Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 2.3e-102 375.6 187 100.0
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 6.9e-83 310.8 171 92.4
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 2.9e-81 305.4 159 95.6
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.0e-78 297.0 160 92.5
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 9.7e-77 290.4 159 89.9
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 6.3e-76 287.7 231 68.8
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 5.9e-74 281.2 176 80.7
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 1.3e-73 280.0 159 86.2
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 1.7e-73 279.6 157 87.3
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 2.2e-73 279.3 157 87.3
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 3.8e-73 278.5 157 87.3
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 3.8e-73 278.5 157 87.3
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 8.5e-73 277.3 160 85.0
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 1.1e-72 276.9 159 84.9
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 1.1e-72 276.9 159 84.9
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 1.9e-72 276.2 159 84.9
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.2e-72 275.4 157 86.6
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.2e-72 275.4 157 86.6
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 3.2e-72 275.4 157 86.6
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 4.2e-72 275.0 159 84.9
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 4.2e-72 275.0 159 84.3
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 5.5e-72 274.6 159 84.3
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 7.2e-72 274.2 159 84.9
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.2e-71 273.5 157 86.6
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 1.2e-71 273.5 157 86.6
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 1.0e-70 270.4 157 84.7
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 1.8e-70 269.6 159 83.0
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 1.8e-70 269.6 157 84.7
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 81.6
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 82.9
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 7.4e-69 264.2 158 82.9
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.7e-69 263.8 157 82.2
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.7e-68 263.1 158 81.0
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 2.8e-68 262.3 159 81.8
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 3.7e-68 261.9 151 84.1
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.8e-68 261.5 158 81.0
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.8e-68 261.5 157 81.5
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 1.4e-67 260.0 160 80.0
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 3.1e-67 258.8 159 81.1
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 5.3e-67 258.1 159 79.9
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 5.3e-67 258.1 159 79.9
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 5.3e-67 258.1 159 79.9
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 5.3e-67 258.1 159 79.9
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 7.0e-67 257.7 159 79.2
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 7.0e-67 257.7 159 79.2
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 2.6e-66 255.8 157 79.6
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.1e-64 250.4 150 81.3
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 4.2e-64 248.4 159 78.0
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 2.7e-63 245.7 153 79.7
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 2.7e-63 245.7 153 79.7
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 1.5e-61 240.0 160 76.9
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 2.6e-61 239.2 153 77.1
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.6e-61 239.2 153 77.1
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 6.3e-60 234.6 151 79.5
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 6.3e-60 234.6 149 77.9
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 5.9e-58 228.0 158 73.4
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 4.4e-53 211.8 157 71.3
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 1.7e-49 199.9 151 67.5
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.7e-47 192.6 157 66.2
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 7.5e-45 184.5 108 83.3
BraSC58t46409Z Brassica rapa HOM05D000216 ORTHO05D001131 6.6e-33 144.8 100 73.0
Gorai.005G236000 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.0e-30 137.5 87 78.2
Gohir.A04G053721 Gossypium hirsutum HOM05D000216 ORTHO05D001131 3.1e-30 136.0 87 78.2
Gorai.002G188200 Gossypium raimondii HOM05D000216 ORTHO05D001131 9.2e-27 124.4 97 67.0
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 3.5e-26 122.5 66 89.4
Gohir.A01G160850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 3.5e-26 122.5 92 67.4
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 6.0e-26 121.7 64 92.2
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 6.0e-26 121.7 64 92.2
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 3.0e-25 119.4 66 86.4
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 3.9e-25 119.0 66 84.8
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 2.5e-24 116.3 64 87.5
Gohir.D01G151850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 4.3e-24 115.5 85 71.8
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 7.3e-24 114.8 62 87.1
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 9.5e-24 114.4 64 87.5
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 2.0e-21 106.7 146 41.8
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 2.0e-21 106.7 149 38.9
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 2.0e-21 106.7 149 38.9
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 2.0e-21 106.7 149 38.9
SMO299G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 2.0e-21 106.7 149 38.9
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 4.4e-21 105.5 53 94.3
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 5.8e-21 105.1 53 94.3
SMO237G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 5.8e-21 105.1 146 39.0
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 9.8e-21 104.4 62 85.5
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 2.9e-20 102.8 60 81.7
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 9.2e-19 97.8 52 86.5
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 1.6e-18 97.1 53 88.7
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 1.6e-18 97.1 53 88.7
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 2.7e-18 96.3 51 90.2
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 2.7e-18 96.3 53 86.8
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 4.6e-18 95.5 157 42.7
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 7.8e-18 94.7 53 84.9
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 2.5e-16 89.7 51 88.2
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 2.5e-16 89.7 98 60.2
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 3.3e-16 89.4 54 81.5
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 3.3e-16 89.4 54 77.8
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.3e-16 89.0 54 79.6
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 3.6e-15 85.9 53 79.2
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 3.1e-14 82.8 53 77.4
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 5.2e-14 82.0 101 39.6
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 9.9e-13 77.8 66 65.2
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.1e-11 74.3 51 72.5
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 7.1e-11 71.6 45 80.0
Migut.E00860 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.7e-10 69.7 33 93.9
CAN.G1243.1 Capsicum annuum HOM05D000216 ORTHO05D001131 7.8e-10 68.2 37 91.9
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 8.6e-09 64.7 34 85.3
BolSC44t60850H Brassica oleracea HOM05D000216 ORTHO05D001131 1.9e-08 63.5 42 69.0
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.3e-08 62.8 31 90.3
EL10Ac2g02739 Beta vulgaris HOM05D000216 ORTHO05D089997 8.9e-06 54.7 35 80.0
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 8.9e-06 54.7 53 58.5


User provided reference genes

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