Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 3.3e-276 954.5 510 100.0
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 1.4e-255 885.9 512 93.6
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 1.9e-255 885.6 512 94.1
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 4.3e-244 847.8 514 87.4
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 8.1e-243 843.6 517 89.2
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 1.1e-236 823.2 515 87.2
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 7.3e-236 820.5 512 87.5
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 4.5e-233 811.2 527 85.4
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 4.5e-233 811.2 527 85.4
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 2.9e-224 781.9 447 83.2
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 1.4e-223 779.6 429 85.5
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 2.1e-222 775.8 425 85.4
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 2.7e-222 775.4 441 82.8
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 1.8e-221 772.7 427 84.5
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 6.7e-221 770.8 425 84.9
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 1.1e-220 770.0 421 84.8
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 1.1e-220 770.0 423 84.2
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 1.9e-220 769.2 428 85.7
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 5.6e-220 767.7 425 84.7
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 7.4e-220 767.3 442 82.4
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 1.3e-219 766.5 428 84.1
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 2.1e-219 765.8 424 84.7
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 6.2e-219 764.2 441 82.5
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 1.4e-218 763.1 465 80.4
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 6.9e-218 760.8 426 86.2
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 2.0e-217 759.2 515 83.1
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 2.0e-217 759.2 425 84.5
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 7.6e-217 757.3 440 82.7
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 7.6e-217 757.3 422 84.8
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 1.0e-216 756.9 439 81.5
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 1.7e-216 756.1 441 81.4
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 2.2e-216 755.7 423 83.9
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 3.8e-216 755.0 433 83.6
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 1.9e-215 752.7 423 83.2
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 1.9e-215 752.7 443 80.6
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 4.2e-215 751.5 426 84.3
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 7.1e-215 750.7 426 83.8
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 7.1e-215 750.7 426 84.5
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 1.6e-214 749.6 441 81.2
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 7.9e-214 747.3 426 83.6
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 1.8e-213 746.1 438 81.3
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 1.8e-213 746.1 421 83.4
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 2.3e-213 745.7 420 82.4
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 3.0e-213 745.3 420 82.9
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 3.9e-213 745.0 420 82.4
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 1.1e-212 743.4 432 82.2
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 2.5e-212 742.3 438 81.3
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 9.6e-212 740.3 423 82.7
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 1.3e-211 740.0 427 81.0
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 1.3e-211 740.0 422 82.5
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 8.2e-211 737.3 431 81.9
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 1.1e-210 736.9 408 84.6
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 4.1e-210 734.9 421 81.0
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 2.0e-209 732.6 425 82.6
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 8.5e-208 727.2 428 81.8
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 6.1e-206 721.1 457 78.1
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 6.3e-203 711.1 418 81.3
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 6.3e-203 711.1 433 80.1
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 8.2e-203 710.7 486 72.0
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 3.1e-202 708.8 425 80.7
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 1.5e-201 706.4 430 78.4
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 3.4e-201 705.3 416 80.5
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 2.2e-200 702.6 431 78.9
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 2.7e-198 695.7 459 73.4
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.4e-197 693.3 426 77.9
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 1.8e-194 682.9 427 77.3
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 3.1e-194 682.2 436 75.5
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 3.1e-194 682.2 427 77.3
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 5.3e-194 681.4 434 76.0
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 1.5e-193 679.9 442 74.4
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 1.5e-193 679.9 391 82.4
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.5e-193 679.9 453 73.3
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 8.5e-192 674.1 437 74.1
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 3.2e-191 672.2 445 73.5
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 2.7e-190 669.1 350 90.0
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 4.7e-190 668.3 439 73.1
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 3.9e-189 665.2 442 72.9
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 2.0e-188 662.9 427 74.5
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 3.3e-188 662.1 437 72.8
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 8.2e-187 657.5 420 75.2
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 8.2e-187 657.5 441 73.0
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 8.2e-187 657.5 444 72.3
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 1.3e-184 650.2 443 71.6
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.3e-184 650.2 388 81.2
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 5.0e-184 648.3 436 72.5
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 3.2e-183 645.6 436 72.2
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 3.2e-183 645.6 422 74.2
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 8.0e-182 641.0 443 71.3
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 8.8e-181 637.5 394 77.2
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.5e-180 636.7 442 70.6
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 1.5e-180 636.7 424 72.9
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 4.4e-180 635.2 315 94.9
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 5.7e-180 634.8 425 71.3
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 7.5e-180 634.4 449 69.9
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 8.2e-179 630.9 425 72.5
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 1.0e-176 624.0 400 75.0
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 2.9e-176 622.5 378 78.0
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 8.5e-176 620.9 423 71.2
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.4e-173 613.6 424 69.8
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 3.7e-171 605.5 388 76.0
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 1.1e-170 604.0 390 74.6
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.4e-170 603.6 427 68.6
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 3.1e-170 602.4 396 73.2
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.9e-168 595.9 441 67.8
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 1.5e-167 593.6 464 65.7
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 6.8e-165 584.7 443 65.9
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 2.0e-161 573.2 343 78.4
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 8.9e-157 557.8 306 83.3
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 1.1e-151 540.8 323 77.7
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 2.3e-141 506.5 339 72.9
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.3e-135 486.1 452 60.2
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 1.6e-134 483.8 311 74.9
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 1.9e-130 470.3 293 75.8
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 1.2e-126 457.6 406 56.9
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 6.4e-123 445.3 447 52.6
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 1.1e-119 434.5 330 65.8
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 1.1e-117 427.9 363 58.7
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 2.6e-116 423.3 329 62.9
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 2.0e-108 397.1 325 56.6
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 7.9e-105 385.2 218 80.3
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 2.9e-99 366.7 191 88.5
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 8.5e-91 338.6 259 66.8
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 1.1e-90 338.2 430 46.3
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 3.9e-88 329.7 230 71.3
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 2.0e-68 264.2 261 55.6
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 2.2e-62 244.2 175 72.0
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 2.4e-53 214.2 112 90.2
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 1.4e-48 198.4 171 63.2
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 8.9e-48 195.7 140 73.6
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 1.3e-38 165.2 108 75.9
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 4.3e-34 150.2 317 33.8
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 7.5e-31 139.4 77 80.5
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 4.9e-30 136.7 270 35.6
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 1.1e-26 125.6 79 77.2
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.4e-23 114.0 80 68.8
Cfa024662 Carpinus fangiana HOM05D005140 ORTHO05D006288 1.4e-21 108.6 320 29.7
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 5.8e-15 86.7 52 73.1
ECA233G4689 Erigeron canadensis HOM05D005140 ORTHO05D006288 3.9e-11 73.9 89 51.7
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 4.8e-09 67.0 29 93.1
BolC1t01095H Brassica oleracea HOM05D005140 ORTHO05D006288 3.4e-07 60.8 71 52.1
Dinv25151 Davidia involucrata HOM05D005140 ORTHO05D006288 4.4e-07 60.5 58 53.4
Psat6g107920 Pisum sativum HOM05D032184 ORTHO05D330502 7.6e-07 59.7 28 89.3
Dinv00162 Davidia involucrata HOM05D005140 ORTHO05D006288 1.7e-06 58.5 82 43.9


User provided reference genes

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