Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g084080 Pisum sativum HOM05D000188 ORTHO05D022542 1.9e-114 416.0 232 100.0
Psat2g175000 Pisum sativum HOM05D000188 ORTHO05D003976 4.4e-79 298.5 194 89.2
TPR.G22716 Trifolium pratense HOM05D000188 ORTHO05D003976 1.1e-77 293.9 194 87.6
Ca_24627_v3 Cicer arietinum L. HOM05D000188 ORTHO05D003976 2.0e-76 289.7 194 87.1
Phvul.002G003300 Phaseolus vulgaris HOM05D000188 ORTHO05D003976 2.3e-75 286.2 218 78.0
VMungo1215G0424 Vigna mungo HOM05D000188 ORTHO05D003976 2.3e-75 286.2 218 78.0
Lj2g0002868 Lotus japonicus HOM05D000188 ORTHO05D003976 3.0e-75 285.8 194 85.1
Glyma.01G202600 Glycine max HOM05D000188 ORTHO05D003976 1.5e-74 283.5 194 85.1
Glyma.11G040200 Glycine max HOM05D000188 ORTHO05D003976 1.9e-74 283.1 191 87.4
Lalb_Chr16g0379271 Lupinus albus HOM05D000188 ORTHO05D003976 2.2e-70 269.6 194 82.0
Lalb_Chr05g0214101 Lupinus albus HOM05D000188 ORTHO05D003976 3.2e-69 265.8 194 81.4
arahy.Tifrunner.gnm1.ann1.FN6SHM Arachis hypogaea HOM05D000188 ORTHO05D003976 3.5e-68 262.3 194 80.9
arahy.Tifrunner.gnm1.ann1.L380RS Arachis hypogaea HOM05D000188 ORTHO05D003976 3.5e-68 262.3 194 80.9
Lalb_Chr09g0323981 Lupinus albus HOM05D000188 ORTHO05D003976 7.8e-68 261.2 194 80.4
Medtr5g013820 Medicago truncatula HOM05D000188 ORTHO05D003976 7.8e-68 261.2 184 86.4
CiPaw.12G059100 Carya illinoinensis HOM05D000188 ORTHO05D003976 3.9e-67 258.8 193 80.3
QL12p007494 Quercus lobata HOM05D000188 ORTHO05D003976 3.3e-66 255.8 196 77.6
MD06G1042600 Malus domestica HOM05D000188 ORTHO05D003976 5.6e-66 255.0 196 78.6
Cfa012367 Carpinus fangiana HOM05D000188 ORTHO05D003976 9.5e-66 254.2 191 80.1
CSS0042114 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D003976 2.8e-65 252.7 191 78.5
GSVIVG01013247001 Vitis vinifera HOM05D000188 ORTHO05D003976 2.8e-65 252.7 196 77.6
Dinv28904 Davidia involucrata HOM05D000188 ORTHO05D003976 3.6e-65 252.3 196 76.0
Haze_08316 Corylus avellana HOM05D000188 ORTHO05D003976 1.1e-64 250.8 191 79.1
FvH4_5g20920 Fragaria vesca HOM05D000188 ORTHO05D003976 1.8e-64 250.0 196 76.5
FAN18G0956 Fragaria x ananassa HOM05D000188 ORTHO05D003976 1.8e-64 250.0 196 76.5
Manes.17G021900 Manihot esculenta HOM05D000188 ORTHO05D003976 2.4e-64 249.6 196 77.0
RcHm_v2.0_Chr7g0207971 Rosa chinensis HOM05D000188 ORTHO05D003976 2.4e-64 249.6 191 78.0
CiPaw.11G086500 Carya illinoinensis HOM05D000188 ORTHO05D003976 3.1e-64 249.2 194 79.4
Atru.chr6.1792 Acer truncatum HOM05D000188 ORTHO05D003976 4.0e-64 248.8 196 74.5
Prupe.5G049500 Prunus persica HOM05D000188 ORTHO05D003976 4.0e-64 248.8 196 78.1
FAN13G2517 Fragaria x ananassa HOM05D000188 ORTHO05D003976 1.2e-63 247.3 196 76.0
CANSAT21G0831 Cannabis sativa HOM05D000188 ORTHO05D003976 1.5e-63 246.9 196 76.5
Cc08_g01700 Coffea canephora HOM05D000188 ORTHO05D003976 4.4e-63 245.4 188 75.5
Duzib068G0921 Durio zibethinus HOM05D000188 ORTHO05D003976 4.4e-63 245.4 196 76.5
Lj2C248G9 Lonicera japonica HOM05D000188 ORTHO05D003976 4.4e-63 245.4 226 68.6
FAN04G1896 Fragaria x ananassa HOM05D000188 ORTHO05D003976 5.8e-63 245.0 196 75.0
Cpa.g.sc29.2 Carica papaya HOM05D000188 ORTHO05D003976 9.9e-63 244.2 191 77.5
CSS0041371 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D003976 1.3e-62 243.8 191 75.4
MD16G1268400 Malus domestica HOM05D000188 ORTHO05D003976 1.3e-62 243.8 196 76.5
Thecc.03G235600 Theobroma cacao HOM05D000188 ORTHO05D003976 1.3e-62 243.8 196 77.0
Duzib205G1433 Durio zibethinus HOM05D000188 ORTHO05D003976 4.9e-62 241.9 200 73.5
TWI81G0847 Tripterygium wilfordii HOM05D000188 ORTHO05D003976 8.4e-62 241.1 192 76.6
Nitab4.5_0001444g0010 Nicotiana tabacum HOM05D000188 ORTHO05D003976 3.2e-61 239.2 196 71.4
Peaxi162Scf00102g00730 Petunia axillaris HOM05D000188 ORTHO05D003976 4.1e-61 238.8 196 73.0
CAN.G845.27 Capsicum annuum HOM05D000188 ORTHO05D003976 5.4e-61 238.4 196 71.9
AUR62007211 Chenopodium quinoa HOM05D000188 ORTHO05D003976 5.4e-61 238.4 194 72.2
FAN08G2510 Fragaria x ananassa HOM05D000188 ORTHO05D003976 9.2e-61 237.7 208 60.6
Sabra03G0056200 Salix brachista HOM05D000188 ORTHO05D003976 9.2e-61 237.7 200 73.5
Solyc08g007110.4 Solanum lycopersicum HOM05D000188 ORTHO05D003976 9.2e-61 237.7 196 70.4
Sopen08g003060 Solanum pennellii HOM05D000188 ORTHO05D003976 9.2e-61 237.7 196 70.4
ClCG10G001940 Citrullus lanatus HOM05D000188 ORTHO05D003976 1.2e-60 237.3 202 71.8
MELO3C013879.2 Cucumis melo HOM05D000188 ORTHO05D003976 1.2e-60 237.3 202 71.3
CsaV3_3G002080 Cucumis sativus L. HOM05D000188 ORTHO05D003976 1.2e-60 237.3 202 71.3
Ciclev10031552m.g Citrus clementina HOM05D000188 ORTHO05D003976 2.1e-60 236.5 194 72.7
Potri.003G086400 Populus trichocarpa HOM05D000188 ORTHO05D003976 2.1e-60 236.5 200 73.0
PGR042G0017 Punica granatum HOM05D000188 ORTHO05D003976 3.5e-60 235.7 215 68.4
Gohir.D03G169400 Gossypium hirsutum HOM05D000188 ORTHO05D003976 3.0e-59 232.6 191 76.4
Gorai.003G179500 Gossypium raimondii HOM05D000188 ORTHO05D003976 3.0e-59 232.6 191 76.4
TWI15G0852 Tripterygium wilfordii HOM05D000188 ORTHO05D003976 6.6e-59 231.5 194 74.2
Gohir.A03G003000 Gossypium hirsutum HOM05D000188 ORTHO05D003976 8.7e-59 231.1 191 75.9
Potri.001G148100 Populus trichocarpa HOM05D000188 ORTHO05D003976 8.7e-59 231.1 196 74.5
Nitab4.5_0004832g0040 Nicotiana tabacum HOM05D000188 ORTHO05D003976 1.5e-58 230.3 203 66.5
Hund11293 Selenicereus undatus HOM05D000188 ORTHO05D003976 1.9e-58 229.9 191 73.3
Gohir.A08G160500 Gossypium hirsutum HOM05D000188 ORTHO05D003976 3.3e-58 229.2 196 60.7
EL10Ac5g12207 Beta vulgaris HOM05D000188 ORTHO05D003976 4.3e-58 228.8 196 73.0
Peaxi162Scf00084g00613 Petunia axillaris HOM05D000188 ORTHO05D003976 7.3e-58 228.0 196 68.9
CAN.G572.54 Capsicum annuum HOM05D000188 ORTHO05D003976 1.6e-57 226.9 193 71.0
Eucgr.E00323 Eucalyptus grandis HOM05D000188 ORTHO05D003976 2.1e-57 226.5 192 69.3
Nitab4.5_0008709g0020 Nicotiana tabacum HOM05D000188 ORTHO05D003976 2.1e-57 226.5 214 65.4
Sabra01G0117900 Salix brachista HOM05D000188 ORTHO05D003976 2.1e-57 226.5 182 76.9
Gohir.D08G180800 Gossypium hirsutum HOM05D000188 ORTHO05D003976 2.8e-57 226.1 196 60.2
Nitab4.5_0005487g0030 Nicotiana tabacum HOM05D000188 ORTHO05D003976 3.6e-57 225.7 214 65.0
Sabra01G0116400 Salix brachista HOM05D000188 ORTHO05D003976 3.6e-57 225.7 177 78.0
TWI60G1508 Tripterygium wilfordii HOM05D000188 ORTHO05D003976 3.6e-57 225.7 191 73.8
Sopen08g026010 Solanum pennellii HOM05D000188 ORTHO05D003976 4.7e-57 225.3 193 72.5
Lj8C288T9 Lonicera japonica HOM05D000188 ORTHO05D003976 6.2e-57 224.9 188 75.0
Hund14450 Selenicereus undatus HOM05D000188 ORTHO05D003976 1.8e-56 223.4 191 61.3
DCAR_005597 Daucus carota HOM05D000188 ORTHO05D003976 3.1e-56 222.6 196 72.4
Gorai.004G189700 Gossypium raimondii HOM05D000188 ORTHO05D003976 3.1e-56 222.6 196 59.2
DCAR_008305 Daucus carota HOM05D000188 ORTHO05D003976 6.9e-56 221.5 191 59.7
Sed0018558 Sechium edule HOM05D000188 ORTHO05D003976 6.9e-56 221.5 218 65.6
vmacro00364 Vaccinium macrocarpon HOM05D000188 ORTHO05D003976 9.0e-56 221.1 177 75.1
Solyc08g077420.3 Solanum lycopersicum HOM05D000188 ORTHO05D003976 1.2e-55 220.7 193 71.5
ECA233G4074 Erigeron canadensis HOM05D000188 ORTHO05D003976 2.0e-55 219.9 199 68.8
Nn6g33690 Nelumbo nucifera HOM05D000188 ORTHO05D003976 3.4e-55 219.2 208 66.8
Actinidia10875 Actinidia chinensis HOM05D000188 ORTHO05D003976 7.6e-55 218.0 192 74.0
Ah.12g053730 Amaranthus hybridus HOM05D000188 ORTHO05D003976 9.9e-55 217.6 177 61.6
THA.LOC104806689 Tarenaya hassleriana HOM05D000188 ORTHO05D003976 2.9e-54 216.1 214 55.6
HanXRQChr03g0086991 Helianthus annuus HOM05D000188 ORTHO05D003976 3.8e-54 215.7 192 59.9
Oeu039350.3 Olea europaea HOM05D000188 ORTHO05D003976 2.4e-53 213.0 212 63.2
Aqoxy3G02561 Aquilegia oxysepala HOM05D000188 ORTHO05D003976 7.1e-53 211.5 209 66.5
TAR629G0968 Trochodendron aralioides HOM05D000188 ORTHO05D003976 3.5e-52 209.1 191 69.1
ATR1136G154 Amborella trichopoda HOM05D000188 ORTHO05D003976 7.8e-52 208.0 209 63.6
vmacro14146 Vaccinium macrocarpon HOM05D000188 ORTHO05D003976 1.3e-51 207.2 197 63.5
Ah.07g199630 Amaranthus hybridus HOM05D000188 ORTHO05D003976 1.7e-51 206.8 209 53.6
Hma1.2p1_0414F.1_g147610 Hydrangea macrophylla HOM05D000188 ORTHO05D003976 2.3e-51 206.5 174 61.5
Migut.E00902 Erythranthe guttata HOM05D000188 ORTHO05D003976 4.3e-50 202.2 197 61.9
PSO782G3028 Papaver somniferum HOM05D000188 ORTHO05D003976 5.6e-50 201.8 215 52.6
Gorai.006G215300 Gossypium raimondii HOM05D000188 ORTHO05D003976 2.8e-49 199.5 191 69.1
PSO063G6653 Papaver somniferum HOM05D000188 ORTHO05D003976 2.8e-49 199.5 215 52.1
Gohir.A09G197800 Gossypium hirsutum HOM05D000188 ORTHO05D003976 6.2e-49 198.4 196 67.9
Rhsim07G0121100 Rhododendron simsii HOM05D000188 ORTHO05D003976 8.1e-49 198.0 195 62.6
Nn1g00669 Nelumbo nucifera HOM05D000188 ORTHO05D003976 2.6e-47 193.0 208 62.5
TAR469G0002 Trochodendron aralioides HOM05D000188 ORTHO05D003976 7.6e-47 191.4 179 67.6
Lsat_1_v5_gn_6_68181 Lactuca sativa HOM05D000188 ORTHO05D003976 1.3e-46 190.7 205 66.3
TAR375G0650 Trochodendron aralioides HOM05D000188 ORTHO05D003976 8.4e-46 188.0 173 69.9
CDE12G0177 Ceratophyllum demersum HOM05D000188 ORTHO05D003976 2.7e-44 183.0 191 53.4
AL8G11270 Arabidopsis lyrata HOM05D000188 ORTHO05D003976 1.0e-43 181.0 214 58.4
SEGI_12247 Sequoiadendron giganteum HOM05D000188 ORTHO05D003976 3.0e-43 179.5 215 57.7
CARHR174460 Cardamine hirsuta HOM05D000188 ORTHO05D003976 6.7e-43 178.3 214 55.1
Aa31LG9G5970 Aethionema arabicum HOM05D000188 ORTHO05D003976 8.7e-43 177.9 214 49.5
Os07g0495900 Oryza sativa ssp. japonica HOM05D000188 ORTHO05D003976 1.5e-42 177.2 196 50.0
Zm00001eb105540 Zea mays HOM05D000188 ORTHO05D003976 1.6e-41 173.7 205 45.9
AT5G47010 Arabidopsis thaliana HOM05D000188 ORTHO05D003976 1.4e-40 170.6 214 57.0
Sp2g11810 Schrenkiella parvula HOM05D000188 ORTHO05D003976 3.1e-40 169.5 213 47.9
Lsat_1_v5_gn_6_89421 Lactuca sativa HOM05D000188 ORTHO05D003976 5.3e-40 168.7 192 62.5
BraA02t08082Z Brassica rapa HOM05D000188 ORTHO05D003976 6.9e-40 168.3 223 47.1
BolC2t10853H Brassica oleracea HOM05D000188 ORTHO05D003976 1.2e-39 167.5 223 47.1
MBI04_g03344_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D003976 2.6e-39 166.4 196 49.0
A02p30660 Brassica napus HOM05D000188 ORTHO05D003976 4.5e-39 165.6 214 47.7
CDE06G0953 Ceratophyllum demersum HOM05D000188 ORTHO05D003976 5.8e-39 165.2 191 52.9
C02p48200 Brassica napus HOM05D000188 ORTHO05D003976 7.6e-39 164.9 214 47.7
AUR62018790 Chenopodium quinoa HOM05D000188 ORTHO05D003976 7.6e-39 164.9 158 69.0
Carub.0008s0082 Capsella rubella HOM05D000188 ORTHO05D003976 9.9e-39 164.5 213 55.4
Dinv25173 Davidia involucrata HOM05D000188 ORTHO05D003976 9.9e-39 164.5 218 45.9
MD04G1136100 Malus domestica HOM05D000188 ORTHO05D003976 1.7e-38 163.7 106 76.4
unitig_22.g5496 Utricularia gibba HOM05D000188 ORTHO05D003976 2.9e-38 162.9 218 51.8
Thhalv10000743m.g Eutrema salsugineum HOM05D000188 ORTHO05D003976 7.1e-37 158.3 172 50.6
COL.COLO4_17123 Corchorus olitorius HOM05D000188 ORTHO05D003976 4.6e-36 155.6 182 62.1
Rhsim11G0009100 Rhododendron simsii HOM05D000188 ORTHO05D003976 3.9e-35 152.5 131 74.8
SGA_v2.0_scaffold20G09241 Striga asiatica HOM05D000188 ORTHO05D003976 4.8e-33 145.6 219 47.9
Actinidia31479 Actinidia chinensis HOM05D000188 ORTHO05D003976 3.1e-32 142.9 193 44.6
Zm00001eb322020 Zea mays HOM05D000188 ORTHO05D003976 4.5e-31 139.0 198 41.4
Mapoly0029s0126 Marchantia polymorpha HOM05D000188 ORTHO05D003976 5.8e-31 138.7 192 49.0
TAR106G0001 Trochodendron aralioides HOM05D000188 ORTHO05D003976 1.4e-29 134.0 93 68.8
AagrBONN_evm.TU.Sc2ySwM_117.2896 Anthoceros agrestis HOM05D000188 ORTHO05D003976 1.9e-29 133.7 195 53.3
PGSC0003DMG400001863 Solanum tuberosum HOM05D000188 ORTHO05D003976 2.1e-28 130.2 193 39.9
TAR633G0798 Trochodendron aralioides HOM05D000188 ORTHO05D003976 3.5e-28 129.4 93 66.7
Lsat_1_v5_gn_3_43181 Lactuca sativa HOM05D000188 ORTHO05D022542 3.0e-27 126.3 129 69.8
SGA_v2.0_scaffold6G03173 Striga asiatica HOM05D000188 ORTHO05D003976 6.3e-25 118.6 199 39.2
Pp3c23_9370 Physcomitrium patens HOM05D000188 ORTHO05D003976 3.1e-24 116.3 196 44.9
Pp3c20_16510 Physcomitrium patens HOM05D000188 ORTHO05D003976 2.0e-23 113.6 208 39.4
Oeu053049.1 Olea europaea HOM05D000188 ORTHO05D003976 2.9e-22 109.8 102 54.9
BcaC03g16918 Brassica carinata HOM05D000188 ORTHO05D003976 2.5e-21 106.7 228 37.3
HPP92_014920 Vanilla planifolia HOM05D000188 ORTHO05D003976 3.6e-20 102.8 98 55.1
HPP92_014871 Vanilla planifolia HOM05D000188 ORTHO05D003976 7.9e-20 101.7 101 51.5
Sc01g0007820 Simmondsia chinensis HOM05D000188 ORTHO05D003976 7.4e-18 95.1 76 64.5
SHI07527 Sapria himalayana HOM05D000188 ORTHO05D003976 2.4e-16 90.1 177 35.0
Oeu019051.3 Olea europaea HOM05D000188 ORTHO05D003976 1.2e-15 87.8 67 62.7
Hma1.2p1_0414F.1_g147620 Hydrangea macrophylla HOM05D000188 ORTHO05D022542 2.0e-15 87.0 126 56.3
TAR629G1588 Trochodendron aralioides HOM05D000188 ORTHO05D003976 2.6e-15 86.7 68 61.8
TAR623G1066 Trochodendron aralioides HOM05D000188 ORTHO05D003976 3.4e-15 86.3 69 60.9
Gohir.D09G192400 Gossypium hirsutum HOM05D000188 ORTHO05D003976 1.2e-12 77.8 74 54.1
TAR543G0001 Trochodendron aralioides HOM05D000188 ORTHO05D022542 6.7e-11 72.0 89 68.5
HPP92_014927 Vanilla planifolia HOM05D000188 ORTHO05D022542 7.4e-10 68.6 70 50.0
CBR_g39626 Chara braunii HOM05D000188 ORTHO05D003976 2.2e-06 57.0 148 35.1
CBR_g8052 Chara braunii HOM05D000188 ORTHO05D003976 8.5e-06 55.1 142 41.5


User provided reference genes

Program Settings