Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 2.4e-266 921.8 515 100.0
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 2.0e-265 918.7 515 99.8
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 8.3e-203 710.7 432 80.1
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 1.8e-202 709.5 430 80.2
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 5.4e-202 708.0 432 79.9
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 2.0e-201 706.1 431 79.6
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 6.6e-200 701.0 426 80.3
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 1.5e-199 699.9 439 77.0
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 4.2e-199 698.4 442 79.0
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 4.2e-199 698.4 438 77.9
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 5.5e-199 698.0 437 79.6
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 9.5e-199 697.2 426 80.3
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 2.1e-198 696.0 443 78.3
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 2.8e-198 695.7 433 78.5
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 2.3e-197 692.6 427 78.7
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.3e-197 692.6 444 78.6
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 3.0e-197 692.2 439 78.6
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 4.0e-197 691.8 439 78.1
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 5.2e-197 691.4 432 79.9
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 8.9e-197 690.6 425 79.3
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 1.5e-196 689.9 430 78.8
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.5e-196 689.9 432 79.9
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 2.6e-196 689.1 422 79.6
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 5.7e-196 688.0 428 79.4
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 7.5e-196 687.6 428 78.5
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 9.8e-196 687.2 433 77.4
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.2e-195 686.0 430 80.0
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 2.2e-195 686.0 441 77.8
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 4.9e-195 684.9 441 77.8
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 6.3e-195 684.5 433 77.1
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 6.3e-195 684.5 433 77.1
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 8.3e-195 684.1 428 79.2
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 4.1e-194 681.8 430 77.2
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 5.4e-194 681.4 425 78.1
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 1.6e-193 679.9 427 77.8
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 2.0e-193 679.5 440 76.4
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 4.5e-193 678.3 432 77.5
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 7.8e-193 677.6 427 77.3
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 7.8e-193 677.6 422 79.1
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 1.0e-192 677.2 425 77.9
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 1.3e-192 676.8 421 79.1
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 2.3e-192 676.0 460 74.6
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 3.8e-192 675.2 427 77.3
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 3.8e-192 675.2 421 79.1
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 6.6e-192 674.5 425 78.4
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 1.1e-191 673.7 419 78.3
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 2.5e-191 672.5 432 77.8
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 2.5e-191 672.5 422 78.0
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 2.1e-190 669.5 473 71.7
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 2.1e-190 669.5 440 76.6
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 6.1e-190 667.9 444 75.2
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 1.8e-189 666.4 440 75.0
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 5.2e-189 664.8 442 75.3
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 1.5e-188 663.3 423 77.1
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 2.4e-186 656.0 426 77.0
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 3.2e-186 655.6 439 76.5
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 3.2e-186 655.6 427 75.9
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 4.1e-186 655.2 423 74.9
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 9.2e-186 654.1 440 72.7
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.2e-185 653.7 428 75.9
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 1.2e-185 653.7 427 74.5
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 3.9e-184 648.7 481 69.9
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 6.6e-184 647.9 446 73.5
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 3.3e-183 645.6 439 73.6
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 4.7e-182 641.7 471 69.4
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 8.0e-182 641.0 421 76.2
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 1.1e-181 640.6 427 72.6
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 3.1e-181 639.0 427 74.7
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 5.2e-181 638.3 412 76.9
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 3.4e-180 635.6 426 74.6
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 7.5e-180 634.4 350 85.7
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 2.2e-179 632.9 422 72.0
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 2.2e-179 632.9 434 72.4
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 8.3e-179 630.9 429 72.3
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 1.9e-178 629.8 423 74.2
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 1.6e-177 626.7 425 71.5
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 2.7e-177 625.9 420 72.9
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 4.6e-177 625.2 441 70.3
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 3.0e-176 622.5 427 71.7
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 8.6e-176 620.9 453 70.4
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 5.6e-175 618.2 431 70.5
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 1.2e-174 617.1 439 69.9
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 1.6e-174 616.7 420 72.6
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 2.8e-174 615.9 426 71.1
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 8.1e-174 614.4 439 69.7
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.1e-173 614.0 438 71.0
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 3.4e-172 609.0 390 76.7
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 7.5e-172 607.8 428 71.5
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 7.5e-172 607.8 379 78.1
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 9.9e-172 607.4 428 70.8
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.9e-171 605.9 431 70.5
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 6.4e-171 604.7 440 68.4
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 4.6e-169 598.6 433 68.8
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 3.9e-168 595.5 428 69.2
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.5e-167 592.8 394 76.4
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 6.2e-166 588.2 432 69.4
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 1.2e-164 583.9 391 72.4
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 4.4e-164 582.0 400 72.2
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.2e-161 573.9 437 67.3
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 1.7e-160 570.1 401 69.3
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 3.3e-159 565.8 423 67.1
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 3.6e-158 562.4 427 65.8
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 6.9e-157 558.1 388 72.4
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 3.4e-156 555.8 306 83.7
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 5.4e-154 548.5 316 82.3
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 1.6e-150 537.0 452 64.8
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 1.6e-150 537.0 376 73.1
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 1.8e-144 516.9 359 71.6
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 2.3e-136 490.0 293 78.8
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 2.5e-135 486.5 326 73.9
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 1.6e-129 467.2 342 71.3
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 2.0e-124 450.3 312 72.4
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 5.9e-124 448.7 437 54.7
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 8.8e-120 434.9 453 51.9
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.3e-119 433.0 451 55.7
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 2.2e-118 430.3 355 60.3
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 4.7e-113 412.5 311 63.3
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 2.0e-108 397.1 334 62.0
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 2.5e-106 390.2 218 80.7
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 4.7e-105 386.0 326 54.6
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 4.5e-100 369.4 191 88.0
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 1.2e-87 328.2 402 47.5
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 2.9e-83 313.5 228 70.2
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 4.2e-82 309.7 260 61.5
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 6.6e-51 206.1 172 65.1
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 9.6e-50 202.2 263 50.2
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 8.1e-49 199.1 112 83.0
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 1.5e-47 194.9 136 72.8
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 3.3e-34 150.6 316 32.0
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 5.8e-31 139.8 133 64.7
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 6.7e-27 126.3 78 76.9
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 1.5e-26 125.2 76 77.6
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 6.2e-25 119.8 270 32.6
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 4.0e-24 117.1 109 62.4
Cfa024662 Carpinus fangiana HOM05D005140 ORTHO05D006288 1.0e-22 112.5 320 29.4
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.3e-19 102.1 81 60.5
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 2.0e-15 88.2 52 75.0
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 3.7e-09 67.4 29 93.1


User provided reference genes

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