Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2571 Papaver somniferum HOM05D006209 ORTHO05D007645 7.4e-78 293.9 157 100.0
PSO063G4271 Papaver somniferum HOM05D006209 ORTHO05D007645 1.4e-65 253.1 139 95.0
PSO357G0693 Papaver somniferum HOM05D006209 ORTHO05D007645 4.6e-64 248.1 139 93.5
PSO700G0237 Papaver somniferum HOM05D006209 ORTHO05D007645 4.6e-64 248.1 139 93.5
PSO063G1215 Papaver somniferum HOM05D006209 ORTHO05D007645 5.7e-62 241.1 133 95.5
PSO754G0074 Papaver somniferum HOM05D006209 ORTHO05D007645 5.7e-62 241.1 133 95.5
PSO357G0046 Papaver somniferum HOM05D006209 ORTHO05D007645 7.4e-62 240.7 138 91.3
Hma1.2p1_0046F.1_g027160 Hydrangea macrophylla HOM05D006209 ORTHO05D007645 1.1e-60 236.9 133 92.5
PSO063G5100 Papaver somniferum HOM05D006209 ORTHO05D007645 1.4e-60 236.5 131 95.4
COL.COLO4_36757 Corchorus olitorius HOM05D006209 ORTHO05D007645 1.8e-60 236.1 133 92.5
Cfa019222 Carpinus fangiana HOM05D006209 ORTHO05D007645 3.1e-60 235.3 133 92.5
Ciclev10020078m.g Citrus clementina HOM05D006209 ORTHO05D007645 3.1e-60 235.3 133 92.5
Dinv38524 Davidia involucrata HOM05D006209 ORTHO05D007645 5.3e-60 234.6 133 91.7
Gohir.D03G109100 Gossypium hirsutum HOM05D006209 ORTHO05D007645 5.3e-60 234.6 133 91.0
Gorai.003G115100 Gossypium raimondii HOM05D006209 ORTHO05D007645 5.3e-60 234.6 133 91.0
Rhsim08G0178000 Rhododendron simsii HOM05D006209 ORTHO05D007645 5.3e-60 234.6 133 91.7
Nn4g22589 Nelumbo nucifera HOM05D006209 ORTHO05D007645 6.9e-60 234.2 133 91.7
vmacro19294 Vaccinium macrocarpon HOM05D006209 ORTHO05D007645 6.9e-60 234.2 133 91.0
Cpa.g.sc159.17 Carica papaya HOM05D006209 ORTHO05D007645 9.0e-60 233.8 133 91.0
Haze_07590 Corylus avellana HOM05D006209 ORTHO05D007645 1.5e-59 233.0 133 91.7
Gohir.A03G057200 Gossypium hirsutum HOM05D006209 ORTHO05D007645 1.5e-59 233.0 133 90.2
Lj5C130T5 Lonicera japonica HOM05D006209 ORTHO05D007645 1.5e-59 233.0 133 91.0
Potri.012G086400 Populus trichocarpa HOM05D006209 ORTHO05D007645 2.0e-59 232.6 133 89.5
Potri.015G084900 Populus trichocarpa HOM05D006209 ORTHO05D007645 2.0e-59 232.6 133 89.5
Prupe.5G165300 Prunus persica HOM05D006209 ORTHO05D007645 2.0e-59 232.6 133 90.2
Aqoxy5G03742 Aquilegia oxysepala HOM05D006209 ORTHO05D007645 2.6e-59 232.3 133 90.2
Lsat_1_v5_gn_4_77340 Lactuca sativa HOM05D006209 ORTHO05D007645 3.4e-59 231.9 132 92.4
Thecc.03G026100 Theobroma cacao HOM05D006209 ORTHO05D007645 3.4e-59 231.9 133 90.2
TAR371G0588 Trochodendron aralioides HOM05D006209 ORTHO05D007645 3.4e-59 231.9 132 92.4
Sabra15G0107900 Salix brachista HOM05D006209 ORTHO05D007645 4.5e-59 231.5 133 88.7
SalBow5G0732 Salvia bowleyana HOM05D006209 ORTHO05D007645 5.9e-59 231.1 133 89.5
SalBow5G2378 Salvia bowleyana HOM05D006209 ORTHO05D007645 5.9e-59 231.1 133 89.5
TWI14G0288 Tripterygium wilfordii HOM05D006209 ORTHO05D007645 5.9e-59 231.1 133 90.2
HanXRQChr10g0296031 Helianthus annuus HOM05D006209 ORTHO05D007645 7.6e-59 230.7 133 88.7
CSS0022134 Camellia sinensis var. sinensis HOM05D006209 ORTHO05D007645 1.0e-58 230.3 133 90.2
Lalb_Chr23g0273351 Lupinus albus HOM05D006209 ORTHO05D007645 1.0e-58 230.3 133 90.2
THA.LOC104800398 Tarenaya hassleriana HOM05D006209 ORTHO05D007645 1.0e-58 230.3 133 89.5
THA.LOC104824986 Tarenaya hassleriana HOM05D006209 ORTHO05D007645 1.0e-58 230.3 133 89.5
TPR.G25676 Trifolium pratense HOM05D006209 ORTHO05D007645 1.0e-58 230.3 132 91.7
DCAR_021592 Daucus carota HOM05D006209 ORTHO05D007645 1.3e-58 229.9 132 89.4
QL10p006868 Quercus lobata HOM05D006209 ORTHO05D007645 1.3e-58 229.9 132 90.9
Phvul.009G173800 Phaseolus vulgaris HOM05D006209 ORTHO05D007645 1.7e-58 229.6 132 90.9
VMungo1309G1487 Vigna mungo HOM05D006209 ORTHO05D007645 1.7e-58 229.6 132 90.9
arahy.Tifrunner.gnm1.ann1.5EQE0P Arachis hypogaea HOM05D006209 ORTHO05D007645 2.2e-58 229.2 133 88.0
arahy.Tifrunner.gnm1.ann1.S747I7 Arachis hypogaea HOM05D006209 ORTHO05D007645 2.2e-58 229.2 133 88.0
MSTRG.11496 Avicennia marina HOM05D006209 ORTHO05D007645 2.2e-58 229.2 133 88.7
BcaC09g50838 Brassica carinata HOM05D006209 ORTHO05D007645 2.2e-58 229.2 133 88.0
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 2.2e-58 229.2 133 88.0
Thhalv10025089m.g Eutrema salsugineum HOM05D006209 ORTHO05D007645 2.2e-58 229.2 133 88.0
Ca_30305_v3 Cicer arietinum L. HOM05D006209 ORTHO05D007645 2.9e-58 228.8 132 90.9
Glyma.06G177400 Glycine max HOM05D006209 ORTHO05D007645 2.9e-58 228.8 132 90.9
MD06G1165600 Malus domestica HOM05D006209 ORTHO05D007645 2.9e-58 228.8 133 88.7
Medtr3g076930 Medicago truncatula HOM05D006209 ORTHO05D007645 2.9e-58 228.8 132 90.9
Psat5g118240 Pisum sativum HOM05D006209 ORTHO05D007645 2.9e-58 228.8 132 90.9
PGR083G0853 Punica granatum HOM05D006209 ORTHO05D007645 2.9e-58 228.8 133 88.7
GSVIVG01007643001 Vitis vinifera HOM05D006209 ORTHO05D007645 2.9e-58 228.8 133 88.7
Carub.0007s1635 Capsella rubella HOM05D006209 ORTHO05D007645 3.8e-58 228.4 133 88.0
CAN.G648.11 Capsicum annuum HOM05D006209 ORTHO05D007645 3.8e-58 228.4 132 90.2
CDE09G0716 Ceratophyllum demersum HOM05D006209 ORTHO05D007645 3.8e-58 228.4 132 90.2
AUR62028724 Chenopodium quinoa HOM05D006209 ORTHO05D007645 3.8e-58 228.4 132 88.6
Eucgr.B00217 Eucalyptus grandis HOM05D006209 ORTHO05D007645 3.8e-58 228.4 133 86.5
CiPaw.11G019400 Carya illinoinensis HOM05D006209 ORTHO05D007645 5.0e-58 228.0 132 90.9
ECA232G4716 Erigeron canadensis HOM05D006209 ORTHO05D007645 5.0e-58 228.0 132 89.4
Glyma.04G188400 Glycine max HOM05D006209 ORTHO05D007645 5.0e-58 228.0 132 90.2
SGA_v2.0_scaffold25G10798 Striga asiatica HOM05D006209 ORTHO05D007645 5.0e-58 228.0 133 88.0
Zm00001eb424890 Zea mays HOM05D006209 ORTHO05D007645 5.0e-58 228.0 133 88.7
Migut.O00160 Erythranthe guttata HOM05D006209 ORTHO05D007645 6.5e-58 227.6 133 87.2
Sp7g22690 Schrenkiella parvula HOM05D006209 ORTHO05D007645 6.5e-58 227.6 133 87.2
Cc04_g11480 Coffea canephora HOM05D006209 ORTHO05D007645 8.5e-58 227.3 133 88.7
Os04g0479000 Oryza sativa ssp. japonica HOM05D006209 ORTHO05D007645 8.5e-58 227.3 133 88.0
CARHR232090 Cardamine hirsuta HOM05D006209 ORTHO05D007645 1.1e-57 226.9 133 87.2
Nitab4.5_0000025g0360 Nicotiana tabacum HOM05D006209 ORTHO05D007645 1.1e-57 226.9 132 89.4
Nitab4.5_0001566g0050 Nicotiana tabacum HOM05D006209 ORTHO05D007645 1.1e-57 226.9 132 89.4
AUR62008142 Chenopodium quinoa HOM05D006209 ORTHO05D007645 1.4e-57 226.5 132 87.9
MBI06_g16065_MAGBIO Magnolia biondii HOM05D006209 ORTHO05D007645 1.4e-57 226.5 132 89.4
FvH4_5g06320 Fragaria vesca HOM05D006209 ORTHO05D007645 1.9e-57 226.1 132 88.6
FAN18G2337 Fragaria x ananassa HOM05D006209 ORTHO05D007645 1.9e-57 226.1 132 88.6
RcHm_v2.0_Chr7g0192541 Rosa chinensis HOM05D006209 ORTHO05D007645 1.9e-57 226.1 132 89.4
Sc12g0004970 Simmondsia chinensis HOM05D006209 ORTHO05D007645 3.2e-57 225.3 132 87.1
ClCG03G003010 Citrullus lanatus HOM05D006209 ORTHO05D007645 4.2e-57 224.9 131 88.5
MELO3C002299.2 Cucumis melo HOM05D006209 ORTHO05D007645 4.2e-57 224.9 131 88.5
CsaV3_1G008850 Cucumis sativus L. HOM05D006209 ORTHO05D007645 4.2e-57 224.9 131 88.5
MD14G1171200 Malus domestica HOM05D006209 ORTHO05D007645 4.2e-57 224.9 133 87.2
Sed0008195 Sechium edule HOM05D006209 ORTHO05D007645 4.2e-57 224.9 131 88.5
BcaNung07359 Brassica carinata HOM05D006209 ORTHO05D007645 5.5e-57 224.6 134 87.3
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 5.5e-57 224.6 134 87.3
BraA01t01539Z Brassica rapa HOM05D006209 ORTHO05D007645 5.5e-57 224.6 134 87.3
Aa31LG4G9900 Aethionema arabicum HOM05D006209 ORTHO05D007645 7.2e-57 224.2 132 87.9
CANSAT80G1924 Cannabis sativa HOM05D006209 ORTHO05D007645 7.2e-57 224.2 132 87.9
Hund02788 Selenicereus undatus HOM05D006209 ORTHO05D007645 7.2e-57 224.2 132 87.1
Sopen12g027590 Solanum pennellii HOM05D006209 ORTHO05D007645 1.2e-56 223.4 132 87.9
EL10Ac5g10654 Beta vulgaris HOM05D006209 ORTHO05D007645 1.6e-56 223.0 132 87.1
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 4.6e-56 221.5 142 82.4
SHI17264 Sapria himalayana HOM05D006209 ORTHO05D007645 7.9e-56 220.7 132 84.1
ATR0824G215 Amborella trichopoda HOM05D006209 ORTHO05D007645 1.0e-55 220.3 132 85.6
HPP92_008110 Vanilla planifolia HOM05D006209 ORTHO05D007645 2.3e-55 219.2 133 83.5
Ah.11g051190 Amaranthus hybridus HOM05D006209 ORTHO05D007645 3.9e-55 218.4 132 84.8
SMO340G0102 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 4.8e-53 211.5 131 81.7
FAN08G2144 Fragaria x ananassa HOM05D006209 ORTHO05D007645 1.4e-52 209.9 138 81.2
FAN13G2576 Fragaria x ananassa HOM05D006209 ORTHO05D007645 5.9e-51 204.5 138 79.0
Mapoly0084s0055 Marchantia polymorpha HOM05D006209 ORTHO05D007645 5.9e-51 204.5 131 78.6
Oeu040860.1 Olea europaea HOM05D006209 ORTHO05D007645 4.2e-49 198.4 203 58.6
CBR_g39421 Chara braunii HOM05D006209 ORTHO05D007645 1.6e-48 196.4 131 75.6
Cre02.g117150 Chlamydomonas reinhardtii HOM05D006209 ORTHO05D007645 2.2e-45 186.0 130 73.1
MCO05G067 Micromonas commoda HOM05D006209 ORTHO05D007645 1.8e-44 183.0 131 71.0
unitig_26.g8808 Utricularia gibba HOM05D000111 ORTHO05D007645 1.8e-44 183.0 110 88.2
AT4G24710 Arabidopsis thaliana HOM05D006209 ORTHO05D007645 6.1e-40 167.9 103 86.4
Manes.06G110500 Manihot esculenta HOM05D006209 ORTHO05D007645 7.9e-40 167.5 101 88.1
Atru.chr9.2581 Acer truncatum HOM05D006209 ORTHO05D007645 3.0e-39 165.6 98 89.8
Lj1g0021386 Lotus japonicus HOM05D006209 ORTHO05D007645 3.0e-39 165.6 99 87.9
Ca_16138_v3 Cicer arietinum L. HOM05D006209 ORTHO05D007645 3.9e-39 165.2 98 90.8
arahy.Tifrunner.gnm1.ann1.3TKR16 Arachis hypogaea HOM05D006209 ORTHO05D007645 4.4e-30 135.2 104 72.1
HPP92_008121 Vanilla planifolia HOM05D006209 ORTHO05D007645 4.1e-28 128.6 114 64.0
arahy.Tifrunner.gnm1.ann1.YY50VQ Arachis hypogaea HOM05D006209 ORTHO05D007645 1.3e-26 123.6 116 61.2
HanXRQChr03g0075641 Helianthus annuus HOM05D006209 ORTHO05D007645 1.1e-20 104.0 64 82.8
arahy.Tifrunner.gnm1.ann1.32D49K Arachis hypogaea HOM05D006209 ORTHO05D007645 1.1e-17 94.0 76 71.1
Ca_07963_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 1.6e-16 90.1 57 87.7
PRCOL_00006353 Prasinoderma coloniale HOM05D006209 ORTHO05D007645 2.1e-16 89.7 131 36.6
Solyc12g076320.2 Solanum lycopersicum HOM05D006209 ORTHO05D007645 2.9e-10 69.3 40 80.0
Peaxi162Scf00801g00216 Petunia axillaris HOM05D006209 ORTHO05D007645 3.3e-09 65.9 33 90.9
Zm00001eb124730 Zea mays HOM05D000147 ORTHO05D002466 1.4e-07 60.5 141 31.2
VMungo1383G0846 Vigna mungo HOM05D000070 ORTHO05D007358 2.3e-07 59.7 147 32.7
Lalb_Chr14g0365611 Lupinus albus HOM05D000070 ORTHO05D007358 3.0e-07 59.3 147 32.7
Phvul.001G119600 Phaseolus vulgaris HOM05D000070 ORTHO05D007358 4.0e-07 58.9 147 32.7
Pp3c6_25280 Physcomitrium patens HOM05D000070 ORTHO05D007358 5.2e-07 58.5 141 34.0
Hund20873 Selenicereus undatus HOM05D000147 ORTHO05D002466 5.2e-07 58.5 141 31.9
Zm00001eb335640 Zea mays HOM05D000147 ORTHO05D002466 5.2e-07 58.5 141 30.5
Lsat_1_v5_gn_7_62300 Lactuca sativa HOM05D000070 ORTHO05D007358 6.8e-07 58.2 147 32.0
Prupe.3G062600 Prunus persica HOM05D000070 ORTHO05D007358 6.8e-07 58.2 147 31.3
Glyma.03G123500 Glycine max HOM05D000070 ORTHO05D007358 8.9e-07 57.8 147 32.0
Lj1g0014852 Lotus japonicus HOM05D000070 ORTHO05D006344 8.9e-07 57.8 118 34.7
Pp3c1_1310 Physcomitrium patens HOM05D000147 ORTHO05D002466 8.9e-07 57.8 141 31.2
CiPaw.09G050300 Carya illinoinensis HOM05D000070 ORTHO05D007358 1.2e-06 57.4 147 31.3
Ciclev10013654m.g Citrus clementina HOM05D000070 ORTHO05D007358 1.2e-06 57.4 147 31.3
ECA248G2711 Erigeron canadensis HOM05D000070 ORTHO05D007358 1.2e-06 57.4 141 32.6
Lj1C1085G1 Lonicera japonica HOM05D000070 ORTHO05D007358 1.2e-06 57.4 161 29.8
arahy.Tifrunner.gnm1.ann1.GDL09X Arachis hypogaea HOM05D000070 ORTHO05D007358 1.5e-06 57.0 147 31.3
arahy.Tifrunner.gnm1.ann1.YU3HKG Arachis hypogaea HOM05D000070 ORTHO05D007358 1.5e-06 57.0 147 31.3
ClCG09G015840 Citrullus lanatus HOM05D000070 ORTHO05D007358 1.5e-06 57.0 141 32.6
SMO147G0250 Selaginella moellendorffii HOM05D000147 ORTHO05D002466 1.5e-06 57.0 141 29.1
FvH4_6g32040 Fragaria vesca HOM05D000070 ORTHO05D007358 2.0e-06 56.6 141 31.2
FAN14G4524 Fragaria x ananassa HOM05D000070 ORTHO05D007358 2.0e-06 56.6 141 31.2
Manes.08G062100 Manihot esculenta HOM05D000070 ORTHO05D007358 2.0e-06 56.6 123 35.0
Mapoly0064s0038 Marchantia polymorpha HOM05D000147 ORTHO05D002466 2.0e-06 56.6 141 31.2
Atru.chr12.1313 Acer truncatum HOM05D000070 ORTHO05D007358 2.6e-06 56.2 147 30.6
COL.COLO4_16973 Corchorus olitorius HOM05D000070 ORTHO05D007358 2.6e-06 56.2 147 29.9
Migut.D02352 Erythranthe guttata HOM05D000147 ORTHO05D002466 2.6e-06 56.2 141 30.5
HanXRQChr13g0406801 Helianthus annuus HOM05D000070 ORTHO05D007358 2.6e-06 56.2 141 31.9
MD09G1206200 Malus domestica HOM05D000070 ORTHO05D007358 2.6e-06 56.2 147 30.6
Medtr7g088850 Medicago truncatula HOM05D000070 ORTHO05D006344 2.6e-06 56.2 125 29.6
FAN09G2492 Fragaria x ananassa HOM05D000070 ORTHO05D007358 3.4e-06 55.8 141 31.2
Hma1.2p1_1022F.1_g248730 Hydrangea macrophylla HOM05D000070 ORTHO05D007358 3.4e-06 55.8 161 30.4
Hma1.2p1_1022F.1_g248740 Hydrangea macrophylla HOM05D000070 ORTHO05D007358 3.4e-06 55.8 161 30.4
Hma1.2p1_1423F.1_g282620 Hydrangea macrophylla HOM05D000070 ORTHO05D007358 3.4e-06 55.8 161 30.4
Os01g0141300 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D002466 3.4e-06 55.8 141 30.5
Pp3c2_35940 Physcomitrium patens HOM05D000147 ORTHO05D002466 3.4e-06 55.8 141 30.5
QL04p086095 Quercus lobata HOM05D000147 ORTHO05D002466 3.4e-06 55.8 148 31.8
EL10Ac3g07273 Beta vulgaris HOM05D000070 ORTHO05D007358 4.4e-06 55.5 147 30.6
Sp2g14350 Schrenkiella parvula HOM05D000070 ORTHO05D006344 4.4e-06 55.5 118 31.4
Thecc.03G306800 Theobroma cacao HOM05D000070 ORTHO05D007358 4.4e-06 55.5 147 29.9
MSTRG.6311 Avicennia marina HOM05D000070 ORTHO05D007358 5.8e-06 55.1 147 29.3
Ca_08370_v3 Cicer arietinum L. HOM05D000070 ORTHO05D007358 5.8e-06 55.1 139 32.4
Cc06_g20150 Coffea canephora HOM05D000070 ORTHO05D007358 5.8e-06 55.1 147 29.9
Dinv20768 Davidia involucrata HOM05D000070 ORTHO05D007358 5.8e-06 55.1 161 29.8
Medtr7g088830 Medicago truncatula HOM05D000070 ORTHO05D007358 5.8e-06 55.1 141 31.2
Potri.006G035000 Populus trichocarpa HOM05D000070 ORTHO05D007358 5.8e-06 55.1 141 31.2
THA.LOC104800540 Tarenaya hassleriana HOM05D000147 ORTHO05D002466 5.8e-06 55.1 141 30.5
Actinidia29575 Actinidia chinensis HOM05D000070 ORTHO05D007358 7.5e-06 54.7 161 29.2
CSS0017562 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D007358 7.5e-06 54.7 161 29.2
Gohir.A08G154900 Gossypium hirsutum HOM05D000070 ORTHO05D007358 7.5e-06 54.7 141 31.9
Lsat_1_v5_gn_4_11741 Lactuca sativa HOM05D000070 ORTHO05D006344 7.5e-06 54.7 118 33.9
Sabra01G0099000 Salix brachista HOM05D000070 ORTHO05D006344 7.5e-06 54.7 129 33.3
Cpa.g.sc5.154 Carica papaya HOM05D000070 ORTHO05D007358 9.8e-06 54.3 147 29.3
Duzib084G0952 Durio zibethinus HOM05D000070 ORTHO05D007358 9.8e-06 54.3 147 29.9
Migut.J01627 Erythranthe guttata HOM05D000070 ORTHO05D007358 9.8e-06 54.3 161 28.6
QL07p012633 Quercus lobata HOM05D000070 ORTHO05D007358 9.8e-06 54.3 147 29.9
Sabra06G0023400 Salix brachista HOM05D000070 ORTHO05D007358 9.8e-06 54.3 141 31.2
SEGI_18738 Sequoiadendron giganteum HOM05D000070 ORTHO05D000722 9.8e-06 54.3 144 29.9
TAR636G1288 Trochodendron aralioides HOM05D000070 ORTHO05D007358 9.8e-06 54.3 141 30.5


User provided reference genes

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