Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 0.0e+00 1097.4 538 100.0
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 9.9e-292 1006.1 542 91.1
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 5.3e-285 983.8 539 89.4
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 2.4e-277 958.4 537 88.1
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 2.5e-271 938.3 537 83.6
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 7.4e-271 936.8 540 83.7
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 2.6e-263 911.8 537 81.4
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 3.3e-263 911.4 540 82.2
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 4.8e-262 907.5 539 81.6
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 2.0e-260 902.1 537 81.2
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 3.8e-259 897.9 539 80.7
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 3.2e-258 894.8 539 79.2
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 4.2e-258 894.4 545 78.7
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 5.5e-258 894.0 539 79.2
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 3.6e-257 891.3 540 79.8
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 8.0e-257 890.2 539 79.8
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 7.4e-255 883.6 541 78.0
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 9.7e-255 883.2 539 78.7
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 1.7e-254 882.5 539 79.6
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 3.7e-254 881.3 539 79.4
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 6.3e-254 880.6 540 78.1
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 8.2e-254 880.2 540 78.3
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 4.1e-253 877.9 538 78.4
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 7.0e-253 877.1 539 79.0
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 9.1e-253 876.7 539 78.7
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 2.0e-252 875.5 539 79.2
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 3.5e-252 874.8 539 77.7
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 3.5e-252 874.8 539 78.7
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 7.7e-252 873.6 539 78.8
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 1.0e-251 873.2 538 78.3
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 1.7e-251 872.5 539 77.7
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 1.7e-251 872.5 539 77.6
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 1.1e-250 869.8 565 74.9
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 2.5e-250 868.6 539 78.5
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 3.2e-250 868.2 539 77.7
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 5.5e-250 867.5 549 77.4
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 7.2e-250 867.1 539 78.8
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 7.2e-250 867.1 526 78.7
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.2e-249 866.3 548 77.7
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 1.6e-249 865.9 539 78.7
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 2.1e-249 865.5 540 76.9
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 2.7e-249 865.1 539 78.5
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 3.6e-249 864.8 526 78.5
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 4.7e-249 864.4 544 78.5
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 6.1e-249 864.0 542 79.0
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 2.3e-248 862.1 542 77.1
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 3.0e-248 861.7 539 76.8
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.2e-247 859.8 561 75.4
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 3.3e-247 858.2 539 77.4
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 4.4e-247 857.8 574 74.4
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 1.3e-246 856.3 540 76.9
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 2.2e-246 855.5 539 77.2
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.1e-245 853.2 592 72.1
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 1.4e-245 852.8 538 76.6
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 2.4e-245 852.0 536 77.1
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 2.4e-245 852.0 552 76.3
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 3.1e-245 851.7 539 76.3
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 4.1e-245 851.3 590 72.9
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 7.0e-245 850.5 541 77.1
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 9.1e-245 850.1 562 73.8
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 1.6e-244 849.4 539 77.2
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 1.6e-244 849.4 539 77.2
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 2.0e-244 849.0 547 76.1
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 2.7e-244 848.6 527 77.8
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 3.8e-243 844.7 539 76.8
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 6.5e-243 844.0 536 76.7
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 8.5e-243 843.6 539 76.6
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 1.5e-242 842.8 537 77.7
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 1.9e-242 842.4 536 76.5
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 1.9e-242 842.4 524 76.9
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 1.9e-242 842.4 537 77.1
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 3.2e-242 841.6 536 77.1
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 9.4e-242 840.1 546 76.2
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 9.4e-242 840.1 543 75.5
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 6.1e-241 837.4 543 75.5
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 8.0e-241 837.0 536 75.9
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 1.0e-240 836.6 560 73.4
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.4e-240 836.3 539 77.4
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.8e-240 835.9 539 77.2
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 2.3e-240 835.5 563 72.8
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 5.2e-240 834.3 548 74.3
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 6.8e-240 833.9 526 77.0
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 8.8e-240 833.6 537 75.6
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 1.5e-239 832.8 563 72.8
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 4.4e-239 831.2 548 73.9
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 1.7e-238 829.3 542 75.3
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 6.3e-238 827.4 541 75.0
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 7.7e-236 820.5 524 75.6
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 1.0e-235 820.1 514 77.4
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 1.3e-235 819.7 527 76.7
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 6.6e-235 817.4 544 73.9
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 6.6e-235 817.4 544 73.9
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 8.6e-235 817.0 524 75.2
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 1.1e-234 816.6 545 73.6
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 2.8e-233 812.0 543 72.7
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 1.4e-232 809.7 469 82.5
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 2.3e-232 808.9 541 73.2
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.1e-229 800.0 546 72.5
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 7.0e-229 797.3 542 71.6
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 2.9e-227 792.0 483 78.1
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 5.0e-227 791.2 540 70.9
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 4.9e-222 774.6 541 71.5
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.4e-221 773.1 540 70.4
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 1.6e-220 769.6 539 69.2
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 1.2e-215 753.4 531 69.7
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 3.0e-211 738.8 476 73.5
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 4.7e-201 704.9 474 72.4
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 1.4e-200 703.4 415 79.0
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 8.9e-200 700.7 398 81.7
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.7e-195 686.4 435 76.8
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 8.4e-190 667.5 397 77.8
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 2.2e-182 642.9 419 75.7
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 5.6e-178 628.2 512 63.5
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 4.6e-172 608.6 332 84.3
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 3.7e-153 545.8 499 55.3
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.1e-146 524.2 417 64.3
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.5e-146 523.9 404 67.6
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 1.5e-146 523.9 460 55.9
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 8.2e-145 518.1 283 83.7
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 2.0e-130 470.3 409 59.4
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 1.3e-129 467.6 453 52.1
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 1.1e-128 464.5 346 65.9
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 6.1e-124 448.7 462 50.0
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 8.8e-123 444.9 339 66.4
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 3.7e-105 386.3 270 74.4
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.4e-90 336.7 234 74.4
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 6.6e-86 322.4 181 82.3
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 3.4e-82 310.1 182 79.7
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.7e-73 281.2 171 76.0
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 4.9e-57 226.5 134 76.9
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.3e-44 185.3 114 77.2
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 1.0e-38 165.6 102 75.5
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 5.0e-33 146.7 81 81.5
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 2.2e-25 121.3 68 82.4
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 1.4e-19 102.1 53 86.8
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 2.2e-17 94.7 50 80.0
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 3.2e-16 90.9 56 75.0
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 2.1e-15 88.2 67 62.7
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 2.1e-15 88.2 67 62.7
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 8.8e-14 82.8 65 64.6
CBR_g21303 Chara braunii HOM05D001677 ORTHO05D000002 5.5e-08 63.5 183 30.1


User provided reference genes

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