Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G027580 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.0e-62 242.3 121 100.0
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.6e-56 222.6 111 100.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 6.1e-48 194.1 111 86.5
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 6.1e-48 194.1 111 83.8
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.5e-46 189.5 108 86.1
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.5e-46 189.5 108 86.1
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 3.4e-46 188.3 111 80.2
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-45 184.9 111 81.1
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-45 184.9 111 81.1
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-45 184.9 111 81.1
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-45 184.9 111 81.1
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.7e-45 184.9 111 81.1
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 2.4e-44 182.2 106 84.0
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 5.4e-44 181.0 111 79.3
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.2e-43 179.9 111 77.5
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 8.5e-42 173.7 106 73.6
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 8.5e-42 173.7 106 73.6
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.1e-41 173.3 111 77.5
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 2.5e-41 172.2 111 80.2
Lj2C1237G1 Lonicera japonica HOM05D000216 ORTHO05D000634 9.5e-41 170.2 111 78.4
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 9.5e-41 170.2 111 78.4
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 9.5e-41 170.2 111 78.4
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.2e-40 169.9 107 74.8
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.6e-40 169.5 106 76.4
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.8e-40 168.7 109 74.3
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 2.8e-40 168.7 109 74.3
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.8e-40 168.7 108 76.9
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 4.7e-40 167.9 109 72.5
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.4e-39 166.4 109 73.4
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.4e-39 166.4 109 73.4
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 6.8e-39 164.1 115 70.4
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.2e-38 163.3 97 82.5
Phvul.003G256666 Phaseolus vulgaris HOM05D000216 ORTHO05D000634 2.0e-38 162.5 114 71.9
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 3.4e-38 161.8 108 70.4
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 5.7e-38 161.0 108 75.9
GSVIVG01034287001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.7e-37 159.5 95 82.1
Gorai.008G142400 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.2e-37 159.1 96 78.1
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 6.3e-37 157.5 110 70.0
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.8e-36 156.0 111 73.9
Gohir.D12G131101 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.1e-36 154.8 95 76.8
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 4.5e-35 151.4 108 72.2
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 4.5e-35 151.4 108 72.2
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 4.5e-35 151.4 108 72.2
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 4.5e-35 151.4 108 72.2
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 2.9e-34 148.7 95 77.9
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 4.3e-33 144.8 104 69.2
Gohir.A09G101340 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.2e-31 137.9 82 78.0
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-30 136.3 111 67.6
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.9e-29 132.1 118 61.9
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.0e-27 125.9 93 66.7
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.7e-27 125.6 111 63.1
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 3.6e-24 115.2 70 77.1
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 2.3e-23 112.5 56 98.2
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.2e-22 110.2 74 68.9
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-20 102.4 101 59.4
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-20 102.4 91 62.6
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-20 102.4 91 62.6
HanXRQChr14g0455011 Helianthus annuus HOM05D000216 ORTHO05D000634 3.0e-18 95.5 75 64.0
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 3.0e-18 95.5 62 74.2
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 4.3e-17 91.7 58 72.4
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 4.3e-17 91.7 58 72.4
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 1.2e-16 90.1 63 63.5
Nn4g23967 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.2e-16 90.1 51 84.3
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 1.2e-16 90.1 65 67.7
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.8e-16 89.0 60 71.7
Zm00001eb418100 Zea mays HOM05D000216 ORTHO05D000634 2.8e-16 89.0 65 67.7
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 2.8e-16 89.0 65 67.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 4.7e-16 88.2 64 67.2
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 1.1e-15 87.0 51 76.5
TPR.G11287 Trifolium pratense HOM05D000216 ORTHO05D000634 3.1e-15 85.5 53 69.8
Solyc01g017510.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.8e-15 84.3 67 61.2
ClCG01G011270 Citrullus lanatus HOM05D000216 ORTHO05D000634 8.9e-15 84.0 69 62.3
Hund10655 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-14 83.6 80 58.8
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.6e-14 82.4 58 69.0
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.6e-14 82.4 58 69.0
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-13 78.6 56 71.4
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.7e-13 78.6 56 71.4
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 6.4e-13 77.8 48 77.1
Solyc06g074600.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.4e-13 77.8 43 88.4
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.4e-12 75.9 43 86.0
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.0e-11 71.2 55 61.8
Nitab4.5_0000502g0040 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.3e-10 69.3 56 55.4
Migut.J01368 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.3e-09 65.1 50 62.0
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.8e-08 62.4 37 78.4


User provided reference genes

Program Settings