Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 3.6e-205 718.0 361 100.0
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 8.4e-202 706.8 361 98.6
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 3.3e-190 668.3 361 92.5
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 4.5e-187 657.9 362 91.7
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 7.1e-177 624.0 361 85.3
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 4.3e-174 614.8 362 84.8
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 5.7e-174 614.4 362 84.5
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 4.8e-173 611.3 361 83.9
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 9.7e-166 587.0 362 81.5
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 1.6e-165 586.3 362 80.9
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 3.8e-162 575.1 353 81.9
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 3.2e-153 545.4 364 76.1
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 1.4e-151 540.0 362 75.1
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 3.9e-151 538.5 364 74.7
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 1.1e-150 537.0 298 89.6
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 6.3e-149 531.2 364 74.2
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 6.3e-149 531.2 357 75.6
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 1.4e-148 530.0 364 72.0
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 1.4e-148 530.0 364 74.5
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 1.6e-147 526.6 364 74.2
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 1.0e-146 523.9 364 73.6
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 5.0e-146 521.5 364 73.9
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 8.5e-146 520.8 364 73.6
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.5e-145 520.0 366 73.2
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 1.9e-145 519.6 364 73.4
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 2.5e-145 519.2 364 72.5
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 5.5e-145 518.1 364 73.1
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 7.2e-145 517.7 364 72.5
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.1e-144 516.2 364 73.4
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.1e-144 516.2 364 73.4
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 2.1e-144 516.2 362 71.8
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 2.7e-144 515.8 364 72.3
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 2.7e-144 515.8 364 72.3
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 4.7e-144 515.0 367 72.5
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 4.7e-144 515.0 364 73.1
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 6.1e-144 514.6 367 73.0
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 1.4e-143 513.5 364 71.4
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 1.4e-143 513.5 365 71.8
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 1.8e-143 513.1 364 72.0
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 2.3e-143 512.7 380 69.5
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 4.0e-143 511.9 364 71.4
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 6.7e-143 511.1 364 71.4
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 1.1e-142 510.4 364 72.5
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 1.5e-142 510.0 368 71.7
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 3.7e-141 505.4 374 69.8
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 4.8e-141 505.0 364 69.5
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 8.2e-141 504.2 364 69.8
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 1.4e-140 503.4 364 69.8
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 2.4e-140 502.7 385 66.8
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 4.1e-140 501.9 364 69.8
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 7.0e-140 501.1 364 69.2
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 1.2e-139 500.4 364 69.2
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 2.0e-139 499.6 365 68.2
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.7e-139 499.2 366 71.3
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 3.6e-136 488.8 365 68.5
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 6.1e-136 488.0 363 70.0
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 8.0e-136 487.6 364 69.0
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 1.5e-134 483.4 363 68.3
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 1.5e-134 483.4 365 68.2
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 1.5e-134 483.4 363 68.9
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 1.5e-134 483.4 361 67.6
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 2.0e-134 483.0 361 67.6
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 5.7e-134 481.5 369 67.5
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 7.5e-134 481.1 366 68.6
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 5.9e-131 471.5 365 67.7
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 1.0e-130 470.7 365 66.0
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 1.7e-130 469.9 364 67.9
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 2.9e-130 469.2 337 69.7
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 3.8e-130 468.8 366 65.3
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 3.8e-130 468.8 364 67.6
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 1.5e-129 466.8 366 67.5
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 1.9e-129 466.5 366 67.2
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 2.5e-129 466.1 363 67.5
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 9.4e-129 464.2 356 69.1
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 9.4e-129 464.2 307 74.9
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 9.4e-129 464.2 364 65.4
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 3.6e-128 462.2 366 66.7
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.6e-128 462.2 364 67.3
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 3.6e-128 462.2 364 67.6
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 4.7e-128 461.8 364 67.3
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 4.7e-128 461.8 364 66.8
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 5.2e-127 458.4 364 68.1
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 1.2e-126 457.2 391 63.2
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 9.8e-126 454.1 363 67.5
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 1.7e-125 453.4 357 66.4
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 3.1e-124 449.1 363 64.5
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 5.4e-124 448.4 365 65.2
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 3.5e-123 445.7 392 60.7
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 1.7e-122 443.4 364 65.9
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 3.3e-121 439.1 371 64.2
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 7.3e-121 438.0 369 62.9
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 1.4e-119 433.7 320 69.1
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 4.1e-116 422.2 333 67.3
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 8.6e-114 414.5 366 57.9
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 1.4e-111 407.1 379 57.0
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 2.9e-109 399.4 358 57.8
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 3.7e-109 399.1 364 58.2
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 3.7e-109 399.1 367 56.4
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 1.9e-108 396.7 363 60.6
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 1.2e-104 384.0 363 57.6
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 8.1e-104 381.3 341 58.9
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 1.8e-103 380.2 276 68.8
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 3.4e-102 375.9 380 57.4
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 5.8e-102 375.2 363 56.5
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.3e-98 364.0 307 58.6
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 6.2e-96 355.1 381 49.3
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 2.2e-93 346.7 244 71.3
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 7.1e-84 315.1 195 79.5
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 1.3e-82 310.8 194 78.4
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 2.3e-82 310.1 349 46.7
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 3.0e-82 309.7 349 46.7
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 3.1e-79 299.7 173 86.7
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 4.9e-77 292.4 169 85.8
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 7.1e-76 288.5 402 42.5
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 5.1e-74 282.3 364 48.1
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 7.4e-73 278.5 277 55.2
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 1.3e-66 257.7 214 60.7
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 2.1e-64 250.4 306 49.7
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 9.0e-63 245.0 191 70.2
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 1.9e-57 227.3 213 55.9
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.9e-50 203.0 122 84.4
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 8.7e-50 201.8 160 64.4
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 9.7e-49 198.4 122 82.8
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.4e-44 184.5 137 70.1
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 4.6e-43 179.5 307 40.7
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 7.9e-43 178.7 165 59.4
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 5.7e-41 172.6 253 41.9
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.2e-38 164.9 122 72.1
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 1.5e-38 164.5 197 46.2
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 9.4e-36 155.2 135 61.5
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.6e-35 154.5 141 61.0
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 1.8e-31 141.0 176 42.0
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 1.2e-27 128.3 134 53.7
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 2.2e-24 117.5 114 51.8
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.7e-24 116.7 72 79.2
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 1.4e-23 114.8 72 80.6
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 4.1e-23 113.2 410 24.9
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 5.9e-22 109.4 81 69.1
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.5e-17 94.7 77 61.0
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-13 80.9 134 34.3


User provided reference genes

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