Gene: Pp3c24_18980

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c24_18980
  • Transcript Identifier Pp3c24_18980V3.2
  • Gene Type Coding gene
  • Location Chr24 : 12741368-12744479 : positive

Gene Family Information

  • ID HOM05D000283
  • #Genes/#Species 1540/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c24_18980V3.2
  • pacid 32910865
  • alias Pp1s101_201V6
  • alias Phypa_106833
  • alias Phpat.024G068700
  • uniprot A9SPN7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IBA
IEA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043161
IEA
InterProproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
ISO
PLAZA Homology (enrichment)protein heterodimerization activity HOM05D000283
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G55070
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D000283
GO:0004842
IBA
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G55070
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0034657
IBA
GOA DatabaseGID complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027714 Protein Fyv10/E3 ubiquitin-protein transferase MAEA
IPR045098 Fyv10 family
IPR013144 CRA domain
IPR024964 CTLH/CRA C-terminal to LisH motif domain
IPR006595 CTLH, C-terminal LisH motif
Mapman id Description
19.2.1.3.1.9 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID9