Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_19120 Physcomitrium patens HOM05D004152 ORTHO05D004878 1.4e-153 546.2 274 100.0
Pp3c1_29090 Physcomitrium patens HOM05D004152 ORTHO05D004878 8.5e-106 387.5 277 72.6
Mapoly0001s0104 Marchantia polymorpha HOM05D004152 ORTHO05D004878 1.3e-82 310.5 216 70.8
AagrBONN_evm.TU.Sc2ySwM_228.3330 Anthoceros agrestis HOM05D004152 ORTHO05D004878 1.4e-76 290.4 279 60.2
SMO274G0039 Selaginella moellendorffii HOM05D004152 ORTHO05D004878 3.3e-73 279.3 180 74.4
THA.LOC104824129 Tarenaya hassleriana HOM05D004152 ORTHO05D004878 9.5e-73 277.7 250 60.4
unitig_899.g15440 Utricularia gibba HOM05D004152 ORTHO05D004878 2.8e-72 276.2 178 73.6
Glyma.08G210500 Glycine max HOM05D004152 ORTHO05D004878 4.7e-72 275.4 176 73.9
Ciclev10021871m.g Citrus clementina HOM05D004152 ORTHO05D004878 8.1e-72 274.6 176 73.9
Atru.chr9.1286 Acer truncatum HOM05D004152 ORTHO05D004878 1.8e-71 273.5 217 61.3
Glyma.07G032200 Glycine max HOM05D004152 ORTHO05D004878 2.3e-71 273.1 176 72.2
Phvul.010G153800 Phaseolus vulgaris HOM05D004152 ORTHO05D004878 4.0e-71 272.3 204 64.2
Cpa.g.sc29.188 Carica papaya HOM05D004152 ORTHO05D004878 5.2e-71 271.9 177 72.9
SEGI_19785 Sequoiadendron giganteum HOM05D004152 ORTHO05D004878 5.2e-71 271.9 180 75.0
Aqoxy7G00694 Aquilegia oxysepala HOM05D004152 ORTHO05D004878 6.8e-71 271.6 176 71.6
TWI81G0703 Tripterygium wilfordii HOM05D004152 ORTHO05D004878 6.8e-71 271.6 174 73.6
VMungo0331G1163 Vigna mungo HOM05D004152 ORTHO05D004878 8.9e-71 271.2 186 68.8
Gohir.A04G110300 Gossypium hirsutum HOM05D004152 ORTHO05D004878 1.2e-70 270.8 217 62.2
Gorai.012G137200 Gossypium raimondii HOM05D004152 ORTHO05D004878 1.2e-70 270.8 180 71.7
PGR031G2826 Punica granatum HOM05D004152 ORTHO05D004878 1.2e-70 270.8 188 70.7
Gohir.D04G150500 Gossypium hirsutum HOM05D004152 ORTHO05D004878 1.5e-70 270.4 188 68.6
Gohir.D04G150600 Gossypium hirsutum HOM05D004152 ORTHO05D004878 1.5e-70 270.4 188 68.6
Haze_18794 Corylus avellana HOM05D004152 ORTHO05D004878 2.0e-70 270.0 186 69.9
arahy.Tifrunner.gnm1.ann1.Y2K32V Arachis hypogaea HOM05D004152 ORTHO05D004878 3.4e-70 269.2 176 72.7
Cfa019694 Carpinus fangiana HOM05D004152 ORTHO05D004878 3.4e-70 269.2 176 72.2
COL.COLO4_08312 Corchorus olitorius HOM05D004152 ORTHO05D004878 3.4e-70 269.2 174 73.6
Gorai.005G214700 Gossypium raimondii HOM05D004152 ORTHO05D004878 3.4e-70 269.2 183 70.5
TWI60G0584 Tripterygium wilfordii HOM05D004152 ORTHO05D004878 3.4e-70 269.2 209 64.1
Lalb_Chr25g0279491 Lupinus albus HOM05D004152 ORTHO05D004878 4.4e-70 268.9 174 72.4
Psat7g255640 Pisum sativum HOM05D004152 ORTHO05D004878 4.4e-70 268.9 174 71.8
CANSAT21G2552 Cannabis sativa HOM05D004152 ORTHO05D004878 7.5e-70 268.1 184 69.6
CiPaw.16G091100 Carya illinoinensis HOM05D004152 ORTHO05D004878 7.5e-70 268.1 174 74.1
MELO3C005518.2 Cucumis melo HOM05D004152 ORTHO05D004878 9.9e-70 267.7 186 68.3
Sabra03G0074600 Salix brachista HOM05D004152 ORTHO05D004878 9.9e-70 267.7 178 72.5
SalBow6G1227 Salvia bowleyana HOM05D004152 ORTHO05D004878 9.9e-70 267.7 186 68.3
SGA_v2.0_scaffold104G30172 Striga asiatica HOM05D004152 ORTHO05D004878 9.9e-70 267.7 180 71.1
Aqoxy7G00850 Aquilegia oxysepala HOM05D004152 ORTHO05D004878 1.3e-69 267.3 179 69.8
arahy.Tifrunner.gnm1.ann1.HAI1EF Arachis hypogaea HOM05D004152 ORTHO05D004878 1.3e-69 267.3 206 63.6
Duzib052G0353 Durio zibethinus HOM05D004152 ORTHO05D004878 1.3e-69 267.3 204 63.7
MSTRG.12117 Avicennia marina HOM05D004152 ORTHO05D004878 1.7e-69 266.9 188 67.6
HanXRQChr03g0088791 Helianthus annuus HOM05D004152 ORTHO05D004878 1.7e-69 266.9 190 67.4
Lj3g0007947 Lotus japonicus HOM05D004152 ORTHO05D004878 1.7e-69 266.9 174 71.8
Potri.003G107800 Populus trichocarpa HOM05D004152 ORTHO05D004878 1.7e-69 266.9 178 72.5
Thecc.02G150400 Theobroma cacao HOM05D004152 ORTHO05D004878 1.7e-69 266.9 210 63.8
Migut.A01125 Erythranthe guttata HOM05D004152 ORTHO05D004878 2.9e-69 266.2 178 71.3
Sed0004379 Sechium edule HOM05D004152 ORTHO05D004878 4.9e-69 265.4 180 70.6
CsaV3_5G004400 Cucumis sativus L. HOM05D004152 ORTHO05D004878 6.4e-69 265.0 176 71.6
EL10Ac5g12362 Beta vulgaris HOM05D004152 ORTHO05D004878 8.3e-69 264.6 216 61.1
Medtr4g011180 Medicago truncatula HOM05D004152 ORTHO05D004878 8.3e-69 264.6 174 70.7
AL4G41740 Arabidopsis lyrata HOM05D004152 ORTHO05D004878 1.1e-68 264.2 183 67.8
A03p23950 Brassica napus HOM05D004152 ORTHO05D004878 1.1e-68 264.2 183 68.3
C03p28570 Brassica napus HOM05D004152 ORTHO05D004878 1.1e-68 264.2 183 68.3
BraA03t11610Z Brassica rapa HOM05D004152 ORTHO05D004878 1.1e-68 264.2 183 68.3
Carub.0004s2557 Capsella rubella HOM05D004152 ORTHO05D004878 1.1e-68 264.2 183 68.3
Gohir.D02G191900 Gossypium hirsutum HOM05D004152 ORTHO05D004878 1.1e-68 264.2 183 69.9
HanXRQChr13g0417841 Helianthus annuus HOM05D004152 ORTHO05D004878 1.1e-68 264.2 209 61.2
Os02g0655300 Oryza sativa ssp. japonica HOM05D004152 ORTHO05D004878 1.1e-68 264.2 180 72.2
AT2G43090 Arabidopsis thaliana HOM05D004152 ORTHO05D004878 1.4e-68 263.8 183 67.8
ClCG01G004210 Citrullus lanatus HOM05D004152 ORTHO05D004878 1.4e-68 263.8 190 66.8
CARHR138160 Cardamine hirsuta HOM05D004152 ORTHO05D004878 1.9e-68 263.5 183 67.8
AUR62019969 Chenopodium quinoa HOM05D004152 ORTHO05D004878 1.9e-68 263.5 176 70.5
Manes.01G082700 Manihot esculenta HOM05D004152 ORTHO05D004878 2.4e-68 263.1 174 71.8
QL12p011587 Quercus lobata HOM05D004152 ORTHO05D004878 2.4e-68 263.1 174 71.8
BolC3t15222H Brassica oleracea HOM05D004152 ORTHO05D004878 3.2e-68 262.7 183 67.8
ECA240G2077 Erigeron canadensis HOM05D004152 ORTHO05D004878 3.2e-68 262.7 189 67.7
MD04G1062100 Malus domestica HOM05D004152 ORTHO05D004878 3.2e-68 262.7 174 70.7
Ca_20428_v3 Cicer arietinum L. HOM05D004152 ORTHO05D004878 4.1e-68 262.3 174 70.7
Thhalv10017142m.g Eutrema salsugineum HOM05D004152 ORTHO05D004878 4.1e-68 262.3 183 67.8
AUR62007107 Chenopodium quinoa HOM05D004152 ORTHO05D004878 7.1e-68 261.5 176 69.9
Cre06.g252650 Chlamydomonas reinhardtii HOM05D004152 ORTHO05D004878 9.2e-68 261.2 178 71.9
Zm00001eb249330 Zea mays HOM05D004152 ORTHO05D004878 1.2e-67 260.8 182 69.8
FvH4_5g19250 Fragaria vesca HOM05D004152 ORTHO05D004878 2.1e-67 260.0 174 71.3
Sp4g25220 Schrenkiella parvula HOM05D004152 ORTHO05D004878 2.1e-67 260.0 183 66.7
Solyc06g060790.1 Solanum lycopersicum HOM05D004152 ORTHO05D004878 3.5e-67 259.2 192 64.1
CSS0047405 Camellia sinensis var. sinensis HOM05D004152 ORTHO05D004878 4.6e-67 258.8 178 68.5
THA.LOC104803472 Tarenaya hassleriana HOM05D004152 ORTHO05D004878 6.0e-67 258.5 185 68.6
BraA05t19344Z Brassica rapa HOM05D004152 ORTHO05D004878 7.8e-67 258.1 183 66.7
FAN18G1702 Fragaria x ananassa HOM05D004152 ORTHO05D004878 7.8e-67 258.1 174 70.7
Lj2C222T2 Lonicera japonica HOM05D004152 ORTHO05D004878 7.8e-67 258.1 178 68.0
MD06G1055800 Malus domestica HOM05D004152 ORTHO05D004878 7.8e-67 258.1 174 69.5
Sc10g0005540 Simmondsia chinensis HOM05D004152 ORTHO05D004878 7.8e-67 258.1 218 60.6
Ah.12g054170 Amaranthus hybridus HOM05D004152 ORTHO05D004878 1.0e-66 257.7 178 68.0
PGSC0003DMG400024154 Solanum tuberosum HOM05D004152 ORTHO05D004878 1.0e-66 257.7 192 64.1
FAN08G2273 Fragaria x ananassa HOM05D004152 ORTHO05D004878 1.3e-66 257.3 179 68.2
Sopen06g020930 Solanum pennellii HOM05D004152 ORTHO05D004878 1.3e-66 257.3 192 63.5
BcaC02g12415 Brassica carinata HOM05D004152 ORTHO05D004878 1.7e-66 256.9 183 65.6
BolC4t22054H Brassica oleracea HOM05D004152 ORTHO05D004878 1.7e-66 256.9 183 65.6
PSO210G4930 Papaver somniferum HOM05D004152 ORTHO05D004878 1.7e-66 256.9 179 67.6
TAR629G1833 Trochodendron aralioides HOM05D004152 ORTHO05D004878 1.7e-66 256.9 177 68.4
Nitab4.5_0000618g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 2.3e-66 256.5 176 69.9
Nitab4.5_0002881g0050 Nicotiana tabacum HOM05D004152 ORTHO05D004878 2.3e-66 256.5 176 69.9
PSO210G0624 Papaver somniferum HOM05D004152 ORTHO05D004878 2.3e-66 256.5 179 67.6
Oeu040710.1 Olea europaea HOM05D004152 ORTHO05D004878 3.0e-66 256.1 221 59.7
Nn6g33894 Nelumbo nucifera HOM05D004152 ORTHO05D004878 3.9e-66 255.8 176 68.2
FAN04G2897 Fragaria x ananassa HOM05D004152 ORTHO05D004878 6.6e-66 255.0 174 69.5
FAN13G0727 Fragaria x ananassa HOM05D004152 ORTHO05D004878 1.1e-65 254.2 174 69.5
BcaNung03538 Brassica carinata HOM05D004152 ORTHO05D004878 1.5e-65 253.8 184 65.8
CARHR169410 Cardamine hirsuta HOM05D004152 ORTHO05D004878 1.5e-65 253.8 181 66.9
DCAR_002274 Daucus carota HOM05D004152 ORTHO05D004878 2.5e-65 253.1 179 65.4
DCAR_008502 Daucus carota HOM05D004152 ORTHO05D004878 2.5e-65 253.1 179 65.9
ATR0693G400 Amborella trichopoda HOM05D004152 ORTHO05D004878 7.3e-65 251.5 185 65.4
Prupe.5G066300 Prunus persica HOM05D004152 ORTHO05D004878 3.6e-64 249.2 174 68.4
Rhsim07G0110300 Rhododendron simsii HOM05D004152 ORTHO05D004878 4.7e-64 248.8 179 68.2
Aa31LG10G13480 Aethionema arabicum HOM05D004152 ORTHO05D004878 8.1e-64 248.1 189 64.6
CAN.G62.23 Capsicum annuum HOM05D004152 ORTHO05D004878 2.4e-63 246.5 185 64.3
Aa31LG1G24900 Aethionema arabicum HOM05D004152 ORTHO05D004878 3.1e-63 246.1 168 69.0
CARHR169370 Cardamine hirsuta HOM05D004152 ORTHO05D004878 6.8e-63 245.0 203 59.6
BcaB01g01073 Brassica carinata HOM05D004152 ORTHO05D004878 2.0e-62 243.4 183 62.3
Hund14573 Selenicereus undatus HOM05D004152 ORTHO05D004878 2.0e-62 243.4 172 66.9
AL5G40810 Arabidopsis lyrata HOM05D004152 ORTHO05D004878 9.9e-62 241.1 197 61.9
Carub.0005s2573 Capsella rubella HOM05D004152 ORTHO05D004878 9.9e-62 241.1 181 64.6
AT3G58990 Arabidopsis thaliana HOM05D004152 ORTHO05D004878 1.3e-61 240.7 195 62.6
Carub.0002s0595 Capsella rubella HOM05D004152 ORTHO05D004878 3.8e-61 239.2 181 64.6
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 4.9e-61 238.8 178 64.6
Peaxi162Scf01022g00023 Petunia axillaris HOM05D004152 ORTHO05D004878 4.9e-61 238.8 162 71.0
Lj8A264G55 Lonicera japonica HOM05D004152 ORTHO05D004878 1.1e-60 237.7 171 67.8
CDE11G0751 Ceratophyllum demersum HOM05D004152 ORTHO05D004878 1.3e-58 230.7 167 67.1
Actinidia10839 Actinidia chinensis HOM05D004152 ORTHO05D004878 1.7e-58 230.3 156 70.5
Lsat_1_v5_gn_6_92521 Lactuca sativa HOM05D004152 ORTHO05D004878 5.1e-58 228.8 261 51.7
Sp4g25230 Schrenkiella parvula HOM05D004152 ORTHO05D004878 4.3e-57 225.7 191 58.6
BcaC01g05264 Brassica carinata HOM05D004152 ORTHO05D004878 2.8e-56 223.0 180 63.3
CARHR138170 Cardamine hirsuta HOM05D004152 ORTHO05D004878 3.6e-56 222.6 192 58.3
A05p03590 Brassica napus HOM05D004152 ORTHO05D004878 1.8e-55 220.3 178 60.1
BraA05t19345Z Brassica rapa HOM05D004152 ORTHO05D004878 1.8e-55 220.3 178 60.1
BcaC02g12414 Brassica carinata HOM05D004152 ORTHO05D004878 5.2e-55 218.8 178 60.7
C04p04150 Brassica napus HOM05D004152 ORTHO05D004878 6.9e-55 218.4 178 60.1
BolC4t22055H Brassica oleracea HOM05D004152 ORTHO05D004878 6.9e-55 218.4 178 60.1
AT2G43100 Arabidopsis thaliana HOM05D004152 ORTHO05D004878 9.0e-55 218.0 213 54.5
Thhalv10017125m.g Eutrema salsugineum HOM05D004152 ORTHO05D004878 1.5e-54 217.2 202 55.0
AL4G41750 Arabidopsis lyrata HOM05D004152 ORTHO05D004878 2.0e-54 216.9 196 56.1
BcaNung03539 Brassica carinata HOM05D004152 ORTHO05D004878 4.4e-54 215.7 178 60.1
Aa31LG1G24910 Aethionema arabicum HOM05D004152 ORTHO05D004878 9.9e-54 214.5 178 59.0
Carub.0004s2558 Capsella rubella HOM05D004152 ORTHO05D004878 6.4e-53 211.8 194 55.2
CDE11G0227 Ceratophyllum demersum HOM05D004152 ORTHO05D004878 1.5e-49 200.7 150 66.0
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 7.3e-49 198.4 157 59.9
Cc08_g12220 Coffea canephora HOM05D004152 ORTHO05D004878 6.2e-48 195.3 120 75.0
Gohir.A03G168700 Gossypium hirsutum HOM05D004152 ORTHO05D004878 6.2e-48 195.3 182 55.5
Dinv39162 Davidia involucrata HOM05D004152 ORTHO05D004878 1.1e-47 194.5 149 61.7
HPP92_020921 Vanilla planifolia HOM05D004152 ORTHO05D004878 2.0e-46 190.3 161 59.6
SalBow1G7183 Salvia bowleyana HOM05D004152 ORTHO05D004878 4.5e-46 189.1 128 71.1
SHI09309 Sapria himalayana HOM05D004152 ORTHO05D004878 8.7e-42 174.9 127 63.0
Actinidia31515 Actinidia chinensis HOM05D004152 ORTHO05D004878 3.3e-41 172.9 109 77.1
EL10Ac5g12363 Beta vulgaris HOM05D004152 ORTHO05D004878 3.3e-41 172.9 150 54.7
Dinv21650 Davidia involucrata HOM05D004152 ORTHO05D004878 1.1e-39 167.9 116 69.0
Carub.0005s2576 Capsella rubella HOM05D004152 ORTHO05D004878 2.4e-39 166.8 161 55.9
Nitab4.5_0002372g0010 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.7e-37 160.6 118 66.9
Lj8A267T12 Lonicera japonica HOM05D004152 ORTHO05D004878 1.4e-36 157.5 177 49.2
TPR.G10893 Trifolium pratense HOM05D004152 ORTHO05D004878 1.4e-36 157.5 123 63.4
Sed0021243 Sechium edule HOM05D004152 ORTHO05D004878 2.3e-34 150.2 99 71.7
Lj8A266T18 Lonicera japonica HOM05D004152 ORTHO05D004878 7.4e-33 145.2 177 47.5
Rhsim05G0121600 Rhododendron simsii HOM05D004152 ORTHO05D004878 7.4e-33 145.2 116 63.8
Ah.12g054180 Amaranthus hybridus HOM05D004152 ORTHO05D004878 1.1e-31 141.4 152 46.1
Oeu047732.1 Olea europaea HOM05D004152 ORTHO05D004878 1.8e-31 140.6 177 46.3
BcaB05g25308 Brassica carinata HOM05D004152 ORTHO05D004878 2.5e-25 120.2 174 42.5
SalBow1G0783 Salvia bowleyana HOM05D001430 ORTHO05D004878 7.4e-25 118.6 107 56.1
Lsat_1_v5_gn_7_1160 Lactuca sativa HOM05D004152 ORTHO05D004878 1.9e-20 104.0 74 62.2
AUR62007106 Chenopodium quinoa HOM05D004152 ORTHO05D004878 3.6e-19 99.8 104 49.0
C04p04140 Brassica napus HOM05D000373 ORTHO05D007048 4.6e-19 99.4 94 51.1
A05p03570 Brassica napus HOM05D000373 ORTHO05D007048 7.9e-19 98.6 94 51.1
ATR0693G063 Amborella trichopoda HOM05D004152 ORTHO05D004878 3.0e-18 96.7 123 45.5
Lsat_1_v5_gn_5_55401 Lactuca sativa HOM05D004152 ORTHO05D004878 1.5e-17 94.4 77 58.4
Rhsim03G0103100 Rhododendron simsii HOM05D004152 ORTHO05D004878 3.7e-16 89.7 85 55.3
Cfa024802 Carpinus fangiana HOM05D003112 ORTHO05D003660 5.1e-10 69.3 119 41.2
Ah.14g083550 Amaranthus hybridus HOM05D004152 ORTHO05D004878 1.1e-09 68.2 51 56.9
MCO01G562 Micromonas commoda HOM05D003112 ORTHO05D003660 2.0e-09 67.4 123 35.8
PRCOL_00005264 Prasinoderma coloniale HOM05D003112 ORTHO05D003660 9.7e-09 65.1 144 29.9
Cfa023744 Carpinus fangiana HOM05D003112 ORTHO05D003660 2.8e-08 63.5 139 31.7
GSVIVG01007403001 Vitis vinifera HOM05D004152 ORTHO05D004878 4.8e-08 62.8 135 34.1
CsaV3_5G004360 Cucumis sativus L. HOM05D004152 ORTHO05D004878 6.3e-08 62.4 43 69.8
Ca_28701_v3 Cicer arietinum L. HOM05D004152 ORTHO05D003660 7.7e-06 55.5 107 36.4


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