Gene: Lsat_1_v5_gn_9_66761

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_9_66761
  • Transcript Identifier Lsat_1_v5_gn_9_66761.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_9 : 85457817-85468123 : positive

Gene Family Information

  • ID HOM05D000283
  • #Genes/#Species 1540/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_9_66761.v5
  • pacid 38923968

Descriptions

  • Description PTHR12436//PTHR12436:SF20 - 80 KDA MCM3-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D000283
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G55070
GO:0046982
ISO
PLAZA Homology (enrichment)protein heterodimerization activity HOM05D000283

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G55070
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G55070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005062 SAC3/GANP/THP3, conserved domain
IPR013144 CRA domain
IPR045107 SAC3/GANP/THP3
IPR006595 CTLH, C-terminal LisH motif
IPR024964 CTLH/CRA C-terminal to LisH motif domain
Mapman id Description
16.10.2.1 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX-2 mRNP trafficking complex.scaffold component GANP/SAC3
19.2.1.3.1.9 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID9