Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 3.1e-142 508.4 259 100.0
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 3.5e-125 451.8 258 89.5
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 5.2e-121 438.0 258 86.8
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 2.6e-120 435.6 257 86.4
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 7.3e-99 364.4 260 71.5
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 9.9e-96 354.0 259 71.0
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 9.9e-96 354.0 257 71.2
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 6.4e-95 351.3 257 69.6
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 1.2e-93 347.1 257 68.9
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 4.6e-93 345.1 256 69.9
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 3.6e-90 335.5 257 68.5
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.9e-83 313.2 257 61.1
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.1e-78 297.4 255 63.5
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.0e-76 290.8 255 60.0
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.0e-76 290.8 255 60.0
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.3e-76 289.7 255 58.0
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 3.0e-76 289.3 254 60.6
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.9e-76 288.9 233 65.7
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 3.9e-76 288.9 255 60.4
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.1e-75 287.3 259 58.3
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 2.5e-75 286.2 252 58.7
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 3.3e-75 285.8 257 57.6
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 3.3e-75 285.8 254 60.2
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 3.3e-75 285.8 247 61.1
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 7.4e-75 284.6 250 60.4
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.6e-75 284.3 253 61.3
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.6e-74 283.5 257 57.2
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.2e-74 281.6 264 56.8
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 3.1e-73 279.3 248 58.1
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 3.1e-73 279.3 249 58.6
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 4.0e-73 278.9 255 55.7
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 9.0e-73 277.7 262 55.3
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 1.2e-72 277.3 259 56.4
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.2e-72 277.3 248 58.1
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.5e-72 276.9 257 58.4
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 1.5e-72 276.9 257 57.6
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 3.4e-72 275.8 258 56.6
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 3.4e-72 275.8 253 58.5
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 4.5e-72 275.4 282 53.5
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.8e-72 275.0 253 58.5
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 7.6e-72 274.6 253 58.1
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.2e-71 273.1 262 54.6
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 2.9e-71 272.7 247 57.1
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 3.8e-71 272.3 241 59.3
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.9e-71 271.9 253 58.1
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 8.4e-71 271.2 227 62.1
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 1.1e-70 270.8 247 56.3
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.4e-70 270.4 252 56.0
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 1.9e-70 270.0 259 56.4
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.9e-70 270.0 247 57.1
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.2e-69 267.3 279 54.1
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 3.5e-69 265.8 212 60.4
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 3.5e-69 265.8 256 54.3
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 4.6e-69 265.4 257 54.1
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 1.3e-68 263.8 256 52.7
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 6.7e-68 261.5 258 52.3
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.1e-67 260.8 258 51.2
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.5e-67 260.4 239 55.6
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.9e-67 260.0 257 54.1
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.9e-67 260.0 257 54.1
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 5.6e-67 258.5 259 53.7
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 5.6e-67 258.5 214 60.3
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.8e-66 256.1 253 57.3
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 2.8e-66 256.1 233 59.7
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 3.7e-66 255.8 273 50.5
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.4e-65 253.8 230 57.4
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 5.3e-65 251.9 305 47.2
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.2e-64 250.8 226 56.2
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 3.4e-64 249.2 257 53.7
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 5.8e-64 248.4 349 42.1
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 1.3e-63 247.3 229 55.9
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.8e-63 245.7 229 55.9
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 8.4e-63 244.6 265 53.2
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.4e-62 243.8 235 55.3
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 2.5e-62 243.0 245 53.5
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 7.1e-62 241.5 241 52.7
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.6e-61 240.4 243 54.3
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 3.9e-60 235.7 254 51.6
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 5.1e-60 235.3 254 51.2
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 8.7e-60 234.6 285 49.1
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 8.7e-60 234.6 253 50.6
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 4.3e-59 232.3 260 49.6
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 5.7e-59 231.9 254 50.8
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.3e-58 230.7 198 56.6
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.2e-58 229.9 259 50.6
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 2.8e-58 229.6 238 52.1
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.8e-58 229.6 252 50.8
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 2.4e-57 226.5 234 51.3
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 2.6e-56 223.0 243 49.8
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 4.5e-56 222.2 244 49.2
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 2.9e-55 219.5 200 54.5
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 2.9e-55 219.5 200 54.5
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.2e-53 214.2 229 51.5
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 9.7e-51 204.5 180 55.0
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.8e-49 200.3 216 52.3
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 4.5e-48 195.7 440 32.7
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 6.5e-47 191.8 248 44.8
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.1e-45 186.8 261 44.1
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 9.4e-38 161.4 139 54.7
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 8.0e-37 158.3 220 37.7
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 2.8e-34 149.8 158 47.5
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 3.1e-33 146.4 258 40.3
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.1e-29 133.7 98 65.3
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.7e-29 133.3 156 51.3
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 8.8e-28 128.3 252 33.3
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.1e-25 119.8 121 57.9
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 2.0e-24 117.1 258 36.8
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 2.7e-24 116.7 97 55.7
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.7e-18 97.4 136 42.6
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.8e-17 94.0 232 31.5
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 9.1e-17 91.7 226 27.0
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 3.5e-16 89.7 179 34.1
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 2.3e-15 87.0 79 51.9
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 2.9e-15 86.7 98 51.0
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 7.2e-14 82.0 131 37.4
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.4e-12 77.8 92 52.2
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 5.2e-12 75.9 126 43.7
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 5.2e-12 75.9 88 53.4
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 4.1e-09 66.2 86 45.3
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 6.6e-07 58.9 141 27.0


User provided reference genes

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