Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G213950 Populus trichocarpa HOM05D000283 ORTHO05D004861 1.6e-48 195.7 92 100.0
TAR623G1321 Trochodendron aralioides HOM05D000283 ORTHO05D004861 1.8e-28 129.0 64 90.6
Sabra10G0165600 Salix brachista HOM05D000283 ORTHO05D004861 3.1e-28 128.3 64 92.2
Nn2g12826 Nelumbo nucifera HOM05D000283 ORTHO05D004861 1.6e-27 125.9 64 89.1
Aqoxy4G03100 Aquilegia oxysepala HOM05D000283 ORTHO05D004861 2.7e-27 125.2 64 87.5
Cc02_g08700 Coffea canephora HOM05D000283 ORTHO05D004861 2.7e-27 125.2 64 84.4
PSO384G1824 Papaver somniferum HOM05D000283 ORTHO05D004861 2.7e-27 125.2 64 87.5
PSO699G0010 Papaver somniferum HOM05D000283 ORTHO05D004861 2.7e-27 125.2 64 87.5
Potri.008G047300 Populus trichocarpa HOM05D000283 ORTHO05D004861 2.7e-27 125.2 64 87.5
PGR044G2742 Punica granatum HOM05D000283 ORTHO05D004861 3.5e-27 124.8 64 85.9
CAN.G786.36 Capsicum annuum HOM05D000283 ORTHO05D004861 5.9e-27 124.0 64 84.4
Peaxi162Scf00135g00213 Petunia axillaris HOM05D000283 ORTHO05D004861 5.9e-27 124.0 64 85.9
Solyc04g010120.3 Solanum lycopersicum HOM05D000283 ORTHO05D004861 5.9e-27 124.0 64 84.4
Sopen04g005260 Solanum pennellii HOM05D000283 ORTHO05D004861 5.9e-27 124.0 64 84.4
Actinidia13845 Actinidia chinensis HOM05D000283 ORTHO05D004861 7.7e-27 123.6 64 84.4
Ciclev10031660m.g Citrus clementina HOM05D000283 ORTHO05D004861 7.7e-27 123.6 64 85.9
CSS0006131 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.0e-26 123.2 64 82.8
CSS0019692 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.0e-26 123.2 64 82.8
Nitab4.5_0007221g0020 Nicotiana tabacum HOM05D000283 ORTHO05D004861 1.0e-26 123.2 64 82.8
Cfa001563 Carpinus fangiana HOM05D000283 ORTHO05D004861 1.3e-26 122.9 64 85.9
Sabra08G0033500 Salix brachista HOM05D000283 ORTHO05D004861 1.3e-26 122.9 64 87.5
EL10Ac2g03514 Beta vulgaris HOM05D000283 ORTHO05D004861 1.7e-26 122.5 64 82.8
Atru.BG.269.p Acer truncatum HOM05D000283 ORTHO05D004861 2.2e-26 122.1 63 84.1
MBI05_g05301_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D004861 2.2e-26 122.1 64 82.8
MD01G1115600 Malus domestica HOM05D000283 ORTHO05D004861 2.2e-26 122.1 68 79.4
Duzib114G0902 Durio zibethinus HOM05D000283 ORTHO05D004861 2.9e-26 121.7 64 84.4
MD01G1115200 Malus domestica HOM05D000283 ORTHO05D004861 2.9e-26 121.7 64 82.8
Prupe.2G222200 Prunus persica HOM05D000283 ORTHO05D004861 2.9e-26 121.7 64 82.8
SGA_v2.0_scaffold426G51499 Striga asiatica HOM05D000283 ORTHO05D004861 2.9e-26 121.7 64 82.8
CiPaw.01G279200 Carya illinoinensis HOM05D000283 ORTHO05D004861 3.8e-26 121.3 64 84.4
Oeu050636.1 Olea europaea HOM05D000283 ORTHO05D004861 3.8e-26 121.3 64 79.7
AUR62025543 Chenopodium quinoa HOM05D000283 ORTHO05D004861 5.0e-26 120.9 68 77.9
AUR62043534 Chenopodium quinoa HOM05D000283 ORTHO05D004861 5.0e-26 120.9 68 77.9
AUR62043801 Chenopodium quinoa HOM05D000283 ORTHO05D004861 5.0e-26 120.9 68 77.9
Hund22437 Selenicereus undatus HOM05D000283 ORTHO05D004861 5.0e-26 120.9 64 81.2
COL.COLO4_05799 Corchorus olitorius HOM05D000283 ORTHO05D004861 6.5e-26 120.6 64 82.8
Eucgr.J01144 Eucalyptus grandis HOM05D000283 ORTHO05D004861 6.5e-26 120.6 68 79.4
Gohir.D10G217000 Gossypium hirsutum HOM05D000283 ORTHO05D004861 6.5e-26 120.6 64 82.8
AT3G55070 Arabidopsis thaliana HOM05D000283 ORTHO05D004861 8.5e-26 120.2 64 82.8
Manes.10G039500 Manihot esculenta HOM05D000283 ORTHO05D004861 8.5e-26 120.2 64 82.8
Duzib106G0238 Durio zibethinus HOM05D000283 ORTHO05D004861 1.1e-25 119.8 64 82.8
CsaV3_5G006500 Cucumis sativus L. HOM05D000283 ORTHO05D004861 1.5e-25 119.4 64 84.4
FvH4_7g20680 Fragaria vesca HOM05D000283 ORTHO05D004861 1.5e-25 119.4 64 82.8
FAN06G3181 Fragaria x ananassa HOM05D000283 ORTHO05D004861 1.5e-25 119.4 64 82.8
FAN06G3682 Fragaria x ananassa HOM05D000283 ORTHO05D004861 1.5e-25 119.4 64 82.8
FAN10G1136 Fragaria x ananassa HOM05D000283 ORTHO05D004861 1.5e-25 119.4 64 82.8
QL08p057473 Quercus lobata HOM05D000283 ORTHO05D004861 1.5e-25 119.4 63 79.4
Thecc.10G063500 Theobroma cacao HOM05D000283 ORTHO05D004861 1.5e-25 119.4 64 82.8
Gohir.A10G208700 Gossypium hirsutum HOM05D000283 ORTHO05D004861 1.9e-25 119.0 64 81.2
Actinidia38228 Actinidia chinensis HOM05D000283 ORTHO05D004861 2.5e-25 118.6 64 82.8
Haze_16966 Corylus avellana HOM05D000283 ORTHO05D004861 2.5e-25 118.6 64 82.8
ECA232G1460 Erigeron canadensis HOM05D000283 ORTHO05D004861 2.5e-25 118.6 64 81.2
Gohir.A05G343200 Gossypium hirsutum HOM05D000283 ORTHO05D004861 2.5e-25 118.6 64 81.2
Gohir.D04G081100 Gossypium hirsutum HOM05D000283 ORTHO05D004861 2.5e-25 118.6 64 81.2
Gorai.012G092000 Gossypium raimondii HOM05D000283 ORTHO05D004861 2.5e-25 118.6 64 81.2
HanXRQChr09g0246601 Helianthus annuus HOM05D000283 ORTHO05D004861 2.5e-25 118.6 64 81.2
Aa31LG10G10070 Aethionema arabicum HOM05D000283 ORTHO05D004861 3.2e-25 118.2 64 81.2
ClCG02G013690 Citrullus lanatus HOM05D000283 ORTHO05D004861 3.2e-25 118.2 64 82.8
Glyma.20G242800 Glycine max HOM05D000283 ORTHO05D004861 3.2e-25 118.2 64 81.2
MBI02_g23397_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D004861 3.2e-25 118.2 64 82.8
Medtr1g116055 Medicago truncatula HOM05D000283 ORTHO05D004861 3.2e-25 118.2 64 81.2
Os05g0160100 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D004861 3.2e-25 118.2 64 81.2
AL5G36190 Arabidopsis lyrata HOM05D000283 ORTHO05D004861 4.2e-25 117.9 64 81.2
Ca_11339_v3 Cicer arietinum L. HOM05D000283 ORTHO05D004861 4.2e-25 117.9 64 81.2
FAN01G0258 Fragaria x ananassa HOM05D000283 ORTHO05D004861 4.2e-25 117.9 64 81.2
FAN01G0780 Fragaria x ananassa HOM05D000283 ORTHO05D004861 4.2e-25 117.9 64 81.2
Hma1.2p1_0348F.1_g131730 Hydrangea macrophylla HOM05D000283 ORTHO05D004861 4.2e-25 117.9 64 79.7
Lalb_Chr21g0307121 Lupinus albus HOM05D000283 ORTHO05D004861 4.2e-25 117.9 64 78.1
MD07G1183500 Malus domestica HOM05D000283 ORTHO05D004861 4.2e-25 117.9 64 78.1
SalBow6G5798 Salvia bowleyana HOM05D000283 ORTHO05D004861 4.2e-25 117.9 64 79.7
CDE11G0382 Ceratophyllum demersum HOM05D000283 ORTHO05D004861 5.5e-25 117.5 68 76.5
Rhsim09G0155700 Rhododendron simsii HOM05D000283 ORTHO05D004861 5.5e-25 117.5 64 81.2
CANSAT56G1270 Cannabis sativa HOM05D000283 ORTHO05D004861 7.2e-25 117.1 64 78.1
CiPaw.02G178300 Carya illinoinensis HOM05D000283 ORTHO05D004861 7.2e-25 117.1 64 81.2
MELO3C011710.2 Cucumis melo HOM05D000283 ORTHO05D004861 7.2e-25 117.1 64 81.2
Glyma.10G292551 Glycine max HOM05D000283 ORTHO05D004861 7.2e-25 117.1 64 81.2
Dinv31387 Davidia involucrata HOM05D000283 ORTHO05D004861 9.4e-25 116.7 64 81.2
GSVIVG01032634001 Vitis vinifera HOM05D000283 ORTHO05D004861 1.2e-24 116.3 64 79.7
A09p48090 Brassica napus HOM05D000283 ORTHO05D004861 1.6e-24 115.9 68 76.5
C08p30310 Brassica napus HOM05D000283 ORTHO05D004861 1.6e-24 115.9 68 76.5
BraA09t40263Z Brassica rapa HOM05D000283 ORTHO05D004861 1.6e-24 115.9 68 76.5
Ah.16g108160 Amaranthus hybridus HOM05D000283 ORTHO05D004861 2.1e-24 115.5 68 73.5
arahy.Tifrunner.gnm1.ann1.5B7TYX Arachis hypogaea HOM05D000283 ORTHO05D004861 2.1e-24 115.5 64 81.2
BcaC07g39830 Brassica carinata HOM05D000283 ORTHO05D004861 2.1e-24 115.5 68 76.5
BolC8t50654H Brassica oleracea HOM05D000283 ORTHO05D004861 2.1e-24 115.5 68 76.5
Sp5g07350 Schrenkiella parvula HOM05D000283 ORTHO05D004861 2.1e-24 115.5 64 79.7
THA.LOC104809995 Tarenaya hassleriana HOM05D000283 ORTHO05D004861 2.1e-24 115.5 64 78.1
THA.LOC104810168 Tarenaya hassleriana HOM05D000283 ORTHO05D004861 2.1e-24 115.5 64 78.1
Hma1.2p1_0207F.1_g087990 Hydrangea macrophylla HOM05D000283 ORTHO05D004861 2.7e-24 115.2 64 78.1
Lj8A93G63 Lonicera japonica HOM05D000283 ORTHO05D004861 2.7e-24 115.2 64 79.7
TWI63G0514 Tripterygium wilfordii HOM05D000283 ORTHO05D004861 2.7e-24 115.2 64 78.1
HPP92_016703 Vanilla planifolia HOM05D000283 ORTHO05D004861 2.7e-24 115.2 64 76.6
CARHR165090 Cardamine hirsuta HOM05D000283 ORTHO05D004861 3.6e-24 114.8 64 79.7
TPR.G40391 Trifolium pratense HOM05D000283 ORTHO05D004861 3.6e-24 114.8 64 76.6
arahy.Tifrunner.gnm1.ann1.M3B011 Arachis hypogaea HOM05D000283 ORTHO05D004861 4.7e-24 114.4 64 79.7
Lalb_Chr02g0143841 Lupinus albus HOM05D000283 ORTHO05D004861 4.7e-24 114.4 64 78.1
Carub.0005s2170 Capsella rubella HOM05D000283 ORTHO05D004861 6.1e-24 114.0 64 76.6
DCAR_019154 Daucus carota HOM05D000283 ORTHO05D004861 6.1e-24 114.0 64 76.6
BcaB01g00131 Brassica carinata HOM05D000283 ORTHO05D004861 8.0e-24 113.6 68 75.0
DCAR_019151 Daucus carota HOM05D000283 ORTHO05D004861 8.0e-24 113.6 63 76.2
RcHm_v2.0_Chr1g0364711 Rosa chinensis HOM05D000283 ORTHO05D004861 8.0e-24 113.6 64 79.7
SEGI_26055 Sequoiadendron giganteum HOM05D000283 ORTHO05D004861 8.0e-24 113.6 64 79.7
Sed0024713 Sechium edule HOM05D000283 ORTHO05D004861 1.0e-23 113.2 64 79.7
VMungo0720G1844 Vigna mungo HOM05D000283 ORTHO05D004861 1.0e-23 113.2 64 78.1
MSTRG.8232 Avicennia marina HOM05D000283 ORTHO05D004861 1.4e-23 112.8 64 76.6
Lj5g0010112 Lotus japonicus HOM05D004526 ORTHO05D004861 1.8e-23 112.5 64 75.0
Migut.F01536 Erythranthe guttata HOM05D000283 ORTHO05D004861 2.3e-23 112.1 64 73.4
HanXRQChr15g0496791 Helianthus annuus HOM05D000283 ORTHO05D004861 2.3e-23 112.1 64 76.6
Nitab4.5_0006737g0080 Nicotiana tabacum HOM05D000283 ORTHO05D004861 2.3e-23 112.1 57 82.5
Phvul.007G007400 Phaseolus vulgaris HOM05D000283 ORTHO05D004861 2.3e-23 112.1 64 79.7
Sed0007781 Sechium edule HOM05D000283 ORTHO05D004861 2.3e-23 112.1 64 76.6
FAN03G0565 Fragaria x ananassa HOM05D000283 ORTHO05D004861 3.0e-23 111.7 73 72.6
BcaC02g09720 Brassica carinata HOM05D000283 ORTHO05D004861 4.0e-23 111.3 68 72.1
A04p04850 Brassica napus HOM05D000283 ORTHO05D004861 4.0e-23 111.3 68 72.1
C04p37350 Brassica napus HOM05D000283 ORTHO05D004861 4.0e-23 111.3 68 72.1
BolC4t25299H Brassica oleracea HOM05D000283 ORTHO05D004861 4.0e-23 111.3 68 72.1
BraA04t16198Z Brassica rapa HOM05D000283 ORTHO05D004861 4.0e-23 111.3 68 72.1
Thhalv10010415m.g Eutrema salsugineum HOM05D000283 ORTHO05D004861 4.0e-23 111.3 64 73.4
ATR0810G097 Amborella trichopoda HOM05D000283 ORTHO05D004861 8.8e-23 110.2 62 72.6
Pp3c24_18980 Physcomitrium patens HOM05D000283 ORTHO05D004861 5.7e-22 107.5 64 73.4
Ah.10g033170 Amaranthus hybridus HOM05D000283 ORTHO05D004861 9.8e-22 106.7 64 70.3
AagrBONN_evm.TU.Sc2ySwM_228.2194 Anthoceros agrestis HOM05D000283 ORTHO05D004861 9.8e-22 106.7 62 72.6
TAR633G2156 Trochodendron aralioides HOM05D000283 ORTHO05D004861 1.7e-21 105.9 64 71.9
Zm00001eb282460 Zea mays HOM05D000283 ORTHO05D004861 2.8e-21 105.1 64 73.4
Mapoly0093s0006 Marchantia polymorpha HOM05D000283 ORTHO05D004861 4.8e-21 104.4 68 67.6
Pp3c8_20500 Physcomitrium patens HOM05D000283 ORTHO05D004861 8.3e-21 103.6 64 71.9
BcaB02g07699 Brassica carinata HOM05D000283 ORTHO05D004861 2.4e-20 102.1 64 71.9
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 5.4e-20 100.9 63 73.0
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 9.1e-20 100.1 53 81.1
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 9.1e-20 100.1 53 81.1
SMO119G0426 Selaginella moellendorffii HOM05D000283 ORTHO05D004861 3.5e-19 98.2 64 70.3
Lsat_1_v5_gn_9_66761 Lactuca sativa HOM05D000283 ORTHO05D004861 1.0e-18 96.7 55 76.4
BcaC08g44723 Brassica carinata HOM05D000283 ORTHO05D004861 1.3e-18 96.3 62 69.4
Cpa.g.sc1.298 Carica papaya HOM05D000283 ORTHO05D004861 2.9e-18 95.1 54 79.6
SMO111G0010 Selaginella moellendorffii HOM05D000283 ORTHO05D004861 9.5e-17 90.1 69 55.1
C06p22610 Brassica napus HOM05D000283 ORTHO05D004861 8.3e-13 77.0 51 68.6
CAN.G786.34 Capsicum annuum HOM05D000283 ORTHO05D004861 2.7e-11 72.0 39 76.9
BolC6t37451H Brassica oleracea HOM05D000283 ORTHO05D004861 7.8e-11 70.5 56 55.4
RcHm_v2.0_Chr1g0364751 Rosa chinensis HOM05D000283 ORTHO05D004861 2.3e-10 68.9 92 43.5
PRCOL_00005225 Prasinoderma coloniale HOM05D000283 ORTHO05D004861 6.6e-10 67.4 66 48.5
Haze_27231 Corylus avellana HOM05D000283 ORTHO05D004861 2.1e-08 62.4 62 43.5
Gorai.011G242600 Gossypium raimondii HOM05D000283 ORTHO05D004861 2.8e-08 62.0 30 86.7
CBR_g863 Chara braunii HOM05D000283 ORTHO05D004861 9.8e-06 53.5 30 76.7


User provided reference genes

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