Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c3_26410 Physcomitrium patens HOM05D006183 ORTHO05D007844 0.0e+00 1189.9 724 100.0
AagrBONN_evm.TU.Sc2ySwM_228.230 Anthoceros agrestis HOM05D006183 ORTHO05D007844 2.0e-207 726.5 628 59.1
Mapoly0020s0160 Marchantia polymorpha HOM05D006183 ORTHO05D007844 3.0e-206 722.6 665 71.3
SEGI_33423 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 1.5e-197 693.7 677 57.5
QL09p042323 Quercus lobata HOM05D006183 ORTHO05D007844 8.9e-195 684.5 641 58.5
Nitab4.5_0009671g0010 Nicotiana tabacum HOM05D006183 ORTHO05D007844 2.0e-194 683.3 649 57.5
Nitab4.5_0000326g0320 Nicotiana tabacum HOM05D006183 ORTHO05D007844 3.7e-193 679.1 650 58.5
Glyma.19G169500 Glycine max HOM05D006183 ORTHO05D007844 7.1e-192 674.9 628 62.4
Duzib133G1169 Durio zibethinus HOM05D006183 ORTHO05D007844 7.8e-191 671.4 639 57.9
ATR0751G065 Amborella trichopoda HOM05D006183 ORTHO05D007844 1.0e-190 671.0 633 54.8
Haze_24717 Corylus avellana HOM05D006183 ORTHO05D007844 1.7e-190 670.2 662 59.5
FAN15G0492 Fragaria x ananassa HOM05D006183 ORTHO05D007844 1.7e-190 670.2 646 58.5
Cfa002493 Carpinus fangiana HOM05D006183 ORTHO05D007844 3.0e-190 669.5 660 59.4
FAN24G0209 Fragaria x ananassa HOM05D006183 ORTHO05D007844 3.0e-190 669.5 642 60.7
Atru.chr5.1959 Acer truncatum HOM05D006183 ORTHO05D007844 3.9e-190 669.1 643 58.0
MELO3C012834.2 Cucumis melo HOM05D006183 ORTHO05D007844 5.1e-190 668.7 654 58.9
PGSC0003DMG400014711 Solanum tuberosum HOM05D006183 ORTHO05D007844 5.1e-190 668.7 657 56.9
RcHm_v2.0_Chr6g0286091 Rosa chinensis HOM05D006183 ORTHO05D007844 6.6e-190 668.3 645 58.0
FvH4_2g20290 Fragaria vesca HOM05D006183 ORTHO05D007844 1.1e-189 667.5 642 60.6
VMungo1383G1346 Vigna mungo HOM05D006183 ORTHO05D007844 1.1e-189 667.5 629 61.0
Hma1.2p1_2051F.1_g312550 Hydrangea macrophylla HOM05D006183 ORTHO05D007844 4.3e-189 665.6 642 58.4
MD10G1174900 Malus domestica HOM05D006183 ORTHO05D007844 4.3e-189 665.6 632 59.2
SMO117G0187 Selaginella moellendorffii HOM05D006183 ORTHO05D007844 5.6e-189 665.2 634 64.8
CSS0020724 Camellia sinensis var. sinensis HOM05D006183 ORTHO05D007844 1.2e-188 664.1 668 56.6
CsaV3_3G028460 Cucumis sativus L. HOM05D006183 ORTHO05D007844 3.6e-188 662.5 654 59.8
PSO210G4577 Papaver somniferum HOM05D006183 ORTHO05D007844 3.6e-188 662.5 633 59.2
Prupe.8G213600 Prunus persica HOM05D006183 ORTHO05D007844 3.6e-188 662.5 629 59.8
PGR044G1356 Punica granatum HOM05D006183 ORTHO05D007844 6.2e-188 661.8 647 56.0
Sopen06g002920 Solanum pennellii HOM05D006183 ORTHO05D007844 1.1e-187 661.0 662 56.3
Lj1A75T45 Lonicera japonica HOM05D006183 ORTHO05D007844 4.0e-187 659.1 657 57.5
Thecc.01G248600 Theobroma cacao HOM05D006183 ORTHO05D007844 5.2e-187 658.7 640 59.2
ClCG07G001450 Citrullus lanatus HOM05D006183 ORTHO05D007844 6.8e-187 658.3 675 58.2
Ca_08753_v3 Cicer arietinum L. HOM05D006183 ORTHO05D007844 8.9e-187 657.9 630 59.8
vmacro02713 Vaccinium macrocarpon HOM05D006183 ORTHO05D007844 2.0e-186 656.8 652 58.3
Cc01_g17710 Coffea canephora HOM05D006183 ORTHO05D007844 9.9e-186 654.4 663 55.4
Rhsim13G0040400 Rhododendron simsii HOM05D006183 ORTHO05D007844 9.9e-186 654.4 661 54.2
arahy.Tifrunner.gnm1.ann1.73B1UV Arachis hypogaea HOM05D006183 ORTHO05D007844 1.3e-185 654.1 643 61.3
arahy.Tifrunner.gnm1.ann1.P69TYL Arachis hypogaea HOM05D006183 ORTHO05D007844 1.3e-185 654.1 648 60.3
Phvul.001G166600 Phaseolus vulgaris HOM05D006183 ORTHO05D007844 1.3e-185 654.1 630 59.2
Medtr7g098900 Medicago truncatula HOM05D006183 ORTHO05D007844 2.2e-185 653.3 628 57.2
TPR.G20058 Trifolium pratense HOM05D006183 ORTHO05D007844 2.2e-185 653.3 628 61.3
Sed0027453 Sechium edule HOM05D006183 ORTHO05D007844 6.4e-185 651.7 656 60.8
CiPaw.04G191000 Carya illinoinensis HOM05D006183 ORTHO05D007844 1.4e-184 650.6 651 57.1
Gorai.001G237200 Gossypium raimondii HOM05D006183 ORTHO05D007844 1.9e-184 650.2 645 58.1
Aqoxy5G00112 Aquilegia oxysepala HOM05D006183 ORTHO05D007844 2.4e-184 649.8 493 63.9
Ciclev10019299m.g Citrus clementina HOM05D006183 ORTHO05D007844 2.4e-184 649.8 636 59.7
MSTRG.18360 Avicennia marina HOM05D006183 ORTHO05D007844 7.1e-184 648.3 691 55.1
Migut.D00486 Erythranthe guttata HOM05D006183 ORTHO05D007844 1.2e-183 647.5 671 55.3
Lj1g0002370 Lotus japonicus HOM05D006183 ORTHO05D007844 2.1e-183 646.7 631 58.0
Lalb_Chr20g0113511 Lupinus albus HOM05D006183 ORTHO05D007844 2.1e-183 646.7 627 58.2
Psat3g051320 Pisum sativum HOM05D006183 ORTHO05D007844 2.7e-183 646.4 628 58.6
THA.LOC104814536 Tarenaya hassleriana HOM05D006183 ORTHO05D007844 2.7e-183 646.4 667 59.5
Cpa.g.sc87.44 Carica papaya HOM05D006183 ORTHO05D007844 3.5e-183 646.0 638 56.3
Gohir.D07G209800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 1.7e-182 643.7 634 57.6
TAR636G3003 Trochodendron aralioides HOM05D006183 ORTHO05D007844 2.3e-182 643.3 686 53.5
Gohir.A07G203800 Gossypium hirsutum HOM05D006183 ORTHO05D007844 3.0e-182 642.9 642 57.5
Os10g0464100 Oryza sativa ssp. japonica HOM05D006183 ORTHO05D007844 1.9e-181 640.2 495 62.4
Lsat_1_v5_gn_5_180141 Lactuca sativa HOM05D006183 ORTHO05D007844 2.5e-181 639.8 667 52.8
GSVIVG01028442001 Vitis vinifera HOM05D006183 ORTHO05D007844 2.5e-181 639.8 632 59.7
Hund18298 Selenicereus undatus HOM05D006183 ORTHO05D007844 7.3e-181 638.3 648 56.3
HanXRQChr03g0066991 Helianthus annuus HOM05D006183 ORTHO05D007844 1.6e-180 637.1 494 63.4
Potri.014G193500 Populus trichocarpa HOM05D006183 ORTHO05D007844 1.6e-180 637.1 649 56.1
SGA_v2.0_scaffold1G00669 Striga asiatica HOM05D006183 ORTHO05D007844 2.1e-180 636.7 676 55.8
Dinv43057 Davidia involucrata HOM05D006183 ORTHO05D007844 4.8e-180 635.6 485 62.5
ECA248G2561 Erigeron canadensis HOM05D006183 ORTHO05D007844 4.8e-180 635.6 488 63.5
DCAR_018527 Daucus carota HOM05D006183 ORTHO05D007844 8.1e-180 634.8 642 52.0
Eucgr.K01415 Eucalyptus grandis HOM05D006183 ORTHO05D007844 1.4e-179 634.0 676 57.5
Sabra14G0143600 Salix brachista HOM05D006183 ORTHO05D007844 1.4e-179 634.0 654 53.8
Zm00001eb222270 Zea mays HOM05D006183 ORTHO05D007844 9.0e-179 631.3 482 62.4
EL10Ac7g17706 Beta vulgaris HOM05D006183 ORTHO05D007844 2.0e-178 630.2 642 54.4
AL3G53280 Arabidopsis lyrata HOM05D006183 ORTHO05D007844 1.4e-176 624.0 646 55.9
Thhalv10001927m.g Eutrema salsugineum HOM05D006183 ORTHO05D007844 1.9e-176 623.6 652 55.1
Sp3g33570 Schrenkiella parvula HOM05D006183 ORTHO05D007844 3.2e-176 622.9 653 54.4
SalBow4G1671 Salvia bowleyana HOM05D006183 ORTHO05D007844 5.4e-176 622.1 735 52.1
Carub.0003s3467 Capsella rubella HOM05D006183 ORTHO05D007844 7.1e-176 621.7 650 59.1
Sc17g0002990 Simmondsia chinensis HOM05D006183 ORTHO05D007844 7.1e-176 621.7 630 54.8
Solyc06g008110.4 Solanum lycopersicum HOM05D006183 ORTHO05D007844 1.2e-175 620.9 673 54.1
BcaC06g36716 Brassica carinata HOM05D006183 ORTHO05D007844 1.6e-175 620.5 628 56.1
BolC7t40519H Brassica oleracea HOM05D006183 ORTHO05D007844 1.6e-175 620.5 628 56.1
CARHR110860 Cardamine hirsuta HOM05D006183 ORTHO05D007844 1.6e-175 620.5 646 58.2
Peaxi162Scf00499g00067 Petunia axillaris HOM05D006183 ORTHO05D007844 1.6e-175 620.5 630 58.7
Aa31LG8G17320 Aethionema arabicum HOM05D006183 ORTHO05D007844 2.7e-175 619.8 650 57.8
BcaB03g16820 Brassica carinata HOM05D006183 ORTHO05D007844 2.7e-175 619.8 637 56.2
A07p00380 Brassica napus HOM05D006183 ORTHO05D007844 6.0e-175 618.6 634 54.9
AT2G20330 Arabidopsis thaliana HOM05D006183 ORTHO05D007844 7.9e-175 618.2 652 55.7
BraA07t27830Z Brassica rapa HOM05D006183 ORTHO05D007844 2.3e-174 616.7 634 54.7
C07p00800 Brassica napus HOM05D006183 ORTHO05D007844 8.7e-174 614.8 631 58.2
HPP92_025390 Vanilla planifolia HOM05D006183 ORTHO05D007844 1.1e-171 607.8 498 59.6
Oeu015440.1 Olea europaea HOM05D006183 ORTHO05D007844 2.4e-171 606.7 696 51.9
CBR_g29722 Chara braunii HOM05D006183 ORTHO05D007844 6.9e-171 605.1 502 60.0
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 6.9e-171 605.1 455 64.8
Manes.13G038900 Manihot esculenta HOM05D006183 ORTHO05D007844 2.0e-170 603.6 664 52.7
CDE02G0751 Ceratophyllum demersum HOM05D006183 ORTHO05D007844 5.8e-170 602.1 638 52.8
AUR62008815 Chenopodium quinoa HOM05D006183 ORTHO05D007844 9.9e-170 601.3 640 49.5
AUR62025425 Chenopodium quinoa HOM05D006183 ORTHO05D007844 1.3e-164 584.3 640 49.2
FAN27G0957 Fragaria x ananassa HOM05D006183 ORTHO05D007844 2.1e-164 583.6 443 64.3
SHI26778 Sapria himalayana HOM05D006183 ORTHO05D007844 2.5e-160 570.1 652 50.6
Lj1A75T44 Lonicera japonica HOM05D006183 ORTHO05D007844 2.1e-156 557.0 634 51.3
COL.COLO4_20954 Corchorus olitorius HOM05D006183 ORTHO05D007844 2.4e-155 553.5 647 47.3
Actinidia37559 Actinidia chinensis HOM05D006183 ORTHO05D007844 5.5e-144 515.8 547 58.3
SEGI_26680 Sequoiadendron giganteum HOM05D006183 ORTHO05D007844 2.2e-116 424.1 528 49.8
Actinidia30118 Actinidia chinensis HOM05D006183 ORTHO05D007844 1.0e-113 415.2 637 42.9
Cre04.g217750 Chlamydomonas reinhardtii HOM05D006183 ORTHO05D007844 1.6e-103 381.3 515 40.6
MD05G1186900 Malus domestica HOM05D006183 ORTHO05D007844 1.4e-102 378.3 552 42.2
MCO16G174 Micromonas commoda HOM05D006183 ORTHO05D007844 2.4e-99 367.5 504 42.1
Dinv19261 Davidia involucrata HOM05D006183 ORTHO05D007844 1.1e-91 342.0 466 47.9
unitig_22.g6309 Utricularia gibba HOM05D006183 ORTHO05D007844 7.3e-80 302.8 385 52.2
AagrBONN_evm.TU.Sc2ySwM_117.1688 Anthoceros agrestis HOM05D006183 ORTHO05D007844 8.1e-79 299.3 327 50.2
BcaNung04798 Brassica carinata HOM05D006183 ORTHO05D007844 5.4e-75 286.6 244 57.8
C09p15190 Brassica napus HOM05D006183 ORTHO05D007844 5.4e-75 286.6 244 57.8
BolC9t54425H Brassica oleracea HOM05D006183 ORTHO05D007844 5.4e-75 286.6 244 57.8
Rhsim08G0025400 Rhododendron simsii HOM05D006183 ORTHO05D007844 2.7e-74 284.3 365 46.0
PRCOL_00006356 Prasinoderma coloniale HOM05D006183 ORTHO05D007844 6.0e-50 203.4 535 29.7
Cfa024676 Carpinus fangiana HOM05D006183 ORTHO05D007844 1.9e-43 181.8 491 29.7
SHI26811 Sapria himalayana HOM05D006183 ORTHO05D007844 6.0e-42 176.8 339 34.5
AagrBONN_evm.TU.Sc2ySwM_117.1686 Anthoceros agrestis HOM05D006183 ORTHO05D007844 6.7e-41 173.3 106 78.3
unitig_22.g6310 Utricularia gibba HOM05D006183 ORTHO05D007844 6.9e-38 163.3 106 67.9
RcHm_v2.0_Chr6g0286201 Rosa chinensis HOM05D006183 ORTHO05D007844 3.0e-25 121.3 78 70.5
Pp3c3_26370 Physcomitrium patens HOM05D000715 ORTHO05D000024 1.5e-21 109.0 185 43.2
Pp3c13_21190 Physcomitrium patens HOM05D000715 ORTHO05D000024 4.4e-16 90.9 182 37.9
Dinv36951 Davidia involucrata HOM05D006183 ORTHO05D007844 9.4e-11 73.2 57 59.6
HPP92_028272 Vanilla planifolia HOM05D006183 ORTHO05D007844 3.3e-08 64.7 40 67.5
BcaB07g31601 Brassica carinata HOM05D006183 ORTHO05D007844 1.3e-07 62.8 64 51.6


User provided reference genes

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