Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 0.0e+00 1747.6 920 100.0
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 0.0e+00 1593.6 926 89.1
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 0.0e+00 1434.9 927 80.9
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 0.0e+00 1302.7 935 73.4
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 0.0e+00 1301.6 688 99.6
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 0.0e+00 1263.4 931 72.7
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 0.0e+00 1248.8 922 72.0
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 0.0e+00 1245.3 932 72.5
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 0.0e+00 1179.1 951 68.5
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 0.0e+00 1176.4 901 70.9
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 0.0e+00 1099.0 812 72.5
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 5.3e-277 958.0 994 54.7
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 1.2e-276 956.8 989 55.4
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 2.2e-275 952.6 989 55.5
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 2.0e-268 929.5 1049 52.0
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 6.7e-264 914.4 971 54.6
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 6.8e-256 887.9 983 54.2
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 1.6e-252 876.7 953 54.2
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 1.3e-251 873.6 944 53.3
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 2.2e-251 872.8 986 51.6
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 1.6e-249 866.7 926 54.8
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 2.2e-246 856.3 920 54.9
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 1.4e-245 853.6 911 54.0
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 1.2e-244 850.5 964 53.1
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.0e-243 847.4 981 51.9
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 1.7e-243 846.7 950 52.2
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 2.1e-241 839.7 992 52.1
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.0e-240 837.4 992 52.0
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 2.6e-239 832.8 855 54.9
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 3.4e-239 832.4 996 49.7
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 1.7e-238 830.1 872 54.4
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 5.4e-237 825.1 960 51.4
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 1.3e-235 820.5 986 49.6
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 3.3e-234 815.8 964 50.6
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 3.3e-234 815.8 999 49.6
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 5.6e-234 815.1 965 51.1
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 4.7e-233 812.0 971 50.6
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 4.7e-233 812.0 928 51.6
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 8.0e-233 811.2 993 49.3
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 6.8e-232 808.1 989 49.6
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 4.4e-231 805.4 967 49.8
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 5.8e-231 805.1 970 50.1
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 5.8e-231 805.1 929 50.6
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 7.5e-231 804.7 969 51.2
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.1e-229 800.8 994 49.1
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 5.4e-229 798.5 970 50.6
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 2.0e-228 796.6 953 49.9
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 7.8e-228 794.7 967 50.6
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 3.6e-225 785.8 940 49.8
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 4.0e-224 782.3 950 49.7
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 6.8e-224 781.6 912 51.3
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 1.5e-223 780.4 997 48.7
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 1.3e-222 777.3 976 48.8
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 2.9e-222 776.2 1000 47.9
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 8.3e-222 774.6 930 49.7
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 5.4e-221 771.9 916 50.8
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 5.4e-221 771.9 948 48.3
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 7.1e-221 771.5 990 48.2
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 9.2e-221 771.2 911 51.2
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 2.1e-220 770.0 928 49.6
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 1.3e-219 767.3 847 52.8
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 3.9e-219 765.8 871 51.2
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 7.3e-218 761.5 912 50.3
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 1.8e-216 756.9 828 52.8
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 1.8e-216 756.9 969 47.0
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 4.0e-216 755.7 948 49.1
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 5.8e-215 751.9 937 48.8
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 6.0e-212 741.9 880 49.3
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 1.7e-211 740.3 925 49.5
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 5.1e-211 738.8 922 49.1
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 2.5e-210 736.5 928 48.1
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 4.3e-210 735.7 995 47.2
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 3.1e-208 729.6 924 49.6
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 1.5e-207 727.2 932 49.2
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 7.6e-207 724.9 881 49.4
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 9.9e-207 724.5 910 48.2
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 3.8e-206 722.6 910 48.9
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 9.3e-205 718.0 747 55.0
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 4.6e-204 715.7 941 47.2
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 1.5e-202 710.7 933 46.9
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 1.6e-201 707.2 911 47.2
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 6.2e-201 705.3 911 47.0
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 1.4e-200 704.1 861 49.6
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 7.6e-199 698.4 970 45.4
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 2.3e-195 686.8 857 47.4
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 8.7e-195 684.9 867 47.3
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 1.1e-194 684.5 914 46.7
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 2.5e-194 683.3 931 45.3
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 9.0e-192 674.9 721 53.5
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 1.2e-188 664.5 953 46.5
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 3.0e-187 659.8 837 47.9
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 7.6e-183 645.2 993 42.0
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 1.0e-182 644.8 825 47.5
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 2.7e-180 636.7 905 44.6
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 2.5e-170 603.6 694 50.7
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 1.6e-169 600.9 656 52.6
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 5.7e-162 575.9 851 42.4
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 4.5e-159 566.2 619 51.2
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 1.0e-158 565.1 695 49.5
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 6.5e-158 562.4 944 41.7
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 4.7e-156 556.2 643 49.6
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 1.9e-141 507.7 413 66.3
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 5.2e-139 499.6 1011 34.7
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.3e-134 485.0 807 38.9
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 2.7e-132 477.2 813 38.5
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 1.2e-127 461.8 952 33.9
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 2.9e-126 457.2 802 37.4
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 3.8e-126 456.8 885 38.8
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.8e-123 448.0 485 51.1
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 3.6e-92 344.0 1041 28.0
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 1.5e-50 205.7 519 28.5
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 6.7e-46 190.3 375 33.6
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 4.4e-45 187.6 414 29.2
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 1.8e-43 182.2 290 45.5
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 4.4e-29 134.4 128 55.5
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 2.7e-26 125.2 435 25.1
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 1.7e-25 122.5 311 30.5
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.0e-22 113.2 173 46.8
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 3.1e-19 101.7 193 40.9
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.7e-12 79.3 510 20.8
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 8.3e-12 77.0 85 48.2
COL.COLO4_05996 Corchorus olitorius HOM05D006375 ORTHO05D000012 1.2e-10 73.2 109 43.1


User provided reference genes

Program Settings