Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 0.0e+00 1081.6 555 100.0
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 3.1e-248 861.7 579 78.9
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.9e-245 852.4 552 80.8
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.4e-240 836.3 581 77.3
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 1.4e-224 783.1 561 73.8
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 3.0e-219 765.4 561 70.6
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 1.2e-218 763.5 559 71.0
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 4.1e-216 755.0 561 70.1
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 3.3e-213 745.3 566 70.5
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 3.3e-213 745.3 563 70.9
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 1.5e-210 736.5 563 70.0
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 1.3e-166 590.5 458 68.3
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 2.3e-158 563.1 552 54.2
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 1.6e-156 557.0 561 54.2
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 5.0e-153 545.4 531 56.1
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 4.6e-151 538.9 564 52.0
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 7.9e-151 538.1 594 52.0
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.8e-150 537.0 562 52.0
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 2.2e-148 530.0 703 45.5
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 4.8e-148 528.9 561 52.4
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 8.2e-148 528.1 598 50.8
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 1.4e-147 527.3 560 51.4
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 1.2e-146 524.2 565 51.5
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 5.9e-146 521.9 563 52.8
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 8.8e-142 508.1 563 49.6
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 2.2e-140 503.4 561 49.7
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 6.3e-140 501.9 551 50.3
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 2.4e-139 500.0 562 51.4
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 1.5e-138 497.3 563 49.2
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 2.0e-138 496.9 565 49.0
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 1.3e-137 494.2 567 47.6
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 2.9e-137 493.0 576 50.3
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 2.5e-136 490.0 554 48.7
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 2.5e-136 490.0 568 49.5
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 4.2e-136 489.2 557 49.4
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 7.2e-136 488.4 562 48.4
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 2.7e-135 486.5 581 49.1
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 8.0e-135 485.0 560 48.2
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 2.6e-133 479.9 566 47.9
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 9.7e-133 478.0 568 46.5
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.8e-131 473.8 607 45.3
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 3.1e-131 473.0 562 48.0
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 1.6e-130 470.7 599 45.1
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.6e-130 470.7 559 46.0
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 1.6e-130 470.7 563 47.2
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 2.6e-130 469.9 563 46.4
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 5.9e-130 468.8 570 47.4
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 3.8e-129 466.1 563 46.7
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 5.0e-129 465.7 570 47.9
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 1.1e-128 464.5 592 46.6
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 1.5e-128 464.2 563 46.5
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.9e-128 463.8 555 46.8
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 4.2e-128 462.6 565 46.5
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 6.1e-127 458.8 546 48.4
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.0e-126 458.0 575 46.6
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 2.6e-125 453.4 562 44.8
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 7.5e-125 451.8 576 46.0
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 2.2e-124 450.3 568 46.1
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 6.3e-124 448.7 555 45.2
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 9.1e-123 444.9 558 46.6
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 2.7e-122 443.4 578 45.8
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 1.3e-121 441.0 562 44.7
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 1.7e-121 440.7 562 44.0
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 5.0e-121 439.1 563 46.7
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 8.5e-121 438.3 562 43.8
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 4.0e-118 429.5 563 43.3
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 2.6e-117 426.8 563 43.0
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 1.3e-116 424.5 556 46.4
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 4.8e-116 422.5 585 43.4
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.1e-115 421.4 561 44.7
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 7.0e-115 418.7 532 47.7
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 1.2e-114 417.9 547 43.1
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 2.0e-114 417.2 566 41.9
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 2.0e-114 417.2 545 45.3
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.0e-114 417.2 656 41.9
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 4.5e-114 416.0 541 45.3
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 2.5e-112 410.2 536 45.9
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 1.2e-111 407.9 532 47.2
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 3.4e-109 399.8 505 45.5
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 7.5e-109 398.7 496 46.8
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.4e-107 394.4 566 43.3
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 3.1e-107 393.3 494 46.8
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 4.9e-100 369.4 503 44.1
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 5.4e-99 365.9 507 44.0
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 2.0e-98 364.0 581 41.1
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 1.2e-95 354.8 578 38.4
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 2.0e-93 347.4 571 38.4
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 1.9e-91 340.9 331 51.4
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 2.3e-86 323.9 571 38.2
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 8.3e-84 315.5 509 39.3
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 5.4e-83 312.8 414 46.1
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 8.9e-78 295.4 415 43.1
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 4.2e-75 286.6 487 38.0
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 3.0e-73 280.4 348 45.4
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.3e-72 276.9 596 32.9
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.3e-72 276.6 447 39.8
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.7e-65 254.6 431 38.1
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 5.6e-64 249.6 413 37.5
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.4e-62 244.2 208 59.1
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 4.0e-62 243.4 476 35.9
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 4.0e-62 243.4 552 32.6
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 7.4e-56 222.6 191 57.6
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 7.6e-53 212.6 357 40.3
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 7.9e-50 202.6 209 53.6
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 2.0e-45 188.0 114 82.5
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.0e-44 185.7 129 68.2
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.0e-44 185.7 129 68.2
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 2.5e-43 181.0 603 30.2
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.1e-40 172.2 329 39.5
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.3e-39 168.7 138 62.3
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.8e-36 157.1 120 64.2
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 1.1e-35 155.6 236 41.9
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 1.4e-27 128.6 612 24.5
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.0e-25 122.5 159 42.8
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.0e-17 94.4 80 61.2
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 5.3e-14 83.6 111 39.6
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 9.1e-14 82.8 217 30.0
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.5e-12 76.6 48 70.8
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.8e-09 68.6 62 50.0
Dinv24123 Davidia involucrata HOM05D006560 ORTHO05D008164 1.1e-06 59.3 30 83.3


User provided reference genes

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