
Gohir.D04G061100 Gossypium hirsutum HOM05D003635 ORTHO05D004283 9.7e-93 344.4 223 76.7
Psat6g237600 Pisum sativum HOM05D003635 ORTHO05D004283 1.7e-92 343.6 321 59.8
Actinidia13851 Actinidia chinensis HOM05D003635 ORTHO05D004283 3.1e-91 339.3 302 61.6
Dinv31402 Davidia involucrata HOM05D003635 ORTHO05D004283 1.0e-89 334.3 335 56.4
MCO14G333 Micromonas commoda HOM05D003635 ORTHO05D004283 2.0e-85 320.1 296 52.4
Cre08.g372800 Chlamydomonas reinhardtii HOM05D003635 ORTHO05D004283 6.3e-84 315.1 344 47.7
PRCOL_00000086 Prasinoderma coloniale HOM05D003635 ORTHO05D004283 5.3e-83 312.0 296 52.4
Psat7g159960 Pisum sativum HOM05D003635 ORTHO05D004283 1.2e-82 310.8 218 72.5
AUR62002616 Chenopodium quinoa HOM05D003635 ORTHO05D004283 1.2e-66 257.7 182 66.5
Psat7g159880 Pisum sativum HOM05D003635 ORTHO05D004283 2.8e-63 246.5 168 72.6
Carub.0005s2186 Capsella rubella HOM05D003635 ORTHO05D004283 1.0e-62 244.6 164 72.6
Haze_26580 Corylus avellana HOM05D003635 ORTHO05D004283 3.4e-61 239.6 406 34.2
Cc00_g13950 Coffea canephora HOM05D003635 ORTHO05D004283 2.2e-60 236.9 164 69.5
CDE02G0853 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 2.8e-60 236.5 163 70.6
Cc00_g29200 Coffea canephora HOM05D003635 ORTHO05D004283 4.4e-45 186.0 257 45.1
FAN01G1516 Fragaria x ananassa HOM05D003635 ORTHO05D004283 4.6e-42 176.0 96 81.2
FAN10G0554 Fragaria x ananassa HOM05D003635 ORTHO05D002227 4.6e-42 176.0 96 81.2
MD07G1188800 Malus domestica HOM05D003635 ORTHO05D004283 4.7e-39 166.0 85 89.4
Psat1g081240 Pisum sativum HOM05D000684 ORTHO05D006827 3.4e-37 159.8 115 70.4
HanXRQChr08g0234771 Helianthus annuus HOM05D003635 ORTHO05D004283 2.7e-34 150.2 71 88.7
ECA233G4736 Erigeron canadensis HOM05D003635 ORTHO05D004283 6.0e-34 149.1 135 54.8
VMungo1215G3139 Vigna mungo HOM05D003635 ORTHO05D004283 2.1e-23 114.0 56 91.1
CAN.G98.10 Capsicum annuum HOM05D003635 ORTHO05D004283 5.4e-19 99.4 64 65.6
EL10Ac3g06633 Beta vulgaris HOM05D003635 ORTHO05D004283 3.0e-17 93.6 45 86.7
CARHR289050 Cardamine hirsuta HOM05D003635 ORTHO05D021615 8.7e-17 92.0 47 89.4
CDE02G2560 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 1.3e-12 78.2 49 81.6
MD07G1189000 Malus domestica HOM05D003635 ORTHO05D004283 2.9e-12 77.0 45 80.0
HanXRQChr08g0234761 Helianthus annuus HOM05D003635 ORTHO05D004283 4.9e-12 76.3 45 84.4
QL07p044690 Quercus lobata HOM05D003609 ORTHO05D004185 1.4e-11 74.7 272 25.4
Atru.chr10.947 Acer truncatum HOM05D003609 ORTHO05D004185 1.2e-10 71.6 270 26.7
AUR62002316 Chenopodium quinoa HOM05D003635 ORTHO05D004283 2.1e-10 70.9 139 35.3
AUR62039159 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.6e-10 69.7 74 51.4
FAN10G2922 Fragaria x ananassa HOM05D003635 ORTHO05D004283 8.7e-09 65.5 44 72.7
Zm00001eb128630 Zea mays HOM05D003635 ORTHO05D004283 5.6e-08 62.8 31 87.1
Zm00001eb014440 Zea mays HOM05D002023 ORTHO05D010966 7.4e-08 62.4 57 50.9
Zm00001eb335840 Zea mays HOM05D002023 ORTHO05D010966 2.8e-07 60.5 32 78.1
Zm00001eb101730 Zea mays HOM05D003635 ORTHO05D004283 6.2e-07 59.3 38 71.1
Zm00001eb421210 Zea mays HOM05D002023 ORTHO05D002049 6.2e-07 59.3 37 67.6
Lsat_1_v5_gn_8_8061 Lactuca sativa HOM05D004403 ORTHO05D006164 1.8e-06 57.8 269 21.2
ATR0810G058 Amborella trichopoda HOM05D004403 ORTHO05D006164 3.1e-06 57.0 274 23.7
BcaC04g23440 Brassica carinata HOM05D003635 ORTHO05D021615 9.0e-06 55.5 30 83.3
C09p08310 Brassica napus HOM05D003635 ORTHO05D021615 9.0e-06 55.5 30 83.3
BolC9t53741H Brassica oleracea HOM05D003635 ORTHO05D021615 9.0e-06 55.5 30 83.3


User provided reference genes

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