Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G015300 Prunus persica HOM05D003957 ORTHO05D004833 7.0e-231 803.5 382 100.0
MD07G1012900 Malus domestica HOM05D003957 ORTHO05D004833 1.7e-216 755.7 383 93.2
MD02G1308500 Malus domestica HOM05D003957 ORTHO05D004833 7.2e-212 740.3 383 91.4
RcHm_v2.0_Chr1g0316511 Rosa chinensis HOM05D003957 ORTHO05D004833 2.8e-200 701.8 379 86.0
FvH4_7g01180 Fragaria vesca HOM05D003957 ORTHO05D004833 3.9e-197 691.4 379 85.5
Cfa010778 Carpinus fangiana HOM05D003957 ORTHO05D004833 8.3e-192 673.7 370 84.6
FAN06G1255 Fragaria x ananassa HOM05D003957 ORTHO05D004833 6.0e-190 667.5 379 83.6
FAN03G2622 Fragaria x ananassa HOM05D003957 ORTHO05D004833 7.8e-190 667.2 379 83.4
FAN10G3195 Fragaria x ananassa HOM05D003957 ORTHO05D004833 1.7e-189 666.0 379 83.1
CiPaw.14G000800 Carya illinoinensis HOM05D003957 ORTHO05D004833 2.3e-189 665.6 371 84.4
Dinv09346 Davidia involucrata HOM05D003957 ORTHO05D004833 8.6e-189 663.7 370 83.2
Oeu014587.1 Olea europaea HOM05D003957 ORTHO05D004833 9.5e-188 660.2 372 82.0
Ca_19580_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.6e-187 659.4 371 82.7
CsaV3_3G032090 Cucumis sativus L. HOM05D003957 ORTHO05D004833 4.7e-187 657.9 367 82.0
Eucgr.J01212 Eucalyptus grandis HOM05D003957 ORTHO05D004833 6.2e-187 657.5 370 82.7
MELO3C023982.2 Cucumis melo HOM05D003957 ORTHO05D004833 1.8e-186 656.0 367 82.0
Actinidia20662 Actinidia chinensis HOM05D003957 ORTHO05D004833 2.0e-185 652.5 372 82.0
ClCG10G012310 Citrullus lanatus HOM05D003957 ORTHO05D004833 5.8e-185 651.0 367 81.5
Lalb_Chr25g0282971 Lupinus albus HOM05D003957 ORTHO05D004833 9.2e-183 643.7 373 79.6
CSS0035789 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 2.1e-182 642.5 374 81.3
Sed0014830 Sechium edule HOM05D003957 ORTHO05D004833 2.1e-182 642.5 368 80.2
CiPaw.13G005800 Carya illinoinensis HOM05D003957 ORTHO05D004833 1.0e-181 640.2 370 82.2
Thecc.01G409500 Theobroma cacao HOM05D003957 ORTHO05D004833 1.3e-181 639.8 371 82.5
arahy.Tifrunner.gnm1.ann1.MG259H Arachis hypogaea HOM05D003957 ORTHO05D004833 1.7e-181 639.4 367 80.7
Cpa.g.sc125.12 Carica papaya HOM05D003957 ORTHO05D004833 3.0e-181 638.6 372 82.3
Lj3g0013934 Lotus japonicus HOM05D003957 ORTHO05D004833 5.1e-181 637.9 368 80.2
TPR.G3690 Trifolium pratense HOM05D003957 ORTHO05D004833 6.6e-181 637.5 371 80.3
Atru.chr11.2608 Acer truncatum HOM05D003957 ORTHO05D004833 8.6e-181 637.1 371 79.8
Ciclev10031578m.g Citrus clementina HOM05D003957 ORTHO05D004833 1.9e-180 636.0 372 80.1
Cc07_g18910 Coffea canephora HOM05D003957 ORTHO05D004833 1.9e-180 636.0 384 76.3
Psat5g208720 Pisum sativum HOM05D003957 ORTHO05D004833 1.9e-180 636.0 368 80.4
PGR044G1355 Punica granatum HOM05D003957 ORTHO05D004833 4.3e-180 634.8 385 78.4
Medtr4g037515 Medicago truncatula HOM05D003957 ORTHO05D004833 1.6e-179 632.9 379 79.2
arahy.Tifrunner.gnm1.ann1.X54W53 Arachis hypogaea HOM05D003957 ORTHO05D004833 2.1e-179 632.5 367 80.7
Nitab4.5_0008353g0020 Nicotiana tabacum HOM05D003957 ORTHO05D004833 2.1e-179 632.5 371 80.3
Gohir.D08G164700 Gossypium hirsutum HOM05D003957 ORTHO05D004833 3.6e-179 631.7 374 79.9
GSVIVG01032128001 Vitis vinifera HOM05D003957 ORTHO05D004833 3.6e-179 631.7 373 79.1
Glyma.08G090300 Glycine max HOM05D003957 ORTHO05D004833 8.1e-179 630.6 368 79.6
Gohir.A08G143700 Gossypium hirsutum HOM05D003957 ORTHO05D004833 1.4e-178 629.8 374 79.9
TWI73G1181 Tripterygium wilfordii HOM05D003957 ORTHO05D004833 1.8e-178 629.4 366 80.3
VMungo1080G1779 Vigna mungo HOM05D003957 ORTHO05D004833 1.8e-178 629.4 367 79.0
Phvul.011G009800 Phaseolus vulgaris HOM05D003957 ORTHO05D004833 6.8e-178 627.5 368 78.3
CANSAT80G0271 Cannabis sativa HOM05D003957 ORTHO05D004833 8.9e-178 627.1 374 79.4
Glyma.10G089600 Glycine max HOM05D003957 ORTHO05D004833 2.0e-177 625.9 368 78.5
Rhsim01G0129100 Rhododendron simsii HOM05D003957 ORTHO05D004833 2.0e-177 625.9 372 79.0
Peaxi162Scf00953g00417 Petunia axillaris HOM05D003957 ORTHO05D004833 2.6e-177 625.5 370 78.4
TWI09G1258 Tripterygium wilfordii HOM05D003957 ORTHO05D004833 7.5e-177 624.0 369 79.4
TPR.G35301 Trifolium pratense HOM05D003957 ORTHO05D004833 2.9e-176 622.1 365 78.6
Sed0012226 Sechium edule HOM05D003957 ORTHO05D004833 3.7e-176 621.7 367 77.9
Sopen01g034340 Solanum pennellii HOM05D003957 ORTHO05D004833 3.7e-176 621.7 368 78.8
Manes.10G140900 Manihot esculenta HOM05D003957 ORTHO05D004833 4.9e-176 621.3 371 78.2
Solyc01g087300.3 Solanum lycopersicum HOM05D003957 ORTHO05D004833 4.9e-176 621.3 368 78.8
MSTRG.20577 Avicennia marina HOM05D003957 ORTHO05D004833 6.4e-176 620.9 372 77.7
Phvul.005G024600 Phaseolus vulgaris HOM05D003957 ORTHO05D004833 6.4e-176 620.9 367 78.5
Lj3g0028128 Lotus japonicus HOM05D003957 ORTHO05D004833 2.4e-175 619.0 365 79.5
Medtr3g030890 Medicago truncatula HOM05D003957 ORTHO05D004833 4.1e-175 618.2 365 78.6
SalBow5G3453 Salvia bowleyana HOM05D003957 ORTHO05D004833 4.1e-175 618.2 370 77.8
COL.COLO4_04863 Corchorus olitorius HOM05D003957 ORTHO05D004833 7.1e-175 617.5 371 79.2
Nitab4.5_0002918g0090 Nicotiana tabacum HOM05D003531 ORTHO05D004833 7.1e-175 617.5 366 79.2
SalBow5G1725 Salvia bowleyana HOM05D003957 ORTHO05D004833 2.1e-174 615.9 370 77.6
Sopen01g034330 Solanum pennellii HOM05D003957 ORTHO05D004833 2.1e-174 615.9 370 77.6
Solyc01g087290.3 Solanum lycopersicum HOM05D003957 ORTHO05D004833 6.0e-174 614.4 370 77.8
PGSC0003DMG400006795 Solanum tuberosum HOM05D003957 ORTHO05D004833 6.0e-174 614.4 370 77.8
CAN.G219.36 Capsicum annuum HOM05D003957 ORTHO05D004833 1.3e-173 613.2 370 77.3
arahy.Tifrunner.gnm1.ann1.N7MVRX Arachis hypogaea HOM05D003957 ORTHO05D004833 3.0e-173 612.1 365 77.5
THA.LOC104809852 Tarenaya hassleriana HOM05D003957 ORTHO05D004833 1.9e-172 609.4 368 76.6
SGA_v2.0_scaffold119G32740 Striga asiatica HOM05D003957 ORTHO05D004833 3.3e-172 608.6 373 75.9
Potri.001G264900 Populus trichocarpa HOM05D003957 ORTHO05D004833 7.3e-172 607.4 382 75.7
VMungo1127G1153 Vigna mungo HOM05D003957 ORTHO05D004833 1.6e-171 606.3 406 71.2
Gorai.004G171700 Gossypium raimondii HOM05D003957 ORTHO05D004833 4.7e-171 604.7 412 72.1
QL04p008303 Quercus lobata HOM05D003957 ORTHO05D004833 2.4e-170 602.4 314 89.5
CAN.G219.37 Capsicum annuum HOM05D003957 ORTHO05D004833 4.0e-170 601.7 355 78.6
Ca_14452_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.5e-169 599.7 360 78.3
Ca_14453_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.5e-169 599.7 360 78.3
Nn2g15304 Nelumbo nucifera HOM05D003957 ORTHO05D004833 1.3e-168 596.7 369 75.9
Migut.B01290 Erythranthe guttata HOM05D003957 ORTHO05D004833 2.9e-168 595.5 374 74.9
Potri.009G059900 Populus trichocarpa HOM05D003957 ORTHO05D004833 2.9e-168 595.5 370 75.9
Sabra09G0044100 Salix brachista HOM05D003957 ORTHO05D004833 2.9e-168 595.5 373 75.1
TAR623G1381 Trochodendron aralioides HOM05D003957 ORTHO05D004833 8.4e-168 594.0 365 77.3
Hund21483 Selenicereus undatus HOM05D003957 ORTHO05D004833 1.1e-167 593.6 373 74.0
ECA248G0218 Erigeron canadensis HOM05D003957 ORTHO05D004833 1.4e-167 593.2 375 76.0
AUR62009393 Chenopodium quinoa HOM05D003957 ORTHO05D004833 1.9e-167 592.8 373 74.3
EL10Ac2g04341 Beta vulgaris HOM05D003531 ORTHO05D004354 3.2e-167 592.0 373 74.3
HanXRQChr01g0016501 Helianthus annuus HOM05D003957 ORTHO05D004833 7.1e-167 590.9 375 75.5
Sabra16G0162800 Salix brachista HOM05D003957 ORTHO05D004833 2.7e-166 589.0 411 70.1
Thhalv10004383m.g Eutrema salsugineum HOM05D003957 ORTHO05D004833 3.0e-165 585.5 365 74.0
AL8G20240 Arabidopsis lyrata HOM05D003957 ORTHO05D004833 3.9e-165 585.1 368 73.4
CARHR184310 Cardamine hirsuta HOM05D003957 ORTHO05D004833 8.7e-165 583.9 368 73.1
DCAR_003217 Daucus carota HOM05D003957 ORTHO05D004833 8.7e-165 583.9 375 73.6
MBI02_g05667_MAGBIO Magnolia biondii HOM05D003957 ORTHO05D004833 2.5e-164 582.4 385 70.6
AT5G47970 Arabidopsis thaliana HOM05D003957 ORTHO05D004833 3.3e-164 582.0 368 72.3
Carub.0008s0751 Capsella rubella HOM05D003957 ORTHO05D004833 3.3e-164 582.0 368 72.6
BolC7t44403H Brassica oleracea HOM05D003957 ORTHO05D004833 4.3e-164 581.6 361 74.2
A06p39430 Brassica napus HOM05D003957 ORTHO05D004833 5.6e-164 581.3 368 73.1
C07p38840 Brassica napus HOM05D003957 ORTHO05D004833 5.6e-164 581.3 368 73.4
BraA06t26858Z Brassica rapa HOM05D003957 ORTHO05D004833 5.6e-164 581.3 368 73.1
PSO339G1767 Papaver somniferum HOM05D003957 ORTHO05D004833 2.1e-163 579.3 373 73.2
PSO384G3990 Papaver somniferum HOM05D003957 ORTHO05D004833 3.6e-163 578.6 370 73.0
Sp2g18450 Schrenkiella parvula HOM05D003957 ORTHO05D004833 3.6e-163 578.6 361 73.4
THA.LOC104817580 Tarenaya hassleriana HOM05D003957 ORTHO05D004833 8.1e-163 577.4 373 71.3
AL5G46370 Arabidopsis lyrata HOM05D003957 ORTHO05D004833 4.0e-162 575.1 369 71.8
AT3G63510 Arabidopsis thaliana HOM05D003957 ORTHO05D004833 6.9e-162 574.3 372 71.5
Sp5g26390 Schrenkiella parvula HOM05D003957 ORTHO05D004833 1.5e-161 573.2 372 70.4
BcaC06g30833 Brassica carinata HOM05D003957 ORTHO05D004833 3.4e-161 572.0 361 74.0
Thhalv10023495m.g Eutrema salsugineum HOM05D003957 ORTHO05D004833 9.9e-161 570.5 369 69.9
Lsat_1_v5_gn_1_106241 Lactuca sativa HOM05D003957 ORTHO05D004833 1.3e-160 570.1 376 74.2
ATR0332G004 Amborella trichopoda HOM05D003957 ORTHO05D004833 2.2e-160 569.3 364 72.3
Aqoxy1G00278 Aquilegia oxysepala HOM05D003957 ORTHO05D004833 4.2e-159 565.1 383 68.4
BraA07t31319Z Brassica rapa HOM05D003957 ORTHO05D004833 7.1e-159 564.3 372 70.2
BcaB03g14880 Brassica carinata HOM05D003957 ORTHO05D004833 2.1e-158 562.8 368 69.6
BolC6t39590H Brassica oleracea HOM05D003957 ORTHO05D004833 5.1e-157 558.1 378 68.0
BcaC08g46558 Brassica carinata HOM05D003957 ORTHO05D004833 8.7e-157 557.4 372 68.8
A07p37580 Brassica napus HOM05D003957 ORTHO05D004833 3.6e-155 552.0 397 65.7
AUR62023075 Chenopodium quinoa HOM05D003957 ORTHO05D004833 1.8e-154 549.7 407 65.6
AUR62043481 Chenopodium quinoa HOM05D003957 ORTHO05D004833 1.8e-154 549.7 407 65.6
Aa31LG5G18360 Aethionema arabicum HOM05D003957 ORTHO05D004833 7.6e-153 544.3 384 66.1
C06p45340 Brassica napus HOM05D003957 ORTHO05D004833 7.6e-153 544.3 403 64.0
Os04g0278900 Oryza sativa ssp. japonica HOM05D003957 ORTHO05D004833 4.6e-150 535.0 352 69.6
Sc11g0009110 Simmondsia chinensis HOM05D003957 ORTHO05D004833 6.2e-147 524.6 322 76.1
arahy.Tifrunner.gnm1.ann1.74EFZ5 Arachis hypogaea HOM05D003957 ORTHO05D004833 3.1e-146 522.3 365 68.2
SEGI_24417 Sequoiadendron giganteum HOM05D003957 ORTHO05D004833 6.7e-141 504.6 366 65.0
DCAR_029679 Daucus carota HOM05D003957 ORTHO05D004833 9.6e-140 500.7 325 71.7
Zm00001eb087020 Zea mays HOM05D003957 ORTHO05D004833 1.4e-138 496.9 313 72.2
Psat7g196440 Pisum sativum HOM05D003957 ORTHO05D004833 2.9e-136 489.2 316 73.4
vmacro21189 Vaccinium macrocarpon HOM05D003957 ORTHO05D004833 5.0e-136 488.4 340 69.4
HPP92_026038 Vanilla planifolia HOM05D003957 ORTHO05D004833 6.1e-134 481.5 339 65.8
Lj7A573G28 Lonicera japonica HOM05D003957 ORTHO05D004833 9.7e-132 474.2 322 68.9
unitig_749.g14329 Utricularia gibba HOM05D003957 ORTHO05D004833 4.2e-127 458.8 365 61.9
Mapoly0013s0118 Marchantia polymorpha HOM05D003957 ORTHO05D004833 2.5e-124 449.5 344 60.2
Aa31LG10G17380 Aethionema arabicum HOM05D003957 ORTHO05D004833 4.3e-124 448.7 353 60.9
Glyma.05G135100 Glycine max HOM05D003957 ORTHO05D004833 2.4e-122 443.0 243 85.6
Pp3s97_50 Physcomitrium patens HOM05D003957 ORTHO05D004833 7.7e-121 438.0 338 59.8
Lalb_Chr01g0000361 Lupinus albus HOM05D003957 ORTHO05D004833 5.5e-119 431.8 260 78.1
Duzib138G0145 Durio zibethinus HOM05D003957 ORTHO05D004833 8.8e-117 424.5 371 60.9
SMO174G0131 Selaginella moellendorffii HOM05D003957 ORTHO05D004833 7.7e-113 411.4 322 58.7
Pp3c7_21950 Physcomitrium patens HOM05D003957 ORTHO05D004833 3.9e-109 399.1 382 52.6
AagrBONN_evm.TU.Sc2ySwM_117.3237 Anthoceros agrestis HOM05D003957 ORTHO05D004833 9.1e-106 387.9 287 62.7
CBR_g45512 Chara braunii HOM05D003957 ORTHO05D004833 1.7e-104 383.6 331 52.0
Carub.0005s3012 Capsella rubella HOM05D003957 ORTHO05D004833 3.2e-103 379.4 262 69.1
HPP92_013484 Vanilla planifolia HOM05D003957 ORTHO05D004833 1.7e-96 357.1 215 74.9
MCO14G372 Micromonas commoda HOM05D003957 ORTHO05D004833 8.0e-86 321.6 369 45.3
CARHR291460 Cardamine hirsuta HOM05D003957 ORTHO05D004833 1.2e-84 317.8 190 74.7
Oeu006567.1 Olea europaea HOM05D003957 ORTHO05D004833 9.8e-84 314.7 367 47.7
Aa31LG11G7420 Aethionema arabicum HOM05D003957 ORTHO05D004833 4.7e-70 269.2 152 81.6
Cre15.g636896 Chlamydomonas reinhardtii HOM05D003957 ORTHO05D004833 1.5e-63 247.7 563 28.8
FAN03G1487 Fragaria x ananassa HOM05D003957 ORTHO05D004833 1.1e-61 241.5 142 76.8
PRCOL_00006504 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 3.4e-60 236.5 340 37.9
PRCOL_00000364 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 7.8e-57 225.3 318 39.6
Aa31LG11G7410 Aethionema arabicum HOM05D003957 ORTHO05D004833 1.8e-53 214.2 153 62.7
MCO15G235 Micromonas commoda HOM05D003957 ORTHO05D004833 1.2e-52 211.5 278 40.6
CSS0043854 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 1.3e-48 198.0 133 66.9
Ah.00g001360 Amaranthus hybridus HOM05D003957 ORTHO05D004833 3.8e-43 179.9 148 55.4
HPP92_013483 Vanilla planifolia HOM05D003957 ORTHO05D004833 1.1e-39 168.3 136 57.4
unitig_749.g13713 Utricularia gibba HOM05D003957 ORTHO05D004833 3.6e-38 163.3 253 39.5
RcHm_v2.0_Chr1g0316481 Rosa chinensis HOM05D003957 ORTHO05D037444 8.7e-32 142.1 82 75.6
unitig_749.g13714 Utricularia gibba HOM05D003957 ORTHO05D004833 5.6e-31 139.4 85 74.1
PRCOL_00003547 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 2.1e-30 137.5 288 32.6
CSS0024453 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 5.3e-29 132.9 74 83.8
arahy.Tifrunner.gnm1.ann1.2RNN62 Arachis hypogaea HOM05D000368 ORTHO05D000289 1.3e-24 118.2 66 81.8
CSS0028199 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 1.5e-23 114.8 78 67.9
Haze_03193 Corylus avellana HOM05D000309 ORTHO05D000008 1.9e-23 114.4 60 86.7
vmacro21188 Vaccinium macrocarpon HOM05D003957 ORTHO05D004833 1.9e-23 114.4 82 65.9
Prupe.2G015100 Prunus persica HOM05D002736 ORTHO05D003882 5.7e-23 112.8 59 88.1
Sopen01g034450 Solanum pennellii HOM05D003957 ORTHO05D030633 7.4e-23 112.5 151 43.0
Solyc01g087410.4 Solanum lycopersicum HOM05D003531 ORTHO05D004354 1.4e-21 108.2 151 41.7
Ah.00g001340 Amaranthus hybridus HOM05D003957 ORTHO05D004833 1.9e-18 97.8 51 90.2
Cfa010780 Carpinus fangiana HOM05D003957 ORTHO05D004833 4.2e-18 96.7 49 87.8
Gohir.D13G107450 Gossypium hirsutum HOM05D003957 ORTHO05D004833 5.5e-18 96.3 82 61.0
Gorai.009G400700 Gossypium raimondii HOM05D003957 ORTHO05D004833 5.5e-18 96.3 50 88.0
Solyc01g087390.2 Solanum lycopersicum HOM05D003531 ORTHO05D004354 1.2e-17 95.1 144 38.9
Gorai.007G239900 Gossypium raimondii HOM05D003957 ORTHO05D004833 2.1e-17 94.4 82 61.0
Lalb_Chr01g0000371 Lupinus albus HOM05D003957 ORTHO05D004833 3.5e-17 93.6 49 85.7
CSS0008275 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 2.3e-16 90.9 54 79.6
Gohir.D04G098500 Gossypium hirsutum HOM05D003957 ORTHO05D004833 3.0e-16 90.5 51 82.4
Solyc01g087370.2 Solanum lycopersicum HOM05D003531 ORTHO05D030633 3.9e-16 90.1 144 38.2
Cfa010787 Carpinus fangiana HOM05D003957 ORTHO05D004833 8.7e-16 89.0 64 71.9
BolC6t39673H Brassica oleracea HOM05D003957 ORTHO05D004833 7.4e-15 85.9 69 60.9
QL04p008294 Quercus lobata HOM05D003957 ORTHO05D037444 2.6e-12 77.4 54 66.7
Cre09.g387319 Chlamydomonas reinhardtii HOM05D004284 ORTHO05D005503 6.5e-11 72.8 273 27.1
Sopen01g034430 Solanum pennellii HOM05D003957 ORTHO05D030633 2.5e-10 70.9 86 43.0
Thecc.09G345400 Theobroma cacao HOM05D003957 ORTHO05D037444 1.2e-09 68.6 53 62.3
Cre06.g284800 Chlamydomonas reinhardtii HOM05D004284 ORTHO05D044119 2.1e-09 67.8 194 29.9
Cre10.g423400 Chlamydomonas reinhardtii HOM05D004284 ORTHO05D044199 1.8e-08 64.7 196 26.5
Pp3c13_19950 Physcomitrium patens HOM05D004633 ORTHO05D005503 2.3e-08 64.3 142 32.4
Sopen01g034360 Solanum pennellii HOM05D003531 ORTHO05D004354 9.7e-07 58.9 66 51.5


User provided reference genes

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