Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c21_16740 Physcomitrium patens HOM05D004364 ORTHO05D006299 1.6e-115 419.5 214 100.0
Pp3c19_17130 Physcomitrium patens HOM05D004364 ORTHO05D006299 1.4e-34 150.6 190 49.5
SEGI_22005 Sequoiadendron giganteum HOM05D004364 ORTHO05D006299 2.0e-33 146.7 190 46.3
Cc05_g12790 Coffea canephora HOM05D004364 ORTHO05D006299 6.4e-32 141.7 190 46.3
Thhalv10020069m.g Eutrema salsugineum HOM05D004364 ORTHO05D006299 4.1e-31 139.0 190 45.8
CARHR096430 Cardamine hirsuta HOM05D004364 ORTHO05D006299 5.4e-31 138.7 190 44.7
AUR62029293 Chenopodium quinoa HOM05D004364 ORTHO05D006299 2.0e-30 136.7 189 47.1
Mapoly0028s0083 Marchantia polymorpha HOM05D004364 ORTHO05D006299 2.7e-30 136.3 191 44.5
AUR62041167 Chenopodium quinoa HOM05D004364 ORTHO05D006299 3.5e-30 136.0 190 46.3
AL3G34510 Arabidopsis lyrata HOM05D004364 ORTHO05D006299 1.0e-29 134.4 190 43.7
AT3G20630 Arabidopsis thaliana HOM05D004364 ORTHO05D006299 1.0e-29 134.4 190 43.7
Sp3g18670 Schrenkiella parvula HOM05D004364 ORTHO05D006299 1.0e-29 134.4 190 44.2
BcaB04g19118 Brassica carinata HOM05D004364 ORTHO05D006299 3.9e-29 132.5 190 43.2
C05p43630 Brassica napus HOM05D004364 ORTHO05D006299 3.9e-29 132.5 190 43.7
Carub.0003s2061 Capsella rubella HOM05D004364 ORTHO05D006299 3.9e-29 132.5 190 43.7
FvH4_3g21160 Fragaria vesca HOM05D004364 ORTHO05D006299 3.9e-29 132.5 190 42.1
FAN11G0387 Fragaria x ananassa HOM05D004364 ORTHO05D006299 3.9e-29 132.5 190 42.1
PSO210G4872 Papaver somniferum HOM05D004364 ORTHO05D006299 5.0e-29 132.1 190 43.7
A05p28190 Brassica napus HOM05D004364 ORTHO05D006299 6.6e-29 131.7 190 43.7
FAN21G1304 Fragaria x ananassa HOM05D004364 ORTHO05D006299 6.6e-29 131.7 190 41.6
PSO832G2674 Papaver somniferum HOM05D004364 ORTHO05D006299 6.6e-29 131.7 190 43.7
Ah.04g165340 Amaranthus hybridus HOM05D004364 ORTHO05D006299 8.6e-29 131.3 189 43.9
BolC5t33082H Brassica oleracea HOM05D004364 ORTHO05D006299 8.6e-29 131.3 190 43.2
FAN25G2975 Fragaria x ananassa HOM05D004364 ORTHO05D006299 8.6e-29 131.3 190 42.1
Nn1g06827 Nelumbo nucifera HOM05D004364 ORTHO05D006299 8.6e-29 131.3 190 44.2
Oeu060533.1 Olea europaea HOM05D004364 ORTHO05D006299 8.6e-29 131.3 190 42.6
arahy.Tifrunner.gnm1.ann1.19RIMK Arachis hypogaea HOM05D004364 ORTHO05D006299 1.1e-28 131.0 190 44.7
arahy.Tifrunner.gnm1.ann1.B7TU6S Arachis hypogaea HOM05D004364 ORTHO05D006299 1.1e-28 131.0 190 44.7
FAN16G3737 Fragaria x ananassa HOM05D004364 ORTHO05D006299 1.1e-28 131.0 190 42.6
BcaC01g03545 Brassica carinata HOM05D004364 ORTHO05D006299 1.5e-28 130.6 190 42.1
C03p51230 Brassica napus HOM05D004364 ORTHO05D006299 1.5e-28 130.6 190 42.1
BolC3t17413H Brassica oleracea HOM05D004364 ORTHO05D006299 1.5e-28 130.6 190 42.1
THA.LOC104816919 Tarenaya hassleriana HOM05D004364 ORTHO05D006299 1.5e-28 130.6 190 43.7
BcaB06g26128 Brassica carinata HOM05D004364 ORTHO05D006299 2.5e-28 129.8 190 43.2
BraA05t21700Z Brassica rapa HOM05D004364 ORTHO05D006299 2.5e-28 129.8 190 42.6
MSTRG.12935 Avicennia marina HOM05D004364 ORTHO05D006299 3.3e-28 129.4 190 43.2
A03p41850 Brassica napus HOM05D004364 ORTHO05D006299 3.3e-28 129.4 190 42.1
BraA03t13338Z Brassica rapa HOM05D004364 ORTHO05D006299 3.3e-28 129.4 190 42.1
Eucgr.F01066 Eucalyptus grandis HOM05D004364 ORTHO05D006299 3.3e-28 129.4 190 43.7
Zm00001eb336890 Zea mays HOM05D004364 ORTHO05D006299 3.3e-28 129.4 190 43.7
Migut.H01895 Erythranthe guttata HOM05D004364 ORTHO05D006299 4.3e-28 129.0 190 42.1
Prupe.4G192200 Prunus persica HOM05D004364 ORTHO05D006299 4.3e-28 129.0 190 42.1
HanXRQChr03g0076071 Helianthus annuus HOM05D004364 ORTHO05D006299 5.6e-28 128.6 190 42.1
MD11G1234900 Malus domestica HOM05D004364 ORTHO05D006299 5.6e-28 128.6 190 42.6
SGA_v2.0_scaffold9G04963 Striga asiatica HOM05D004364 ORTHO05D006299 7.3e-28 128.3 190 41.6
SMO347G0465 Selaginella moellendorffii HOM05D004364 ORTHO05D006299 9.5e-28 127.9 191 42.9
Hund02178 Selenicereus undatus HOM05D004364 ORTHO05D006299 9.5e-28 127.9 189 43.9
Aa31LG8G7430 Aethionema arabicum HOM05D004364 ORTHO05D006299 1.6e-27 127.1 196 43.9
HanXRQChr13g0407291 Helianthus annuus HOM05D004364 ORTHO05D006299 1.6e-27 127.1 190 42.1
Cfa020489 Carpinus fangiana HOM05D004364 ORTHO05D006299 2.1e-27 126.7 190 42.6
Hma1.2p1_0015F.1_g010280 Hydrangea macrophylla HOM05D004364 ORTHO05D006299 2.1e-27 126.7 190 43.2
Lsat_1_v5_gn_0_5341 Lactuca sativa HOM05D004364 ORTHO05D006299 2.1e-27 126.7 191 41.9
Phvul.011G156100 Phaseolus vulgaris HOM05D004364 ORTHO05D006299 2.1e-27 126.7 190 43.2
VMungo1127G0244 Vigna mungo HOM05D004364 ORTHO05D006299 2.1e-27 126.7 190 42.1
CSS0001646 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 2.8e-27 126.3 190 42.1
Atru.chr2.2938 Acer truncatum HOM05D004364 ORTHO05D006299 3.6e-27 125.9 190 43.7
QL08p017220 Quercus lobata HOM05D004364 ORTHO05D006299 3.6e-27 125.9 190 43.2
GSVIVG01014465001 Vitis vinifera HOM05D004364 ORTHO05D006299 3.6e-27 125.9 190 42.6
MELO3C018182.2 Cucumis melo HOM05D004364 ORTHO05D006299 4.7e-27 125.6 190 41.6
CsaV3_3G044300 Cucumis sativus L. HOM05D004364 ORTHO05D006299 4.7e-27 125.6 190 41.6
RcHm_v2.0_Chr5g0036241 Rosa chinensis HOM05D004364 ORTHO05D006299 4.7e-27 125.6 190 41.1
TAR626G1658 Trochodendron aralioides HOM05D004364 ORTHO05D006299 4.7e-27 125.6 190 43.2
Ciclev10007478m.g Citrus clementina HOM05D004364 ORTHO05D006299 6.2e-27 125.2 190 43.2
Solyc07g063650.4 Solanum lycopersicum HOM05D004364 ORTHO05D006299 6.2e-27 125.2 190 42.6
ATR1132G023 Amborella trichopoda HOM05D004364 ORTHO05D006299 8.1e-27 124.8 190 40.5
Glyma.12G146600 Glycine max HOM05D004364 ORTHO05D006299 8.1e-27 124.8 190 41.1
ClCG11G018570 Citrullus lanatus HOM05D004364 ORTHO05D006299 1.1e-26 124.4 190 41.1
MD03G1217200 Malus domestica HOM05D004364 ORTHO05D006299 1.1e-26 124.4 190 41.6
Os01g0177200 Oryza sativa ssp. japonica HOM05D004364 ORTHO05D006299 1.1e-26 124.4 190 41.1
ECA240G1374 Erigeron canadensis HOM05D004364 ORTHO05D006299 1.4e-26 124.0 190 41.1
Sed0018829 Sechium edule HOM05D004364 ORTHO05D006299 1.4e-26 124.0 190 40.5
CANSAT11G0334 Cannabis sativa HOM05D004364 ORTHO05D006299 1.8e-26 123.6 190 42.1
COL.COLO4_09498 Corchorus olitorius HOM05D004364 ORTHO05D006299 1.8e-26 123.6 189 40.7
Dinv22351 Davidia involucrata HOM05D004364 ORTHO05D006299 1.8e-26 123.6 190 42.1
Duzib170G0088 Durio zibethinus HOM05D004364 ORTHO05D006299 1.8e-26 123.6 189 40.7
Lj8C162G4 Lonicera japonica HOM05D004364 ORTHO05D006299 1.8e-26 123.6 198 40.9
Sopen07g031830 Solanum pennellii HOM05D004364 ORTHO05D006299 1.8e-26 123.6 190 40.0
Cpa.g.sc12.20 Carica papaya HOM05D004364 ORTHO05D006299 2.3e-26 123.2 190 42.1
CiPaw.11G178500 Carya illinoinensis HOM05D004364 ORTHO05D006299 2.3e-26 123.2 190 42.6
Glyma.06G255000 Glycine max HOM05D004364 ORTHO05D006299 2.3e-26 123.2 190 40.0
Potri.011G125800 Populus trichocarpa HOM05D004364 ORTHO05D006299 2.3e-26 123.2 190 40.5
PGR083G1074 Punica granatum HOM05D004364 ORTHO05D006299 2.3e-26 123.2 190 43.2
Lj3g0027191 Lotus japonicus HOM05D004364 ORTHO05D006299 3.1e-26 122.9 190 42.6
Aqoxy1G03944 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 4.0e-26 122.5 190 41.6
Lalb_Chr02g0159341 Lupinus albus HOM05D004364 ORTHO05D006299 4.0e-26 122.5 191 41.9
Nitab4.5_0000297g0190 Nicotiana tabacum HOM05D004364 ORTHO05D006299 5.2e-26 122.1 239 35.6
TPR.G32881 Trifolium pratense HOM05D004364 ORTHO05D006299 5.2e-26 122.1 190 42.6
CDE01G0428 Ceratophyllum demersum HOM05D004364 ORTHO05D006299 8.9e-26 121.3 208 39.9
Sc16g0006700 Simmondsia chinensis HOM05D004364 ORTHO05D006299 8.9e-26 121.3 190 41.1
Thecc.07G069000 Theobroma cacao HOM05D004364 ORTHO05D006299 1.2e-25 120.9 189 40.2
Manes.03G117700 Manihot esculenta HOM05D004364 ORTHO05D006299 1.5e-25 120.6 190 38.9
Gohir.D08G031200 Gossypium hirsutum HOM05D004364 ORTHO05D006299 2.0e-25 120.2 189 41.3
vmacro09573 Vaccinium macrocarpon HOM05D004364 ORTHO05D006299 2.0e-25 120.2 190 41.1
DCAR_008692 Daucus carota HOM05D004364 ORTHO05D006299 2.6e-25 119.8 190 41.1
Gorai.004G028800 Gossypium raimondii HOM05D004364 ORTHO05D006299 2.6e-25 119.8 189 41.3
TWI39G0400 Tripterygium wilfordii HOM05D004364 ORTHO05D006299 2.6e-25 119.8 190 40.5
BcaC05g28303 Brassica carinata HOM05D004364 ORTHO05D006299 3.4e-25 119.4 192 42.2
CAN.G162.111 Capsicum annuum HOM05D004364 ORTHO05D006299 3.4e-25 119.4 190 40.0
Gohir.A08G020600 Gossypium hirsutum HOM05D004364 ORTHO05D006299 3.4e-25 119.4 189 41.3
Lalb_Chr06g0175311 Lupinus albus HOM05D004364 ORTHO05D006299 3.4e-25 119.4 191 41.4
Ca_01795_v3 Cicer arietinum L. HOM05D004364 ORTHO05D006299 7.5e-25 118.2 190 41.1
Potri.001G408800 Populus trichocarpa HOM05D004364 ORTHO05D006299 7.5e-25 118.2 191 40.8
Medtr2g081180 Medicago truncatula HOM05D004364 ORTHO05D006299 2.9e-24 116.3 190 40.5
Psat5g247520 Pisum sativum HOM05D004364 ORTHO05D006299 4.9e-24 115.5 190 40.5
TAR624G0100 Trochodendron aralioides HOM05D004364 ORTHO05D006299 4.9e-24 115.5 182 40.1
EL10Ac4g08041 Beta vulgaris HOM05D004364 ORTHO05D006299 8.3e-24 114.8 189 41.8
Sabra11G0111700 Salix brachista HOM05D004364 ORTHO05D006299 1.9e-23 113.6 201 37.3
HPP92_005995 Vanilla planifolia HOM05D004364 ORTHO05D006299 1.9e-23 113.6 190 38.4
RhsimUnG0257500 Rhododendron simsii HOM05D004364 ORTHO05D006299 9.2e-23 111.3 196 39.3
Peaxi162Scf01216g00070 Petunia axillaris HOM05D004364 ORTHO05D006299 1.2e-22 110.9 163 41.1
Aqoxy5G02435 Aquilegia oxysepala HOM05D004364 ORTHO05D006299 2.7e-22 109.8 192 42.2
Nitab4.5_0001386g0060 Nicotiana tabacum HOM05D004364 ORTHO05D006299 2.7e-22 109.8 181 39.8
Nitab4.5_0000092g0270 Nicotiana tabacum HOM05D004364 ORTHO05D006299 1.0e-21 107.8 181 39.2
Manes.15G081800 Manihot esculenta HOM05D004364 ORTHO05D006299 8.6e-21 104.8 188 35.1
Haze_09550 Corylus avellana HOM05D004364 ORTHO05D006299 2.5e-20 103.2 235 33.6
unitig_21.g20140 Utricularia gibba HOM05D004364 ORTHO05D006299 1.2e-19 100.9 156 42.3
SalBow7G1127 Salvia bowleyana HOM05D004364 ORTHO05D006299 1.6e-19 100.5 251 31.9
CSS0013066 Camellia sinensis var. sinensis HOM05D004364 ORTHO05D006299 1.4e-15 87.4 149 40.9
Nitab4.5_0001252g0070 Nicotiana tabacum HOM05D004364 ORTHO05D006299 1.4e-15 87.4 174 36.2
SHI10080 Sapria himalayana HOM05D004364 ORTHO05D006299 1.0e-13 81.3 226 29.6
PRCOL_00003961 Prasinoderma coloniale HOM05D004364 ORTHO05D006299 1.7e-13 80.5 189 32.8
SEGI_32785 Sequoiadendron giganteum HOM05D004364 ORTHO05D014012 2.5e-12 76.6 77 49.4
TAR624G1198 Trochodendron aralioides HOM05D004364 ORTHO05D006299 2.1e-11 73.6 145 35.2
CBR_g17932 Chara braunii HOM05D004364 ORTHO05D006299 3.4e-09 66.2 67 50.7
Haze_26164 Corylus avellana HOM05D004364 ORTHO05D006299 5.8e-09 65.5 196 29.1
Cre02.g080350 Chlamydomonas reinhardtii HOM05D004364 ORTHO05D006299 2.1e-06 57.0 57 56.1


User provided reference genes

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