Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 1.8e-204 715.7 361 100.0
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 8.4e-202 706.8 361 98.6
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 3.0e-191 671.8 361 93.1
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 5.3e-188 661.0 362 92.3
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 6.5e-178 627.5 361 85.9
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 3.0e-175 618.6 362 85.4
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 3.3e-174 615.1 362 84.5
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 3.3e-174 615.1 361 84.5
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 2.5e-166 589.0 362 81.8
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 4.3e-166 588.2 362 81.2
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 1.0e-162 577.0 353 82.2
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 5.0e-154 548.1 364 76.4
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 1.0e-151 540.4 298 90.3
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 1.4e-151 540.0 362 75.4
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 1.5e-150 536.6 364 74.5
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 9.7e-150 533.9 357 75.9
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 2.8e-149 532.3 364 74.5
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 3.7e-149 531.9 364 74.7
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 4.8e-149 531.6 364 72.3
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 2.0e-147 526.2 364 73.9
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.6e-147 525.8 364 73.9
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.2e-146 522.7 366 73.5
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 3.8e-146 521.9 364 73.6
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 1.1e-145 520.4 364 73.4
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 1.1e-145 520.4 364 72.5
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 4.2e-145 518.5 364 73.4
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 4.2e-145 518.5 362 72.1
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 5.5e-145 518.1 364 72.5
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 7.2e-145 517.7 364 72.3
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 7.2e-145 517.7 364 73.1
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 1.2e-144 516.9 364 72.0
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 1.2e-144 516.9 367 73.3
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 2.1e-144 516.2 380 69.7
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 2.7e-144 515.8 367 73.0
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.6e-144 515.4 364 73.1
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.6e-144 515.4 364 73.1
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 3.6e-144 515.4 364 72.0
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 4.7e-144 515.0 364 72.0
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 4.7e-144 515.0 364 72.3
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 8.0e-144 514.2 364 72.8
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 1.4e-143 513.5 365 72.1
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 2.3e-143 512.7 364 72.8
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 3.0e-143 512.3 368 72.0
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 4.0e-143 511.9 364 71.4
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 2.6e-142 509.2 364 70.1
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 7.5e-142 507.7 374 70.1
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 1.3e-141 506.9 385 67.5
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 2.2e-141 506.1 364 69.8
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 3.7e-141 505.4 364 69.8
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 3.7e-141 505.4 364 69.8
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 2.4e-140 502.7 364 69.5
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 3.1e-140 502.3 364 69.2
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 4.1e-140 501.9 366 71.6
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 4.1e-140 501.9 365 68.5
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 1.1e-137 493.8 363 70.8
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 1.5e-137 493.4 365 69.0
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 1.5e-137 493.4 364 69.8
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 6.1e-136 488.0 363 68.9
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 2.3e-135 486.1 365 68.2
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 2.3e-135 486.1 363 68.9
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 3.0e-135 485.7 361 67.9
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 4.0e-135 485.3 361 67.9
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 5.2e-135 485.0 369 67.8
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 1.2e-134 483.8 366 68.6
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.5e-131 472.2 337 70.0
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 5.9e-131 471.5 365 66.0
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 2.2e-130 469.5 366 65.0
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 2.9e-130 469.2 365 67.4
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 3.8e-130 468.8 364 65.9
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 1.1e-129 467.2 364 67.6
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 3.2e-129 465.7 364 67.3
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 7.2e-129 464.5 366 67.2
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 7.2e-129 464.5 364 67.6
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 1.2e-128 463.8 366 66.9
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 2.1e-128 463.0 363 67.2
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 2.1e-128 463.0 307 74.9
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 8.0e-128 461.1 356 68.8
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.0e-127 460.7 364 68.4
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 1.8e-127 459.9 364 67.3
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 2.3e-127 459.5 366 66.4
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 2.3e-127 459.5 364 66.8
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 4.0e-127 458.8 364 67.0
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 2.0e-126 456.4 357 66.7
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 5.7e-126 454.9 391 62.9
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 6.3e-125 451.4 363 67.2
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 6.3e-125 451.4 363 64.7
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 3.1e-124 449.1 392 61.2
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 5.4e-124 448.4 365 65.2
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 5.0e-122 441.8 371 64.4
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 6.6e-122 441.4 364 65.7
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 1.1e-121 440.7 369 63.1
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 2.1e-120 436.4 320 69.1
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 2.2e-117 426.4 333 68.2
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 3.9e-114 415.6 366 57.9
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 1.6e-112 410.2 379 57.3
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 2.6e-110 402.9 367 56.9
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 7.5e-110 401.4 364 58.5
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 8.3e-109 397.9 354 57.6
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 1.1e-108 397.5 363 60.6
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 5.0e-106 388.7 341 59.8
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 1.6e-104 383.6 276 69.2
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 6.2e-104 381.7 363 57.6
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 8.9e-103 377.9 363 57.0
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.4e-102 375.6 378 57.7
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 8.3e-101 371.3 307 59.9
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 1.9e-97 360.1 381 49.9
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 3.4e-94 349.4 244 71.7
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 3.2e-84 316.2 195 80.0
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 1.6e-83 313.9 349 47.6
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 4.6e-83 312.4 349 47.0
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 4.6e-83 312.4 194 78.9
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 4.8e-80 302.4 173 87.3
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 9.9e-78 294.7 169 86.4
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 2.4e-76 290.0 402 42.8
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 1.0e-74 284.6 364 48.4
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 1.5e-73 280.8 277 55.6
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 9.3e-68 261.5 214 61.2
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 1.1e-63 248.1 306 49.3
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 9.0e-63 245.0 191 70.2
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 3.0e-58 229.9 213 56.3
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.9e-50 203.0 122 84.4
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 8.7e-50 201.8 160 64.4
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 9.7e-49 198.4 122 82.8
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.4e-44 184.5 137 70.1
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 4.6e-43 179.5 165 59.4
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 4.6e-43 179.5 307 40.7
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 1.5e-41 174.5 253 42.3
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 1.8e-39 167.5 197 46.7
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.2e-38 164.9 122 72.1
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 9.4e-36 155.2 135 61.5
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.6e-35 154.5 141 61.0
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 9.7e-33 145.2 176 43.2
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 1.2e-27 128.3 134 53.7
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 2.2e-24 117.5 114 51.8
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.7e-24 116.7 72 79.2
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 1.4e-23 114.8 72 80.6
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 5.3e-23 112.8 410 24.9
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 5.9e-22 109.4 81 69.1
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.5e-17 94.7 77 61.0
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-13 81.3 134 34.3


User provided reference genes

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