Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_36410 Physcomitrium patens HOM05D001486 ORTHO05D004921 1.2e-138 496.5 254 100.0
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 8.3e-71 271.2 215 67.9
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 6.6e-52 208.4 188 60.6
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 6.4e-47 191.8 190 56.3
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 6.4e-47 191.8 199 53.3
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 1.4e-46 190.7 188 54.8
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 1.9e-46 190.3 190 55.3
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 1.9e-46 190.3 190 55.3
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 1.9e-46 190.3 190 55.3
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 3.2e-46 189.5 186 57.5
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 3.2e-46 189.5 190 55.3
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 3.2e-46 189.5 198 53.5
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 4.1e-46 189.1 190 54.7
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 5.4e-46 188.7 190 55.3
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 9.2e-46 188.0 190 54.7
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.2e-45 187.6 190 54.7
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 1.6e-45 187.2 190 53.7
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 1.6e-45 187.2 190 55.3
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 1.6e-45 187.2 199 52.3
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 2.0e-45 186.8 190 55.8
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 2.0e-45 186.8 190 54.2
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 2.0e-45 186.8 190 55.8
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 2.7e-45 186.4 190 53.7
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 2.7e-45 186.4 190 53.7
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 3.5e-45 186.0 186 54.3
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 4.6e-45 185.7 186 54.8
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 4.6e-45 185.7 190 53.7
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 6.0e-45 185.3 201 52.7
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 6.0e-45 185.3 190 54.2
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 6.0e-45 185.3 190 54.2
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 7.8e-45 184.9 186 54.8
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 7.8e-45 184.9 190 54.2
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 7.8e-45 184.9 190 53.7
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 7.8e-45 184.9 190 53.7
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 7.8e-45 184.9 190 53.2
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 7.8e-45 184.9 190 55.3
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 7.8e-45 184.9 190 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 1.0e-44 184.5 186 53.8
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 1.0e-44 184.5 188 53.7
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 1.0e-44 184.5 198 52.0
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 1.3e-44 184.1 190 54.2
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 1.3e-44 184.1 190 53.2
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 1.3e-44 184.1 190 53.2
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 1.3e-44 184.1 190 53.7
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 1.7e-44 183.7 190 53.7
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 1.7e-44 183.7 190 53.7
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 1.7e-44 183.7 190 53.7
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 2.3e-44 183.3 186 54.8
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 2.3e-44 183.3 190 53.7
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 2.3e-44 183.3 190 52.6
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 2.3e-44 183.3 190 53.7
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 3.0e-44 183.0 186 55.4
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 3.0e-44 183.0 190 53.2
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 3.0e-44 183.0 190 52.6
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 3.9e-44 182.6 189 54.0
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 3.9e-44 182.6 186 53.2
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 5.0e-44 182.2 190 52.6
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 5.0e-44 182.2 190 52.6
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 6.6e-44 181.8 190 54.2
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 6.6e-44 181.8 190 52.6
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 6.6e-44 181.8 186 53.2
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 6.6e-44 181.8 190 52.6
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 6.6e-44 181.8 190 53.2
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 6.6e-44 181.8 190 53.2
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 1.5e-43 180.6 190 52.1
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 1.5e-43 180.6 186 53.2
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 1.5e-43 180.6 190 52.1
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 1.9e-43 180.3 190 52.1
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 2.5e-43 179.9 186 53.2
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 2.5e-43 179.9 190 52.6
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 2.5e-43 179.9 186 53.8
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 2.5e-43 179.9 190 53.7
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 3.3e-43 179.5 190 53.2
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 4.3e-43 179.1 190 52.1
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 4.3e-43 179.1 186 52.7
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 5.6e-43 178.7 190 51.6
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 5.6e-43 178.7 186 52.2
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 5.6e-43 178.7 190 51.6
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 7.3e-43 178.3 190 52.6
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 9.5e-43 177.9 186 53.8
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 9.5e-43 177.9 186 52.7
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 1.2e-42 177.6 190 51.1
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 1.6e-42 177.2 190 52.1
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 6.2e-42 175.3 190 52.1
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 8.1e-42 174.9 186 53.2
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 8.1e-42 174.9 190 51.6
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 1.1e-41 174.5 190 51.6
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 1.1e-41 174.5 186 52.7
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 2.3e-41 173.3 186 52.2
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 3.1e-41 172.9 186 52.2
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 6.8e-41 171.8 186 52.2
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 6.8e-41 171.8 188 50.5
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 8.9e-41 171.4 216 46.8
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 8.9e-41 171.4 186 48.9
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 1.2e-40 171.0 186 52.2
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 1.2e-40 171.0 186 52.2
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 1.2e-40 171.0 186 52.2
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 2.0e-40 170.2 186 51.6
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 2.0e-40 170.2 186 51.6
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 2.0e-40 170.2 186 51.6
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 2.6e-40 169.9 186 51.1
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 3.4e-40 169.5 185 51.4
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 4.4e-40 169.1 186 51.6
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 5.8e-40 168.7 186 51.1
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 5.8e-40 168.7 186 51.1
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 5.8e-40 168.7 186 51.1
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 5.8e-40 168.7 186 51.1
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 5.8e-40 168.7 186 50.5
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 1.7e-39 167.2 186 50.5
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 2.9e-39 166.4 186 50.5
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 3.7e-39 166.0 173 49.7
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 3.7e-39 166.0 174 51.1
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 4.9e-39 165.6 186 48.9
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 6.4e-39 165.2 186 48.9
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 1.1e-38 164.5 155 54.2
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 3.2e-38 162.9 189 48.1
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 1.6e-37 160.6 196 49.5
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 8.6e-36 154.8 182 47.3
MD16G1018600 Malus domestica HOM05D001486 ORTHO05D004921 1.8e-33 147.1 170 51.8
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 6.8e-33 145.2 189 47.1
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 2.7e-29 133.3 174 46.6
Peaxi162Scf01152g00113 Petunia axillaris HOM05D001486 ORTHO05D004921 4.0e-25 119.4 189 41.8
RcHm_v2.0_Chr2g0167011 Rosa chinensis HOM05D001486 ORTHO05D004921 3.8e-23 112.8 156 44.9
CDE06G1153 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 2.1e-21 107.1 85 52.9
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 2.7e-21 106.7 156 44.2
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 2.1e-13 80.5 98 46.9
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 2.3e-12 77.0 105 48.6
GSVIVG01026805001 Vitis vinifera HOM05D001486 ORTHO05D004921 5.6e-11 72.4 71 46.5


User provided reference genes

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