Gene: AT3G20630
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G20630
- Transcript Identifier AT3G20630.1
- Gene Type Coding gene
- Location Chr3 : 7203001-7208340 : negative
Gene Family Information
- ID HOM05D004364
- #Genes/#Species 164/97
- Phylogenetic origin
- ID ORTHO05D006299
- #Genes/#Species 144/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G20630.1
- symbol UBP14
- Alias ATUBP14,PER1,phosphate deficiency root hair defective1,TTN6,TITAN6
- uniprot Q8L6Y1
Descriptions
- Description ubiquitin-specific protease 14
- Computational description ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016579 | IEA | GOA Database | protein deubiquitination | |
GO:0016579 | IDA IBA | Gene Ontology | protein deubiquitination | 1 2 |
GO:0016579 | IEA | InterPro | protein deubiquitination | |
GO:0006508 | IEA | GOA Database | proteolysis | |
GO:0006511 | IEA | Gene Ontology | ubiquitin-dependent protein catabolic process | |
GO:0009734 | IMP | Gene Ontology | auxin-activated signaling pathway | 3 |
GO:0071370 | IGI | Gene Ontology | cellular response to gibberellin stimulus | 4 |
GO:0042127 | IMP | Gene Ontology | regulation of cell population proliferation | 4 |
GO:0009965 | IMP | Gene Ontology | leaf morphogenesis | 4 |
GO:0048767 | IMP | Gene Ontology | root hair elongation | 5 |
GO:0009793 | IMP | Gene Ontology | embryo development ending in seed dormancy | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004197 | IBA | Gene Ontology | cysteine-type endopeptidase activity | 2 |
GO:0005515 | IPI | Gene Ontology | protein binding | 6 |
GO:0005515 | IEA | InterPro | protein binding | |
GO:0004843 | IEA | GOA Database | thiol-dependent deubiquitinase | |
GO:0004843 | IDA IBA | Gene Ontology | thiol-dependent deubiquitinase | 1 2 |
GO:0004843 | IEA | InterPro | thiol-dependent deubiquitinase | |
GO:0008270 | IEA | Gene Ontology | zinc ion binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0008233 | IEA | GOA Database | peptidase activity | |
GO:0008234 | IEA | GOA Database | cysteine-type peptidase activity | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:1990450 | IDA | Gene Ontology | linear polyubiquitin binding | 3 |
GO:0061815 | IDA | Gene Ontology | deubiquitinase, acting on linear ubiquitin | 3 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | IDA | GOA Database | cytosol | |
GO:0005829 | HDA IBA | Gene Ontology | cytosol | 2 7 |
GO:0005634 | IDA IBA | Gene Ontology | nucleus | 2 6 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR013083 | Zinc finger, RING/FYVE/PHD-type |
IPR041432 | Ubiquitinyl hydrolase, variant UBP zinc finger |
IPR001607 | Zinc finger, UBP-type |
IPR015940 | Ubiquitin-associated domain |
IPR001394 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase |
IPR038765 | Papain-like cysteine peptidase superfamily |
IPR016652 | Ubiquitinyl hydrolase |
IPR009060 | UBA-like superfamily |
Mapman id | Description |
---|---|
19.2.1.3.1.6 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.deubiquitinase component (GID6/UBP14) |