Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 2146.7 1073 100.0
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 0.0e+00 2035.0 1097 94.0
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 0.0e+00 1973.0 1091 91.8
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 0.0e+00 1862.0 1131 82.4
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 0.0e+00 1811.2 1096 82.8
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 0.0e+00 1798.9 1108 81.3
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 0.0e+00 1784.6 1084 82.3
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1757.7 1042 83.1
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1752.3 1073 81.2
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 0.0e+00 1621.3 1103 74.3
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 0.0e+00 1600.1 1093 73.7
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 0.0e+00 1590.9 1087 73.4
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 0.0e+00 1590.1 1083 74.0
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1568.9 1080 72.6
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 0.0e+00 1566.6 1083 73.3
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 0.0e+00 1542.3 1096 70.6
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1539.2 1089 71.3
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 0.0e+00 1536.9 1088 70.7
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1534.2 1086 70.9
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 0.0e+00 1530.4 1090 70.1
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1528.5 1090 70.9
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1525.8 1090 70.9
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 0.0e+00 1525.8 1089 70.9
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1525.4 1080 71.5
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1525.0 1112 69.4
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 0.0e+00 1521.9 866 87.3
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 0.0e+00 1515.0 1077 71.5
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1504.6 1082 71.0
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 0.0e+00 1504.6 1113 69.1
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 0.0e+00 1498.4 1072 69.6
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 0.0e+00 1491.1 1088 69.7
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 0.0e+00 1484.9 1087 68.7
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 0.0e+00 1474.5 1078 69.6
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1471.1 1078 69.6
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 0.0e+00 1463.7 1088 68.1
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 0.0e+00 1461.4 1078 68.1
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 0.0e+00 1460.3 982 74.2
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 0.0e+00 1456.4 1094 67.9
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1452.6 1135 66.2
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 0.0e+00 1451.8 1185 65.1
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 0.0e+00 1449.9 1122 65.3
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 0.0e+00 1446.8 1084 67.0
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 0.0e+00 1445.6 1085 68.7
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 0.0e+00 1440.2 1144 64.3
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1439.9 1098 67.7
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 0.0e+00 1433.7 1087 67.2
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1433.7 1082 67.9
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1429.8 1094 67.7
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 0.0e+00 1429.1 1085 67.6
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1424.5 1088 67.8
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1423.3 1086 67.8
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1417.9 1088 67.6
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1415.2 1094 67.0
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 0.0e+00 1415.2 1074 68.2
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 0.0e+00 1413.3 1089 67.1
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 0.0e+00 1412.1 1084 67.2
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 0.0e+00 1406.3 1087 67.1
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 0.0e+00 1401.3 1015 68.6
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 0.0e+00 1399.0 1126 65.5
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 0.0e+00 1393.6 1042 68.3
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 0.0e+00 1386.3 1080 64.6
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 0.0e+00 1382.1 1076 64.7
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 0.0e+00 1377.5 1077 65.5
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1374.8 1077 66.3
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 0.0e+00 1366.3 1083 63.6
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1362.4 1115 62.7
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 0.0e+00 1362.1 1173 60.9
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 0.0e+00 1349.0 858 75.9
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1340.9 1081 64.7
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1337.0 1084 63.0
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1334.7 1082 63.4
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 0.0e+00 1332.8 1206 58.4
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 0.0e+00 1330.9 858 75.1
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 0.0e+00 1318.5 1094 62.8
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1317.4 1093 62.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 0.0e+00 1313.5 1084 62.9
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 0.0e+00 1303.9 1084 63.0
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1297.7 1106 61.5
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 0.0e+00 1295.0 857 73.2
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1294.3 1086 61.6
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 0.0e+00 1291.6 854 73.3
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 0.0e+00 1283.9 846 73.5
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 0.0e+00 1278.5 1072 60.7
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 0.0e+00 1268.4 819 75.2
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 0.0e+00 1251.9 857 70.5
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 0.0e+00 1238.8 1086 60.0
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 0.0e+00 1212.2 1202 55.3
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 0.0e+00 1204.5 858 69.0
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 0.0e+00 1200.7 825 70.1
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1200.3 1041 61.0
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1197.2 1001 63.3
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 0.0e+00 1190.6 927 65.7
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1187.2 1010 62.8
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 0.0e+00 1186.4 1085 58.2
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1124.0 1085 57.5
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 0.0e+00 1104.0 1060 55.8
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1101.3 857 64.6
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.2e-304 1050.0 700 73.3
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 5.4e-297 1024.6 708 74.7
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.1e-276 957.2 900 56.4
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 3.0e-263 912.5 1100 46.4
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 5.8e-259 898.3 593 73.0
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 2.9e-258 896.0 641 68.6
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 1.0e-255 887.5 979 49.1
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 3.3e-246 855.9 970 47.7
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 9.4e-209 731.5 948 43.6
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 2.8e-200 703.4 499 71.1
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 3.7e-197 693.0 536 67.7
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 1.6e-192 677.6 405 85.2
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 2.4e-151 540.8 472 60.4
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 3.2e-140 503.8 1085 33.4
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.0e-130 472.2 399 63.4
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 3.7e-120 437.2 321 67.9
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 8.5e-117 426.0 389 55.8
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 1.5e-92 345.5 291 62.5
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 2.3e-82 311.6 161 94.4
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 1.9e-76 292.0 203 76.8
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 2.1e-75 288.5 297 53.2
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.4e-72 276.9 219 66.7
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.1e-66 259.6 233 59.2
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 1.9e-55 222.2 174 64.9
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 5.1e-53 214.2 210 59.5
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.3e-52 211.5 174 64.4
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.9e-47 195.7 194 58.8
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 6.6e-45 187.2 227 52.9
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 5.6e-44 184.1 144 63.9
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.6e-38 166.0 170 50.0
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 7.8e-38 163.7 162 51.9
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 5.6e-36 157.5 179 53.1
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 1.6e-35 156.0 178 53.9
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 1.4e-34 152.9 92 76.1
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 9.9e-33 146.7 171 50.3
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.3e-32 146.4 204 47.5
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 6.4e-32 144.1 154 55.2
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.2e-31 141.7 100 64.0
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.2e-31 141.4 104 61.5
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 7.9e-30 137.1 107 66.4
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 7.4e-28 130.6 99 61.6
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 9.6e-28 130.2 174 49.4
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 2.4e-26 125.6 97 60.8
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 1.1e-23 116.7 171 41.5
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 1.3e-21 109.8 84 69.0
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 8.7e-21 107.1 76 67.1
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 9.6e-20 103.6 126 46.0
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.7e-19 101.7 100 49.0
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 7.6e-17 94.0 73 60.3
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 2.2e-16 92.4 460 25.4
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 3.8e-16 91.7 422 27.5
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 1.9e-15 89.4 140 43.6
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 3.9e-13 81.6 207 31.9
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 4.8e-11 74.7 139 39.6
BolC2t10453H Brassica oleracea HOM05D001849 ORTHO05D004689 4.5e-09 68.2 53 64.2
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 1.0e-08 67.0 69 55.1
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.3e-08 66.6 61 54.1
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 1.3e-08 66.6 185 28.1
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.7e-08 66.2 40 77.5
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.9e-08 65.5 59 59.3
C02p44100 Brassica napus HOM05D001849 ORTHO05D004689 5.0e-08 64.7 53 62.3
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 4.2e-07 61.6 39 74.4
SMO304G0098 Selaginella moellendorffii HOM05D027722 ORTHO05D004689 7.2e-07 60.8 190 28.9
SMO164G0082 Selaginella moellendorffii HOM05D027722 ORTHO05D004689 9.4e-07 60.5 155 27.7
Atru.chr12.2376 Acer truncatum HOM05D001849 ORTHO05D004689 1.2e-06 60.1 120 35.8
C01p30760 Brassica napus HOM05D001849 ORTHO05D042635 1.6e-06 59.7 41 73.2
SMO304G0054 Selaginella moellendorffii HOM05D027722 ORTHO05D004689 1.6e-06 59.7 190 28.9
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 4.6e-06 58.2 62 54.8
CSS0002239 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.1e-06 57.8 41 68.3


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