Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G150000 Populus trichocarpa HOM05D004448 ORTHO05D005919 0.0e+00 1563.9 784 100.0
Sabra06G0118700 Salix brachista HOM05D004448 ORTHO05D005919 1.5e-224 783.5 464 81.9
Dinv36750 Davidia involucrata HOM05D004448 ORTHO05D005919 4.1e-153 546.2 770 43.9
Manes.03G032000 Manihot esculenta HOM05D004448 ORTHO05D005919 7.0e-145 518.8 461 61.6
QL02p063021 Quercus lobata HOM05D004448 ORTHO05D005919 8.9e-132 475.3 662 42.6
Dinv42301 Davidia involucrata HOM05D004448 ORTHO05D005919 5.2e-124 449.5 674 42.3
Haze_25890 Corylus avellana HOM05D004448 ORTHO05D005919 2.7e-120 437.2 571 46.2
GSVIVG01015227001 Vitis vinifera HOM05D004448 ORTHO05D005919 2.3e-119 434.1 564 45.6
Cfa003108 Carpinus fangiana HOM05D004448 ORTHO05D005919 2.4e-116 424.1 569 44.8
Cc06_g11170 Coffea canephora HOM05D004448 ORTHO05D005919 5.8e-115 419.5 727 39.1
Nitab4.5_0000713g0030 Nicotiana tabacum HOM05D004448 ORTHO05D005919 3.8e-114 416.8 586 43.7
Thecc.09G092200 Theobroma cacao HOM05D004448 ORTHO05D005919 5.4e-113 412.9 668 40.1
Hma1.2p1_0663F.1_g198910 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 1.3e-111 408.3 651 39.6
CiPaw.03G218000 Carya illinoinensis HOM05D004448 ORTHO05D005919 3.9e-111 406.8 559 43.3
Actinidia25266 Actinidia chinensis HOM05D004448 ORTHO05D005919 4.4e-107 393.3 449 47.7
PGSC0003DMG400033614 Solanum tuberosum HOM05D004448 ORTHO05D005919 5.8e-107 392.9 541 44.5
Duzib168G0645 Durio zibethinus HOM05D004448 ORTHO05D005919 2.2e-106 391.0 565 43.0
FAN23G3053 Fragaria x ananassa HOM05D004448 ORTHO05D005919 3.8e-106 390.2 755 35.0
FAN19G1271 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.1e-105 388.7 755 34.7
ClCG03G015750 Citrullus lanatus HOM05D004448 ORTHO05D005919 1.9e-105 387.9 459 49.7
Peaxi162Scf00175g00047 Petunia axillaris HOM05D004448 ORTHO05D005919 2.4e-105 387.5 542 43.5
TWI32G1061 Tripterygium wilfordii HOM05D004448 ORTHO05D005919 9.3e-105 385.6 490 46.3
Prupe.7G212600 Prunus persica HOM05D004448 ORTHO05D005919 4.6e-104 383.3 458 48.5
CSS0023607 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 6.6e-103 379.4 456 48.2
COL.COLO4_18221 Corchorus olitorius HOM05D004448 ORTHO05D005919 5.6e-102 376.3 554 42.8
Gohir.A08G245000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 6.2e-101 372.9 554 41.7
Eucgr.C00913 Eucalyptus grandis HOM05D004448 ORTHO05D005919 8.1e-101 372.5 569 40.9
RcHm_v2.0_Chr2g0093041 Rosa chinensis HOM05D004448 ORTHO05D005919 1.1e-100 372.1 476 45.0
FvH4_1g07151 Fragaria vesca HOM05D004448 ORTHO05D005919 1.8e-100 371.3 471 45.2
FAN26G2794 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.5e-99 368.2 458 45.6
Gohir.D08G265800 Gossypium hirsutum HOM05D004448 ORTHO05D005919 9.9e-99 365.5 565 41.4
Ciclev10010615m.g Citrus clementina HOM05D004448 ORTHO05D005919 1.7e-98 364.8 496 42.5
PGR142G4073 Punica granatum HOM05D004448 ORTHO05D005919 1.4e-97 361.7 471 45.4
FAN26G0987 Fragaria x ananassa HOM05D004448 ORTHO05D005919 1.9e-97 361.3 772 34.7
Nitab4.5_0000938g0020 Nicotiana tabacum HOM05D004448 ORTHO05D005919 1.2e-96 358.6 453 45.3
Lj2g0008301 Lotus japonicus HOM05D004448 ORTHO05D005919 3.5e-96 357.1 479 45.3
CANSAT56G0950 Cannabis sativa HOM05D004448 ORTHO05D005919 5.1e-95 353.2 378 52.1
Rhsim05G0022900 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.1e-94 352.1 508 42.1
CsaV3_1G040260 Cucumis sativus L. HOM05D004448 ORTHO05D005919 4.3e-94 350.1 460 46.3
Sopen07g011050 Solanum pennellii HOM05D004448 ORTHO05D005919 4.3e-94 350.1 450 45.8
Phvul.004G171600 Phaseolus vulgaris HOM05D004448 ORTHO05D005919 1.3e-93 348.6 455 45.1
AUR62031324 Chenopodium quinoa HOM05D004448 ORTHO05D005919 1.6e-93 348.2 465 45.6
Solyc07g021550.3 Solanum lycopersicum HOM05D004448 ORTHO05D005919 2.1e-93 347.8 450 45.8
PSO210G3334 Papaver somniferum HOM05D004448 ORTHO05D005919 3.7e-93 347.1 494 41.7
EL10Ac8g19309 Beta vulgaris HOM05D004448 ORTHO05D005919 2.4e-92 344.4 460 45.0
MELO3C015453.2 Cucumis melo HOM05D004448 ORTHO05D005919 9.0e-92 342.4 453 45.3
RhsimUnG0189000 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.2e-91 342.0 460 44.8
CsaV3_UNG066510 Cucumis sativus L. HOM05D004448 ORTHO05D005919 4.5e-91 340.1 442 46.8
AUR62027409 Chenopodium quinoa HOM05D004448 ORTHO05D005919 7.6e-91 339.3 456 45.4
RcHm_v2.0_Chr2g0093031 Rosa chinensis HOM05D004448 ORTHO05D005919 1.1e-89 335.5 542 39.5
PSO210G5509 Papaver somniferum HOM05D004448 ORTHO05D005919 1.4e-89 335.1 490 41.6
Cpa.g.sc7.238 Carica papaya HOM05D004448 ORTHO05D005919 1.9e-89 334.7 305 55.4
Ah.14g085380 Amaranthus hybridus HOM05D004448 ORTHO05D005919 2.5e-89 334.3 460 45.0
Gohir.D08G266000 Gossypium hirsutum HOM05D004448 ORTHO05D005919 5.5e-89 333.2 365 49.0
vmacro17218 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 7.1e-89 332.8 473 43.8
Carub.0008s1726 Capsella rubella HOM05D004448 ORTHO05D005919 3.5e-88 330.5 448 44.6
THA.LOC104813490 Tarenaya hassleriana HOM05D004448 ORTHO05D005919 3.5e-88 330.5 477 41.5
Aa31LG3G12720 Aethionema arabicum HOM05D004448 ORTHO05D005919 7.9e-88 329.3 542 39.9
vmacro22686 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 7.9e-88 329.3 474 43.7
Nn8g38906 Nelumbo nucifera HOM05D004448 ORTHO05D005919 1.3e-87 328.6 503 40.6
Oeu024590.1 Olea europaea HOM05D004448 ORTHO05D005919 6.7e-87 326.2 373 50.1
Sc18g0001910 Simmondsia chinensis HOM05D004448 ORTHO05D005919 6.7e-87 326.2 385 48.6
Atru.chr7.1561 Acer truncatum HOM05D004448 ORTHO05D005919 1.3e-85 322.0 558 37.8
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 1.3e-85 322.0 370 48.9
Rhsim03G0233500 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.1e-85 321.2 626 34.2
DCAR_024685 Daucus carota HOM05D004448 ORTHO05D005919 1.4e-84 318.5 439 42.6
Medtr7g090060 Medicago truncatula HOM05D004448 ORTHO05D005919 3.1e-84 317.4 384 47.9
Gohir.A08G244900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.5e-83 315.1 533 40.0
Lsat_1_v5_gn_5_145680 Lactuca sativa HOM05D004448 ORTHO05D005919 1.5e-83 315.1 445 43.6
Duzib150G0429 Durio zibethinus HOM05D004448 ORTHO05D005919 2.0e-83 314.7 801 33.5
AT5G56780 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 2.6e-83 314.3 449 43.0
Thhalv10015325m.g Eutrema salsugineum HOM05D004448 ORTHO05D005919 1.0e-82 312.4 448 42.9
Sp6g18520 Schrenkiella parvula HOM05D004448 ORTHO05D005919 1.3e-82 312.0 449 41.2
Glyma.07G128700 Glycine max HOM05D004448 ORTHO05D005919 1.7e-82 311.6 456 42.1
MBI08_g34934_MAGBIO Magnolia biondii HOM05D004448 ORTHO05D005919 1.7e-82 311.6 368 47.0
A10p14110 Brassica napus HOM05D004448 ORTHO05D005919 2.9e-82 310.8 452 42.5
BraA10t43502Z Brassica rapa HOM05D004448 ORTHO05D005919 3.8e-82 310.5 452 42.3
Nitab4.5_0004087g0010 Nicotiana tabacum HOM05D004448 ORTHO05D005919 3.8e-82 310.5 380 45.8
Medtr6g092520 Medicago truncatula HOM05D004448 ORTHO05D005919 5.0e-82 310.1 372 47.8
BcaB08g36059 Brassica carinata HOM05D004448 ORTHO05D005919 1.9e-81 308.1 448 42.0
Psat1g049640 Pisum sativum HOM05D004448 ORTHO05D005919 2.1e-80 304.7 375 46.7
Hund06702 Selenicereus undatus HOM05D004448 ORTHO05D005919 2.1e-80 304.7 368 47.0
AL8G32620 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 2.7e-80 304.3 519 38.2
BcaC04g20054 Brassica carinata HOM05D004448 ORTHO05D005919 1.3e-79 302.0 449 41.9
Ciclev10008074m.g Citrus clementina HOM05D004448 ORTHO05D005919 3.9e-79 300.4 535 36.8
C09p48340 Brassica napus HOM05D004448 ORTHO05D005919 5.1e-79 300.1 449 41.6
C04p01820 Brassica napus HOM05D004448 ORTHO05D005919 6.7e-79 299.7 444 41.4
BolC9t57684H Brassica oleracea HOM05D004448 ORTHO05D005919 8.7e-79 299.3 449 41.9
BcaC02g12705 Brassica carinata HOM05D004448 ORTHO05D005919 1.1e-78 298.9 447 40.9
BcaC02g12506 Brassica carinata HOM05D004448 ORTHO05D005919 3.1e-76 290.8 472 39.8
BraA05t19157Z Brassica rapa HOM05D004448 ORTHO05D005919 1.4e-73 282.0 451 39.5
Aqoxy5G03492 Aquilegia oxysepala HOM05D004448 ORTHO05D005919 1.9e-73 281.6 462 38.3
CSS0050052 Camellia sinensis var. sinensis HOM05D004448 ORTHO05D005919 2.5e-73 281.2 541 36.2
Aa31LG2G21230 Aethionema arabicum HOM05D004448 ORTHO05D005919 4.2e-73 280.4 465 39.6
HanXRQChr12g0354731 Helianthus annuus HOM05D004448 ORTHO05D005919 9.4e-73 279.3 449 40.1
CARHR270530 Cardamine hirsuta HOM05D004448 ORTHO05D005919 6.1e-72 276.6 438 40.0
SalBow6G4094 Salvia bowleyana HOM05D004448 ORTHO05D005919 6.1e-72 276.6 389 43.7
arahy.Tifrunner.gnm1.ann1.LLR3FQ Arachis hypogaea HOM05D004448 ORTHO05D005919 7.9e-72 276.2 378 43.1
arahy.Tifrunner.gnm1.ann1.6Q96ZG Arachis hypogaea HOM05D004448 ORTHO05D005919 1.0e-71 275.8 377 42.7
CDE09G0006 Ceratophyllum demersum HOM05D004448 ORTHO05D005919 2.4e-68 264.6 456 37.9
Ca_08398_v3 Cicer arietinum L. HOM05D004448 ORTHO05D005919 1.2e-67 262.3 295 51.5
ECA234G2909 Erigeron canadensis HOM05D004448 ORTHO05D005919 3.2e-65 254.2 446 36.8
FvH4_1g07150 Fragaria vesca HOM05D004448 ORTHO05D005919 1.8e-63 248.4 625 30.6
A05p01610 Brassica napus HOM05D004448 ORTHO05D005919 3.3e-62 244.2 301 45.2
Migut.J00591 Erythranthe guttata HOM05D004448 ORTHO05D005919 7.4e-62 243.0 301 45.5
vmacro06280 Vaccinium macrocarpon HOM05D004448 ORTHO05D005919 2.2e-61 241.5 311 46.3
Zm00001eb325970 Zea mays HOM05D004448 ORTHO05D005919 2.4e-60 238.0 583 33.6
unitig_0.g218 Utricularia gibba HOM05D004448 ORTHO05D005919 5.3e-60 236.9 384 39.1
Mapoly0070s0093 Marchantia polymorpha HOM05D004448 ORTHO05D005919 7.0e-60 236.5 414 36.7
HPP92_006937 Vanilla planifolia HOM05D004448 ORTHO05D005919 2.5e-57 228.0 286 46.2
Os07g0586700 Oryza sativa ssp. japonica HOM05D004448 ORTHO05D005919 9.7e-54 216.1 502 32.5
Pp3c3_34250 Physcomitrium patens HOM05D004448 ORTHO05D005919 8.2e-53 213.0 325 39.4
Gohir.A08G245100 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.2e-51 209.1 351 39.3
AagrBONN_evm.TU.Sc2ySwM_117.4075 Anthoceros agrestis HOM05D004448 ORTHO05D005919 5.9e-51 206.8 388 34.3
ATR0705G152 Amborella trichopoda HOM05D004448 ORTHO05D005919 3.8e-50 204.1 300 43.3
Pp3c4_9790 Physcomitrium patens HOM05D004448 ORTHO05D005919 3.6e-48 197.6 334 36.8
Rhsim03G0233900 Rhododendron simsii HOM05D004448 ORTHO05D005919 3.0e-47 194.5 188 56.4
MD02G1076000 Malus domestica HOM05D004448 ORTHO05D005919 4.0e-47 194.1 144 68.1
CBR_g29538 Chara braunii HOM05D004448 ORTHO05D005919 4.4e-46 190.7 482 30.7
Gorai.N024000 Gossypium raimondii HOM05D004448 ORTHO05D005919 2.8e-45 188.0 298 40.9
CARHR270520 Cardamine hirsuta HOM05D004448 ORTHO05D005919 1.1e-44 186.0 321 39.3
SMO139G0129 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 1.6e-43 182.2 333 37.5
Sed0012121 Sechium edule HOM05D004448 ORTHO05D005919 3.5e-43 181.0 313 37.1
TPR.G40396 Trifolium pratense HOM05D004448 ORTHO05D005919 3.0e-39 167.9 226 44.2
Pp3c16_1200 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.3e-37 162.5 544 29.0
TPR.G35500 Trifolium pratense HOM05D004448 ORTHO05D005919 2.8e-37 161.4 148 58.1
Lalb_Chr24g0393831 Lupinus albus HOM05D004448 ORTHO05D005919 1.1e-36 159.5 153 56.2
SGA_v2.0_scaffold62G21589 Striga asiatica HOM05D004448 ORTHO05D005919 5.4e-36 157.1 148 54.7
Pp3c27_3080 Physcomitrium patens HOM05D004448 ORTHO05D005919 1.2e-35 156.0 553 28.2
CANSAT56G3488 Cannabis sativa HOM05D004448 ORTHO05D005919 2.0e-35 155.2 231 42.4
MD02G1075500 Malus domestica HOM05D004448 ORTHO05D005919 2.7e-35 154.8 212 40.6
RhsimUnG0145000 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.0e-34 152.9 232 40.9
SMO157G0009 Selaginella moellendorffii HOM05D006068 ORTHO05D007579 6.6e-34 150.2 292 35.6
Atru.chr7.1554 Acer truncatum HOM05D004448 ORTHO05D005919 7.3e-33 146.7 312 33.3
AT5G56770 Arabidopsis thaliana HOM05D004448 ORTHO05D005919 8.9e-31 139.8 188 44.7
TPR.G35590 Trifolium pratense HOM05D004448 ORTHO05D005919 1.7e-29 135.6 103 64.1
AL8G32610 Arabidopsis lyrata HOM05D004448 ORTHO05D005919 6.4e-29 133.7 171 41.5
Aa31LG3G540 Aethionema arabicum HOM05D001256 ORTHO05D001141 3.2e-28 131.3 487 25.7
CARHR233700 Cardamine hirsuta HOM05D004448 ORTHO05D015948 5.4e-28 130.6 479 27.8
Gohir.D08G265900 Gossypium hirsutum HOM05D004448 ORTHO05D005919 1.0e-26 126.3 298 33.2
AL7G26800 Arabidopsis lyrata HOM05D004448 ORTHO05D015948 3.9e-26 124.4 481 26.6
Pp3c15_21310 Physcomitrium patens HOM05D004448 ORTHO05D005919 3.9e-26 124.4 194 38.7
RhsimUnG0144800 Rhododendron simsii HOM05D004448 ORTHO05D005919 8.6e-26 123.2 304 31.2
Rhsim05G0023200 Rhododendron simsii HOM05D004448 ORTHO05D005919 1.5e-25 122.5 291 31.3
Atru.chr7.1555 Acer truncatum HOM05D004448 ORTHO05D005919 1.2e-24 119.4 102 55.9
Sp7g24190 Schrenkiella parvula HOM05D004448 ORTHO05D015948 2.0e-22 112.1 488 24.8
SalBow1G6253 Salvia bowleyana HOM05D004448 ORTHO05D005919 2.6e-22 111.7 142 43.7
Thhalv10025245m.g Eutrema salsugineum HOM05D004448 ORTHO05D015948 3.4e-22 111.3 439 27.1
Carub.0008s1725 Capsella rubella HOM05D004448 ORTHO05D005919 4.4e-22 110.9 187 39.0
AT4G26170 Arabidopsis thaliana HOM05D004448 ORTHO05D015948 1.4e-20 105.9 420 27.1
RhsimUnG0032400 Rhododendron simsii HOM05D004448 ORTHO05D005919 2.3e-18 98.6 132 41.7
Medtr6g092500 Medicago truncatula HOM05D004448 ORTHO05D005919 3.6e-16 91.3 112 45.5
Hma1.2p1_0024F.1_g016070 Hydrangea macrophylla HOM05D004448 ORTHO05D005919 1.4e-15 89.4 91 54.9
Pp3c5_7060 Physcomitrium patens HOM05D004448 ORTHO05D005919 2.0e-14 85.5 183 32.8
CBR_g20264 Chara braunii HOM05D000505 ORTHO05D000301 3.5e-11 74.7 139 33.8
Medtr6g092480 Medicago truncatula HOM05D012533 ORTHO05D264910 2.3e-10 72.0 58 56.9
FvH4_1g07231 Fragaria vesca HOM05D004448 ORTHO05D005919 3.6e-08 64.7 125 32.8
Glyma.01G003300 Glycine max HOM05D004448 ORTHO05D005919 1.4e-07 62.8 72 48.6
Carub.0007s1478 Capsella rubella HOM05D004448 ORTHO05D015948 4.0e-07 61.2 134 30.6


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