Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 1.3e-134 483.0 244 100.0
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 7.9e-87 324.3 240 72.9
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 6.1e-79 298.1 227 71.4
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 3.9e-78 295.4 231 69.7
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 1.8e-75 286.6 231 68.8
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 2.0e-74 283.1 227 67.4
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 4.7e-71 271.9 240 62.1
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 7.9e-71 271.2 239 61.9
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 1.4e-70 270.4 227 64.3
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 1.8e-70 270.0 227 64.3
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 1.8e-70 270.0 227 64.3
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 3.0e-70 269.2 227 64.3
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 3.0e-70 269.2 227 64.3
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 3.9e-70 268.9 227 63.9
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 2.0e-69 266.5 227 63.4
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.6e-69 266.2 227 63.9
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.6e-69 266.2 227 63.9
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 2.6e-69 266.2 227 63.9
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 3.3e-69 265.8 227 62.6
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 7.4e-69 264.6 227 63.4
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 9.7e-69 264.2 227 63.9
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 9.7e-69 264.2 227 63.9
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 1.3e-68 263.8 227 63.0
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 1.3e-68 263.8 227 63.0
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 1.7e-68 263.5 227 63.0
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 6.3e-68 261.5 227 62.6
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 8.2e-68 261.2 227 62.6
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 1.4e-67 260.4 227 62.6
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 1.0e-65 254.2 232 60.3
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 1.0e-65 254.2 232 60.3
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 1.3e-65 253.8 227 61.2
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.9e-65 252.7 232 59.1
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 6.5e-65 251.5 228 60.1
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.5e-65 251.5 232 58.6
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 8.5e-65 251.1 232 58.6
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 1.4e-64 250.4 227 60.8
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.9e-64 250.0 227 59.9
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 2.5e-64 249.6 227 59.9
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 2.5e-64 249.6 227 59.9
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 2.5e-64 249.6 227 59.9
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 2.5e-64 249.6 227 59.9
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 2.5e-64 249.6 219 61.2
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 3.2e-64 249.2 227 59.5
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 3.2e-64 249.2 227 59.5
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 9.4e-64 247.7 227 59.5
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.1e-61 240.7 220 59.5
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 2.0e-61 240.0 227 59.0
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 7.4e-61 238.0 231 58.9
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 1.1e-59 234.2 221 58.8
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 1.1e-59 234.2 221 58.8
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 4.1e-59 232.3 220 57.3
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 1.6e-58 230.3 219 59.4
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 3.5e-58 229.2 221 57.5
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 3.5e-58 229.2 221 57.5
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 4.2e-56 222.2 221 57.0
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 6.7e-54 214.9 230 52.2
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 7.7e-50 201.4 227 52.0
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.2e-49 199.9 116 83.6
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 1.0e-46 191.0 219 49.8
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 5.7e-45 185.3 227 49.3
BraSC58t46409Z Brassica rapa HOM05D000216 ORTHO05D001131 4.7e-31 139.0 87 79.3
Gohir.A04G053721 Gossypium hirsutum HOM05D000216 ORTHO05D001131 2.3e-30 136.7 87 79.3
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 5.2e-30 135.6 74 87.8
Gorai.005G236000 Gossypium raimondii HOM05D000216 ORTHO05D001131 6.8e-30 135.2 87 78.2
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 1.5e-29 134.0 74 87.8
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 1.5e-29 134.0 74 87.8
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.0e-29 133.7 74 86.5
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 5.8e-29 132.1 74 83.8
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 4.1e-27 125.9 74 82.4
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 7.0e-27 125.2 72 81.9
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 2.0e-26 123.6 72 83.3
Gorai.002G188200 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.7e-26 123.2 97 67.0
Gohir.A01G160850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.0e-25 121.3 92 67.4
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 3.0e-25 119.8 61 93.4
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 3.9e-25 119.4 61 93.4
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.6e-24 115.5 65 83.1
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 9.5e-24 114.8 83 69.9
Gohir.D01G151850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 9.5e-24 114.8 85 71.8
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 1.6e-23 114.0 60 88.3
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 2.3e-22 110.2 61 86.9
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 2.3e-22 110.2 61 86.9
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 6.8e-22 108.6 61 85.2
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 6.8e-22 108.6 61 83.6
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 9.8e-21 104.8 62 80.6
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.9e-20 103.2 62 80.6
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.9e-20 102.4 67 76.1
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 4.9e-20 102.4 108 60.2
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 6.4e-20 102.1 61 83.6
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 6.4e-20 102.1 138 41.3
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.9e-19 100.5 140 40.0
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.9e-19 100.5 140 40.0
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.9e-19 100.5 140 40.0
SMO237G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.9e-19 100.5 140 40.0
SMO299G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.9e-19 100.5 140 40.0
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 3.2e-19 99.8 77 67.5
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 2.1e-18 97.1 61 78.7
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 1.3e-17 94.4 74 67.6
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 3.9e-17 92.8 74 68.9
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.9e-16 90.5 227 32.2
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 9.5e-16 88.2 53 83.0
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 3.6e-15 86.3 109 39.4
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.2e-13 81.3 42 88.1
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.4e-13 79.7 42 85.7
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.2e-10 71.2 51 68.6
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 2.7e-10 70.1 61 63.9
Migut.E00860 Erythranthe guttata HOM05D000216 ORTHO05D001131 7.8e-10 68.6 33 90.9
BolSC44t60850H Brassica oleracea HOM05D000216 ORTHO05D001131 3.0e-09 66.6 42 71.4
Eucgr.C02946 Eucalyptus grandis HOM05D000216 ORTHO05D001131 3.0e-09 66.6 32 90.6
CAN.G1243.1 Capsicum annuum HOM05D000216 ORTHO05D001131 3.9e-09 66.2 37 89.2
Nitab4.5_0000029g0010 Nicotiana tabacum HOM05D000216 ORTHO05D001131 3.1e-06 56.6 30 80.0
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 3.1e-06 56.6 30 76.7


User provided reference genes

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