Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 2.2e-310 1068.1 543 100.0
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 9.7e-303 1042.7 543 97.8
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 3.8e-190 668.7 544 64.2
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 4.7e-180 635.2 543 61.9
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 3.6e-148 529.3 600 50.3
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 4.0e-147 525.8 546 52.2
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 1.2e-146 524.2 554 52.2
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 2.8e-140 503.1 543 49.7
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 3.1e-139 499.6 566 49.5
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 4.0e-139 499.2 569 48.5
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 5.2e-139 498.8 562 49.6
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 2.6e-138 496.5 564 49.1
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 1.3e-137 494.2 541 51.4
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.1e-136 491.1 568 49.5
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 3.2e-136 489.6 555 49.0
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 3.2e-136 489.6 546 50.2
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 1.6e-135 487.3 559 47.6
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.6e-135 487.3 560 47.9
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.5e-135 486.1 526 50.8
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 3.0e-134 483.0 548 49.1
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 5.0e-134 482.3 579 47.7
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 8.6e-134 481.5 490 53.7
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 1.9e-133 480.3 543 50.5
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 2.5e-133 479.9 550 50.2
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 3.3e-133 479.6 581 47.7
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 7.3e-133 478.4 542 48.9
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 9.5e-133 478.0 583 47.2
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.2e-132 477.6 587 47.4
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 1.6e-132 477.2 568 47.5
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 1.6e-132 477.2 710 42.5
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 1.1e-131 474.6 558 48.7
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 1.1e-131 474.6 544 50.6
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 2.3e-131 473.4 545 49.9
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 6.8e-131 471.9 545 49.4
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 2.0e-130 470.3 563 46.9
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 2.6e-130 469.9 545 47.7
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 3.4e-130 469.5 550 47.6
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 9.8e-130 468.0 564 47.0
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 4.1e-128 462.6 565 46.7
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 2.7e-127 459.9 582 47.3
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 3.9e-126 456.1 546 46.2
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.6e-125 452.2 579 46.3
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 5.6e-125 452.2 554 45.8
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 8.1e-124 448.4 614 42.0
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 1.7e-121 440.7 559 44.9
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.7e-121 439.5 584 44.9
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 6.4e-121 438.7 536 45.7
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.9e-120 437.2 591 43.7
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 1.2e-119 434.5 526 47.5
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 2.7e-119 433.3 560 45.0
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 2.7e-119 433.3 565 43.4
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 4.6e-119 432.6 557 44.5
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 1.3e-118 431.0 562 43.6
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 8.6e-118 428.3 550 44.7
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 4.3e-117 426.0 573 43.6
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 1.2e-116 424.5 552 45.3
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 2.1e-116 423.7 531 47.1
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 6.2e-116 422.2 666 39.8
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 1.1e-115 421.4 545 44.2
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 5.2e-115 419.1 578 42.9
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 5.2e-115 419.1 472 50.2
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 5.2e-115 419.1 549 43.9
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 1.5e-114 417.5 537 45.3
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 3.4e-114 416.4 547 45.2
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 7.6e-114 415.2 572 43.4
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 9.9e-114 414.8 547 45.3
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 1.3e-113 414.5 591 42.0
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 1.3e-113 414.5 549 43.5
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 2.9e-113 413.3 490 50.2
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 1.4e-112 411.0 523 44.9
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 4.2e-112 409.5 545 42.9
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.2e-111 407.9 551 42.5
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 1.2e-111 407.9 559 44.2
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 1.1e-109 401.4 554 43.3
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.3e-108 397.9 518 45.2
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 2.1e-108 397.1 557 40.9
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 6.2e-108 395.6 548 42.7
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 2.4e-107 393.7 538 44.8
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 2.4e-107 393.7 547 43.0
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 2.0e-106 390.6 481 45.5
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 2.9e-105 386.7 553 43.6
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 8.4e-105 385.2 580 41.9
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 5.4e-104 382.5 553 40.7
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 1.7e-102 377.5 528 42.2
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 5.6e-101 372.5 563 40.3
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 5.6e-101 372.5 516 45.2
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 1.4e-99 367.9 552 40.9
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 3.1e-99 366.7 458 46.1
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 5.3e-99 365.9 495 44.4
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.3e-85 320.1 601 34.8
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 6.3e-84 315.8 399 46.9
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 1.2e-79 301.6 334 46.1
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.7e-76 290.0 405 42.7
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 6.9e-75 285.8 193 69.9
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 1.6e-71 274.6 502 38.8
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.5e-69 268.1 441 39.7
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 3.4e-66 256.9 421 39.7
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 1.0e-65 255.4 473 35.5
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.4e-64 251.5 205 61.0
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 6.1e-63 246.1 475 35.2
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.6e-61 240.7 422 38.6
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 2.6e-58 230.7 542 32.8
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 4.4e-53 213.4 155 66.5
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.8e-52 210.7 155 65.8
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 2.4e-51 207.6 217 49.3
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 5.9e-50 203.0 352 39.5
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 2.7e-47 194.1 601 30.6
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.6e-37 161.0 119 63.0
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 4.4e-37 160.2 137 58.4
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 2.2e-36 157.9 610 27.2
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 7.0e-35 152.9 315 37.1
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 6.6e-33 146.4 121 61.2
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 1.5e-32 145.2 216 45.8
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 2.3e-25 121.3 83 75.9
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.4e-19 100.1 159 35.2
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 5.0e-17 93.6 192 29.7
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.3e-12 79.0 70 57.1
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.2e-10 72.4 65 55.4
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.5e-08 65.5 67 43.3


User provided reference genes

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