Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 3.0e-151 538.5 279 100.0
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 8.1e-136 487.3 278 89.2
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 2.3e-130 469.2 276 85.9
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.6e-130 467.6 276 86.2
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 6.6e-130 467.6 276 86.2
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.5e-129 466.5 276 85.9
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 5.6e-129 464.5 276 85.9
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.2e-128 463.4 276 84.4
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 9.9e-126 453.8 276 85.5
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 1.3e-125 453.4 275 83.3
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 2.9e-125 452.2 272 81.6
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.2e-123 446.8 271 81.5
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 3.5e-123 445.3 277 79.8
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 4.6e-123 444.9 271 81.2
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 6.0e-123 444.5 277 78.3
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.7e-122 443.0 275 84.4
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 2.3e-122 442.6 277 79.4
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.5e-121 439.9 277 78.7
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 1.9e-121 439.5 275 78.5
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 4.3e-121 438.3 273 79.5
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 9.6e-121 437.2 286 77.3
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 4.7e-120 434.9 278 79.9
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 6.2e-120 434.5 275 80.4
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 8.1e-120 434.1 277 78.7
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.1e-119 433.7 256 82.8
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 1.1e-119 433.7 287 76.7
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 1.8e-119 433.0 271 80.8
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 5.2e-119 431.4 277 77.6
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 8.9e-119 430.6 269 79.6
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 8.9e-119 430.6 273 78.4
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 1.2e-118 430.3 287 77.4
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 2.0e-118 429.5 275 77.8
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 2.6e-118 429.1 292 75.3
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 4.4e-118 428.3 273 78.0
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 4.4e-118 428.3 272 78.3
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 7.6e-118 427.6 274 74.8
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 1.3e-117 426.8 285 77.2
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.7e-117 426.4 276 78.6
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.2e-117 426.0 276 76.4
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 2.2e-117 426.0 279 77.8
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.1e-116 423.7 284 78.5
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 1.4e-116 423.3 275 74.9
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 1.4e-116 423.3 277 77.3
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.4e-116 422.5 275 74.2
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 5.4e-116 421.4 284 74.6
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 7.1e-116 421.0 283 75.3
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 9.3e-116 420.6 274 75.9
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 3.5e-115 418.7 265 77.7
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 4.6e-115 418.3 278 74.8
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 3.0e-114 415.6 262 79.4
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 3.9e-114 415.2 316 67.7
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 5.1e-114 414.8 262 78.6
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 1.5e-113 413.3 266 77.4
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 2.1e-112 409.5 287 72.8
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 2.8e-112 409.1 269 77.0
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.4e-111 406.0 264 75.0
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 3.1e-111 405.6 279 71.7
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 2.0e-110 402.9 279 71.0
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 2.0e-110 402.9 213 90.1
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.6e-110 402.5 252 79.8
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 5.8e-110 401.4 262 76.0
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 3.8e-109 398.7 258 76.7
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 2.4e-108 396.0 275 72.4
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 2.4e-108 396.0 275 72.4
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 5.4e-108 394.8 269 72.1
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 7.1e-108 394.4 280 71.1
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 7.1e-108 394.4 261 74.7
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 7.1e-108 394.4 277 72.2
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 9.3e-108 394.0 262 74.0
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.2e-107 393.7 269 75.5
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 1.2e-107 393.7 271 71.6
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.1e-107 392.9 281 69.4
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 2.1e-107 392.9 255 74.1
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 2.7e-107 392.5 266 72.2
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 2.7e-107 392.5 275 72.0
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 2.7e-107 392.5 266 72.2
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 3.9e-106 388.7 273 71.1
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 7.4e-105 384.4 200 89.5
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.3e-104 383.6 268 71.6
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 3.1e-103 379.0 269 71.4
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 6.4e-101 371.3 296 66.6
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 4.2e-100 368.6 283 69.3
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.0e-98 364.0 282 66.7
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 3.9e-98 362.1 241 73.4
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 6.7e-98 361.3 275 67.6
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 8.7e-98 360.9 281 66.5
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 4.8e-96 355.1 292 66.1
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 6.9e-95 351.3 176 93.8
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 5.8e-94 348.2 254 71.7
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.0e-93 347.4 176 93.8
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 2.9e-93 345.9 274 66.1
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 1.1e-92 344.0 176 90.9
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 1.1e-92 344.0 276 66.7
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 7.1e-92 341.3 179 89.9
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 4.6e-91 338.6 246 73.2
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 2.5e-89 332.8 176 88.6
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 7.6e-86 321.2 189 79.9
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.5e-84 316.2 274 58.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.2e-84 315.8 304 59.9
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 9.3e-84 314.3 238 65.5
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.7e-83 312.8 198 78.3
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.9e-81 306.6 207 70.5
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 7.4e-81 304.7 204 75.5
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 1.4e-74 283.9 152 85.5
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.0e-73 280.0 286 56.6
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 9.7e-73 277.7 201 71.1
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 5.9e-70 268.5 212 66.0
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.0e-66 257.7 130 91.5
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.7e-64 249.2 257 55.6
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 5.3e-63 245.4 129 86.8
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.9e-60 236.9 213 55.4
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.0e-58 231.1 270 53.0
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 5.3e-55 218.8 128 75.0
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 3.1e-39 166.4 181 45.9
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 9.2e-39 164.9 292 34.9
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 3.5e-30 136.3 188 37.8
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 1.2e-22 111.3 83 69.9
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 4.6e-14 82.8 95 53.7
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.0e-13 80.1 128 42.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 1.9e-12 77.4 41 82.9
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.2e-11 74.7 43 74.4
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.2e-11 74.7 35 88.6
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 9.9e-09 65.1 34 85.3


User provided reference genes

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