Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G113301 Populus trichocarpa HOM05D005767 ORTHO05D006785 5.1e-136 487.6 232 100.0
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 5.2e-56 221.9 258 50.0
Sabra07G0049300 Salix brachista HOM05D005767 ORTHO05D006785 1.7e-54 216.9 280 46.1
Duzib147G1641 Durio zibethinus HOM05D005767 ORTHO05D006785 4.3e-50 202.2 237 46.0
Gohir.D11G182500 Gossypium hirsutum HOM05D005767 ORTHO05D006785 5.6e-50 201.8 286 40.9
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 4.5e-47 192.2 265 40.8
Manes.01G146000 Manihot esculenta HOM05D005767 ORTHO05D006785 3.8e-46 189.1 266 42.1
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 2.4e-45 186.4 265 40.0
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 2.4e-45 186.4 265 40.4
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 5.4e-45 185.3 264 40.2
FAN26G3405 Fragaria x ananassa HOM05D005767 ORTHO05D006785 1.2e-44 184.1 235 45.5
QL06p032910 Quercus lobata HOM05D005767 ORTHO05D006785 3.9e-43 179.1 263 40.7
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 3.9e-43 179.1 260 41.5
Ciclev10025146m.g Citrus clementina HOM05D005767 ORTHO05D006785 6.7e-43 178.3 262 40.8
FvH4_1g11761 Fragaria vesca HOM05D005767 ORTHO05D006785 6.7e-43 178.3 260 41.5
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 8.7e-43 177.9 267 40.1
FAN19G2575 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.5e-42 176.4 260 41.2
Lsat_1_v5_gn_4_144841 Lactuca sativa HOM05D005767 ORTHO05D006785 2.5e-42 176.4 268 39.2
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 1.3e-41 174.1 282 37.9
CiPaw.07G058900 Carya illinoinensis HOM05D005767 ORTHO05D006785 1.3e-41 174.1 268 39.2
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 2.1e-41 173.3 200 46.5
TWI73G0295 Tripterygium wilfordii HOM05D005767 ORTHO05D006785 2.1e-41 173.3 144 58.3
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 3.7e-41 172.6 263 40.7
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 1.1e-40 171.0 263 39.9
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 1.1e-40 171.0 269 38.3
Sc16g0002260 Simmondsia chinensis HOM05D005767 ORTHO05D006785 1.8e-40 170.2 269 37.9
Eucgr.I02343 Eucalyptus grandis HOM05D005767 ORTHO05D006785 5.3e-40 168.7 107 66.4
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 5.3e-40 168.7 196 44.4
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 5.3e-40 168.7 265 38.5
GSVIVG01018776001 Vitis vinifera HOM05D005767 ORTHO05D006785 6.9e-40 168.3 269 39.0
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 4.5e-39 165.6 265 37.7
FAN26G2808 Fragaria x ananassa HOM05D005767 ORTHO05D006785 5.8e-39 165.2 287 36.9
SHI08521 Sapria himalayana HOM05D000565 ORTHO05D002009 5.8e-39 165.2 263 38.8
Sp7g33830 Schrenkiella parvula HOM05D005767 ORTHO05D006785 9.9e-39 164.5 268 37.7
Carub.0007s0418 Capsella rubella HOM05D005767 ORTHO05D006785 1.7e-38 163.7 268 37.7
Lj2C469G1 Lonicera japonica HOM05D005767 ORTHO05D006785 2.2e-38 163.3 270 38.9
MBI09_g09407_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 2.2e-38 163.3 114 62.3
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 3.8e-38 162.5 270 35.6
Aqoxy6G02211 Aquilegia oxysepala HOM05D005767 ORTHO05D006785 4.9e-38 162.2 273 36.6
Aa31LG6G13010 Aethionema arabicum HOM05D005767 ORTHO05D006785 6.4e-38 161.8 269 37.2
BraA01t00254Z Brassica rapa HOM05D005767 ORTHO05D006785 6.4e-38 161.8 270 37.4
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 6.4e-38 161.8 268 36.2
Thhalv10024709m.g Eutrema salsugineum HOM05D005767 ORTHO05D006785 8.4e-38 161.4 268 37.3
AL7G15000 Arabidopsis lyrata HOM05D005767 ORTHO05D006785 1.1e-37 161.0 268 36.6
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 1.9e-37 160.2 265 37.0
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 1.9e-37 160.2 268 36.6
TPR.G27975 Trifolium pratense HOM05D005767 ORTHO05D006785 1.9e-37 160.2 270 37.4
vmacro22135 Vaccinium macrocarpon HOM05D005767 ORTHO05D006785 1.9e-37 160.2 241 39.0
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 4.2e-37 159.1 268 37.7
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 4.2e-37 159.1 269 38.7
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 5.5e-37 158.7 268 37.3
Phvul.003G261600 Phaseolus vulgaris HOM05D005767 ORTHO05D006785 7.1e-37 158.3 242 41.7
A01p02680 Brassica napus HOM05D005767 ORTHO05D006785 9.3e-37 157.9 152 53.3
BolC1t00284H Brassica oleracea HOM05D005767 ORTHO05D006785 1.2e-36 157.5 152 52.0
AUR62003364 Chenopodium quinoa HOM05D005767 ORTHO05D006785 2.1e-36 156.8 267 36.3
C01p02980 Brassica napus HOM05D005767 ORTHO05D006785 3.5e-36 156.0 152 52.0
Lj4g0015609 Lotus japonicus HOM05D005767 ORTHO05D006785 4.6e-36 155.6 269 37.5
PSO541G2118 Papaver somniferum HOM05D005767 ORTHO05D006785 4.6e-36 155.6 276 36.2
AUR62029469 Chenopodium quinoa HOM05D005767 ORTHO05D006785 6.0e-36 155.2 267 36.3
Cc07_g10770 Coffea canephora HOM05D005767 ORTHO05D006785 6.0e-36 155.2 268 35.8
AT4G36050 Arabidopsis thaliana HOM05D005767 ORTHO05D006785 7.9e-36 154.8 151 51.7
ECA232G4495 Erigeron canadensis HOM05D005767 ORTHO05D006785 7.9e-36 154.8 270 37.4
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 7.9e-36 154.8 268 35.4
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 1.0e-35 154.5 270 37.8
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 2.3e-35 153.3 266 38.7
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 2.3e-35 153.3 267 35.2
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 3.0e-35 152.9 270 36.3
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 3.0e-35 152.9 142 52.8
ATR0810G226 Amborella trichopoda HOM05D005767 ORTHO05D006785 6.7e-35 151.8 273 34.8
arahy.Tifrunner.gnm1.ann1.G0D851 Arachis hypogaea HOM05D005767 ORTHO05D006785 8.7e-35 151.4 218 39.9
arahy.Tifrunner.gnm1.ann1.12F6XV Arachis hypogaea HOM05D005767 ORTHO05D006785 1.1e-34 151.0 218 39.9
Hund16493 Selenicereus undatus HOM05D005767 ORTHO05D006785 1.9e-34 150.2 273 34.8
Lalb_Chr05g0229851 Lupinus albus HOM05D005767 ORTHO05D006785 2.5e-34 149.8 113 60.2
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 3.3e-34 149.4 268 36.6
Hma1.2p1_1115F.1_g258820 Hydrangea macrophylla HOM05D005767 ORTHO05D006785 9.6e-34 147.9 267 35.6
Rhsim10G0211700 Rhododendron simsii HOM05D005767 ORTHO05D006785 1.3e-33 147.5 288 33.7
Peaxi162Scf00050g00215 Petunia axillaris HOM05D005767 ORTHO05D006785 3.7e-33 146.0 268 35.1
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 3.7e-33 146.0 269 35.7
Ah.03g148810 Amaranthus hybridus HOM05D005767 ORTHO05D006785 6.2e-33 145.2 269 33.1
Oeu035312.2 Olea europaea HOM05D005767 ORTHO05D006785 1.1e-32 144.4 107 55.1
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 1.8e-32 143.7 256 37.1
Migut.N01741 Erythranthe guttata HOM05D005767 ORTHO05D006785 3.1e-32 142.9 270 35.6
SGA_v2.0_scaffold76G25121 Striga asiatica HOM05D005767 ORTHO05D006785 6.9e-32 141.7 268 35.8
MSTRG.23406 Avicennia marina HOM05D005767 ORTHO05D006785 9.0e-32 141.4 270 34.4
BcaNung00769 Brassica carinata HOM05D005767 ORTHO05D006785 2.9e-30 136.3 151 49.0
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 6.5e-30 135.2 325 31.4
unitig_32.g10945 Utricularia gibba HOM05D005767 ORTHO05D006785 8.4e-30 134.8 258 32.6
HPP92_005447 Vanilla planifolia HOM05D005767 ORTHO05D006785 3.5e-28 129.4 281 31.0
CDE04G0100 Ceratophyllum demersum HOM05D005767 ORTHO05D006785 3.7e-25 119.4 267 31.8
Os09g0536000 Oryza sativa ssp. japonica HOM05D005767 ORTHO05D006785 1.4e-24 117.5 272 29.4
Mapoly0107s0007 Marchantia polymorpha HOM05D005767 ORTHO05D006785 2.6e-23 113.2 109 45.9
AagrBONN_evm.TU.Sc2ySwM_344.3375 Anthoceros agrestis HOM05D005767 ORTHO05D006785 1.9e-21 107.1 104 48.1
SMO356G0595 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 1.9e-21 107.1 109 45.9
SMO290G0007 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 6.1e-20 102.1 118 42.4
Actinidia22973 Actinidia chinensis HOM05D005767 ORTHO05D006785 7.4e-18 95.1 214 34.6
Pp3c17_13320 Physcomitrium patens HOM05D005767 ORTHO05D006785 1.2e-15 87.8 134 33.6
CBR_g18710 Chara braunii HOM05D005767 ORTHO05D006785 1.3e-14 84.3 132 37.1
SMO356G0296 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 3.8e-14 82.8 103 40.8
SEGI_12703 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 3.8e-14 82.8 68 48.5
MD15G1244900 Malus domestica HOM05D005767 ORTHO05D006785 1.2e-12 77.8 54 61.1
SMO356G0427 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 4.8e-09 65.9 69 47.8
CARHR244450 Cardamine hirsuta HOM05D005767 ORTHO05D006785 8.2e-09 65.1 44 61.4


User provided reference genes

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