Gene: CSS0032920
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0032920
- Transcript Identifier CSS0032920.1
- Gene Type Coding gene
- Location Chr1 : 24539278-24561339 : positive
Gene Family Information
- ID HOM05D000283
- #Genes/#Species 1540/100
- Phylogenetic origin
- ID ORTHO05D004861
- #Genes/#Species 169/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0032920.1
Descriptions
- Description unnamed protein product [Coffea canephora]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043161 | IEA | InterPro | proteasome-mediated ubiquitin-dependent protein catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D000283 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G55070 |
| GO:0046982 | ISO | PLAZA Homology (enrichment) | protein heterodimerization activity | HOM05D000283 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G55070 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G55070 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027714 | Protein Fyv10/E3 ubiquitin-protein transferase MAEA |
| IPR045098 | Fyv10 family |
| IPR006595 | CTLH, C-terminal LisH motif |
| IPR036464 | Rubisco LSMT, substrate-binding domain superfamily |
| IPR024964 | CTLH/CRA C-terminal to LisH motif domain |
| IPR015353 | Rubisco LSMT, substrate-binding domain |
| IPR013144 | CRA domain |
| Mapman id | Description |
|---|---|
| 19.2.1.3.1.9 | Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID9 |