Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G075400 Populus trichocarpa HOM05D004647 ORTHO05D005349 1.1e-69 266.5 135 100.0
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 8.1e-25 117.5 71 84.5
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 3.1e-24 115.5 71 83.1
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 3.1e-24 115.5 71 83.1
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 4.0e-24 115.2 72 81.9
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 9.0e-24 114.0 72 81.9
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 9.0e-24 114.0 72 81.9
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 9.0e-24 114.0 72 79.2
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 1.2e-23 113.6 72 77.8
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 1.2e-23 113.6 72 79.2
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 1.5e-23 113.2 72 77.8
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 2.0e-23 112.8 72 80.6
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 3.4e-23 112.1 78 73.1
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 3.4e-23 112.1 72 77.8
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 4.5e-23 111.7 72 76.4
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 4.5e-23 111.7 72 76.4
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 4.5e-23 111.7 72 77.8
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 4.5e-23 111.7 72 77.8
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 5.8e-23 111.3 72 76.4
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 7.6e-23 110.9 72 76.4
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 9.9e-23 110.5 72 76.4
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 1.3e-22 110.2 72 77.8
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 1.3e-22 110.2 72 76.4
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 1.7e-22 109.8 72 75.0
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 1.7e-22 109.8 72 73.6
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 1.7e-22 109.8 72 73.6
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 1.7e-22 109.8 72 77.8
VMungo1215G3307 Vigna mungo HOM05D004647 ORTHO05D005349 1.7e-22 109.8 70 80.0
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 2.2e-22 109.4 72 76.4
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 2.2e-22 109.4 71 74.6
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 2.9e-22 109.0 71 76.1
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 2.9e-22 109.0 72 75.0
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 3.8e-22 108.6 72 75.0
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 3.8e-22 108.6 71 74.6
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 3.8e-22 108.6 72 75.0
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 4.9e-22 108.2 72 75.0
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 8.4e-22 107.5 70 78.6
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 1.1e-21 107.1 72 75.0
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 1.1e-21 107.1 70 77.1
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 1.4e-21 106.7 72 75.0
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 1.9e-21 106.3 70 72.9
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 1.9e-21 106.3 70 77.1
QL02p101061 Quercus lobata HOM05D004647 ORTHO05D005349 1.9e-21 106.3 72 75.0
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 1.9e-21 106.3 70 77.1
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 2.4e-21 105.9 70 77.1
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 2.4e-21 105.9 72 73.6
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 3.2e-21 105.5 72 75.0
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 3.2e-21 105.5 71 69.0
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 4.2e-21 105.1 70 75.7
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 4.2e-21 105.1 70 75.7
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 4.2e-21 105.1 71 70.4
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 4.2e-21 105.1 72 73.6
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 4.2e-21 105.1 71 73.2
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 5.4e-21 104.8 70 74.3
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.4e-21 104.8 70 75.7
THA.LOC104815465 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.4e-21 104.8 70 75.7
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 5.4e-21 104.8 70 75.7
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 5.4e-21 104.8 71 73.2
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 7.1e-21 104.4 70 74.3
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 7.1e-21 104.4 72 69.4
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 7.1e-21 104.4 72 72.2
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 7.1e-21 104.4 70 75.7
SEGI_00924 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 7.1e-21 104.4 72 72.2
SEGI_17588 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 7.1e-21 104.4 72 72.2
SEGI_39775 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 7.1e-21 104.4 72 72.2
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 9.3e-21 104.0 72 72.2
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 1.2e-20 103.6 70 74.3
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 1.2e-20 103.6 70 74.3
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 1.2e-20 103.6 70 74.3
Medtr5g009430 Medicago truncatula HOM05D004647 ORTHO05D005349 1.6e-20 103.2 72 70.8
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 1.6e-20 103.2 70 75.7
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 1.6e-20 103.2 72 75.0
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 2.1e-20 102.8 70 74.3
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 2.7e-20 102.4 72 65.3
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 2.7e-20 102.4 70 71.4
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 2.7e-20 102.4 72 69.4
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 2.7e-20 102.4 70 74.3
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 2.7e-20 102.4 70 74.3
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 2.7e-20 102.4 71 71.8
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 2.7e-20 102.4 71 67.6
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 3.5e-20 102.1 72 68.1
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 3.5e-20 102.1 70 74.3
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 4.6e-20 101.7 68 75.0
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 4.6e-20 101.7 71 67.6
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 6.0e-20 101.3 72 68.1
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 7.9e-20 100.9 70 71.4
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 7.9e-20 100.9 70 71.4
QL02p101105 Quercus lobata HOM05D004647 ORTHO05D005349 7.9e-20 100.9 71 71.8
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 7.9e-20 100.9 72 68.1
CSS0025503 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.0e-19 100.5 72 70.8
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.0e-19 100.5 72 68.1
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 1.0e-19 100.5 72 68.1
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 1.0e-19 100.5 72 69.4
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 2.3e-19 99.4 71 66.2
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 2.3e-19 99.4 72 66.7
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 2.3e-19 99.4 72 66.7
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 3.0e-19 99.0 67 74.6
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 3.0e-19 99.0 71 66.2
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 3.9e-19 98.6 72 66.7
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 8.7e-19 97.4 72 65.3
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 1.5e-18 96.7 72 65.3
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 3.3e-18 95.5 72 72.2
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 3.3e-18 95.5 71 66.2
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 1.3e-17 93.6 70 68.6
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 2.1e-17 92.8 66 68.2
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 4.8e-17 91.7 72 70.8
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 1.8e-16 89.7 70 61.4
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 6.9e-16 87.8 70 64.3
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.9e-16 87.8 70 64.3
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.9e-16 87.8 70 64.3
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.9e-16 87.8 70 64.3
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.9e-16 87.8 70 64.3
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 9.0e-16 87.4 70 62.9
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 9.0e-16 87.4 68 72.1
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 1.2e-15 87.0 72 68.1
Ca_22423_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 4.5e-15 85.1 86 57.0
CBR_g61059 Chara braunii HOM05D004647 ORTHO05D005349 6.4e-14 81.3 78 52.6
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 6.4e-14 81.3 70 64.3
Ca_07701_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 3.2e-13 79.0 82 56.1
Cre07.g319900 Chlamydomonas reinhardtii HOM05D004647 ORTHO05D005349 4.6e-12 75.1 77 48.1
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 8.7e-11 70.9 69 49.3
Glyma.19G045000 Glycine max HOM05D004647 ORTHO05D005349 1.1e-10 70.5 72 52.8
PGSC0003DMG400042364 Solanum tuberosum HOM05D004647 ORTHO05D005349 4.3e-10 68.6 51 58.8
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 2.1e-09 66.2 43 72.1
CAN.G110.1 Capsicum annuum HOM05D004647 ORTHO05D005349 1.1e-08 63.9 69 47.8
CSS0039197 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 1.8e-08 63.2 42 73.8
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 1.8e-08 63.2 39 74.4
Sed0007118 Sechium edule HOM05D004647 ORTHO05D005349 2.4e-08 62.8 53 62.3
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 3.1e-08 62.4 33 84.8
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 2.0e-07 59.7 45 57.8


User provided reference genes

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