Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 3.3e-205 718.8 566 100.0
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 8.8e-182 641.0 501 94.0
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 1.3e-164 583.9 566 85.9
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 2.4e-147 526.6 563 76.0
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 1.2e-143 514.2 566 78.4
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 6.4e-132 475.3 561 79.5
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 8.4e-132 474.9 550 71.3
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 8.7e-121 438.3 567 72.0
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 1.6e-119 434.1 557 70.0
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 9.6e-112 408.3 567 61.9
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 3.8e-108 396.4 563 58.8
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 1.4e-102 377.9 580 62.9
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 5.3e-102 375.9 569 56.4
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 3.4e-101 373.2 561 68.6
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 6.1e-98 362.5 581 60.4
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 6.1e-98 362.5 577 58.4
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.0e-97 361.7 582 57.6
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.1e-96 358.2 547 63.6
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 1.5e-96 357.8 566 50.2
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.2e-93 348.2 555 67.0
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.4e-93 346.7 562 63.2
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 1.7e-92 344.4 562 63.0
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 2.5e-91 340.5 552 54.7
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 4.2e-91 339.7 515 53.0
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 7.2e-91 339.0 470 67.9
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 2.7e-90 337.0 432 56.5
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 1.7e-87 327.8 576 53.0
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 2.2e-87 327.4 472 66.3
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 3.7e-87 326.6 514 57.6
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 6.3e-87 325.9 548 63.7
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 1.4e-86 324.7 582 55.5
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 1.8e-86 324.3 574 61.0
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 2.4e-86 323.9 570 44.2
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 3.1e-86 323.6 516 64.5
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 5.3e-86 322.8 455 61.5
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 9.1e-86 322.0 523 50.1
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 2.0e-85 320.9 562 60.0
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 3.5e-85 320.1 485 51.5
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 7.7e-85 318.9 553 38.7
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 2.2e-84 317.4 581 56.1
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 2.9e-84 317.0 617 48.1
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 5.0e-84 316.2 473 57.3
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 8.5e-84 315.5 574 55.6
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 2.5e-83 313.9 534 45.3
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 2.5e-83 313.9 469 56.1
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 2.7e-82 310.5 469 54.6
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 8.0e-82 308.9 439 53.8
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 1.0e-81 308.5 469 54.4
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 1.0e-81 308.5 531 52.0
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 4.0e-81 306.6 562 53.9
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 8.8e-81 305.4 564 53.5
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 1.2e-80 305.1 602 42.4
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 4.4e-80 303.1 587 57.6
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 7.5e-80 302.4 480 59.2
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 2.8e-79 300.4 535 59.4
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 3.7e-79 300.1 551 50.8
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.4e-78 297.4 562 55.9
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 3.1e-78 297.0 551 58.6
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 9.1e-78 295.4 455 65.3
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 2.0e-77 294.3 506 52.0
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 3.5e-77 293.5 471 61.8
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 4.5e-77 293.1 477 50.3
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 1.0e-76 292.0 515 55.3
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 1.3e-76 291.6 552 54.5
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 1.7e-76 291.2 466 63.7
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 7.2e-75 285.8 531 58.8
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 7.2e-75 285.8 617 45.5
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 4.7e-74 283.1 467 56.3
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 6.1e-74 282.7 523 58.5
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 2.3e-73 280.8 530 58.5
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 2.0e-72 277.7 541 39.2
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 9.8e-72 275.4 570 55.8
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 9.8e-72 275.4 532 57.7
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 1.3e-71 275.0 600 51.7
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 6.3e-71 272.7 529 57.3
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 6.3e-71 272.7 546 57.5
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 8.3e-71 272.3 476 59.5
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 3.1e-70 270.4 578 45.8
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 3.1e-70 270.4 530 57.2
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 5.4e-70 269.6 539 62.5
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 1.0e-68 265.4 529 55.8
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 1.7e-68 264.6 468 63.0
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 5.0e-68 263.1 531 57.3
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 6.5e-68 262.7 531 57.3
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 9.5e-67 258.8 418 67.5
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 1.6e-66 258.1 473 62.6
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 8.8e-65 252.3 463 61.6
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 1.5e-64 251.5 463 44.1
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 5.7e-64 249.6 463 61.3
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 2.2e-63 247.7 465 63.7
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 1.8e-62 244.6 494 34.8
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 1.0e-60 238.8 490 40.4
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 1.5e-59 235.0 425 55.5
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 1.6e-58 231.5 411 47.0
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 6.8e-57 226.1 534 50.4
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 3.4e-56 223.8 322 52.8
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 9.8e-56 222.2 284 62.7
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 2.2e-55 221.1 578 35.5
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 8.3e-55 219.2 129 85.3
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 2.3e-52 211.1 325 54.8
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 7.3e-51 206.1 557 33.9
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 9.5e-43 179.1 573 33.0
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 9.5e-43 179.1 199 49.2
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 2.6e-40 171.0 323 50.5
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 7.5e-40 169.5 411 30.4
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 7.1e-38 162.9 146 55.5
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 3.5e-37 160.6 174 48.3
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 1.5e-32 145.2 211 51.2
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 9.2e-30 136.0 402 49.8
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 2.1e-26 124.8 154 44.8
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 1.8e-25 121.7 201 55.7
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 9.0e-25 119.4 320 31.6
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 8.4e-23 112.8 85 67.1
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 4.2e-22 110.5 83 60.2
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 6.0e-21 106.7 318 48.7
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 4.3e-19 100.5 402 27.9
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 2.6e-16 91.3 140 39.3
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.4e-14 85.5 140 36.4
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 1.4e-14 85.5 52 82.7
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 2.4e-14 84.7 60 66.7
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.2e-14 84.0 142 32.4
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.7e-13 81.3 329 22.2
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 3.0e-12 77.8 100 45.0
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 8.7e-12 76.3 155 37.4
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 3.7e-10 70.9 54 59.3
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.2e-07 61.6 92 73.9
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 3.8e-07 60.8 92 38.0
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 3.8e-07 60.8 31 90.3
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 7.1e-06 56.6 41 58.5


User provided reference genes

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