Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 0.0e+00 1242.3 624 100.0
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 1.8e-236 822.8 627 69.5
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 1.3e-205 720.3 628 62.3
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 1.1e-204 717.2 627 62.4
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.1e-196 690.6 679 57.6
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 1.8e-196 689.9 683 56.8
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 5.5e-193 678.3 682 54.7
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 4.4e-190 668.7 685 54.3
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 1.7e-189 666.8 683 54.5
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 1.1e-188 664.1 666 53.8
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 2.0e-187 659.8 675 54.2
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 2.0e-187 659.8 673 53.9
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 1.0e-186 657.5 682 52.9
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 5.0e-186 655.2 640 54.8
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 3.6e-184 649.0 639 54.9
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 2.6e-182 642.9 642 54.8
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 8.3e-181 637.9 659 53.4
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 1.4e-180 637.1 685 51.4
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 9.1e-180 634.4 654 54.3
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.2e-179 634.0 681 51.8
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 3.5e-179 632.5 662 53.8
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 7.7e-179 631.3 641 53.5
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 7.7e-179 631.3 671 53.1
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 1.0e-178 630.9 664 53.0
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 2.9e-178 629.4 665 52.6
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 2.9e-178 629.4 669 52.9
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 2.9e-178 629.4 657 53.6
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 1.1e-177 627.5 660 53.8
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 9.4e-177 624.4 663 52.6
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 8.0e-176 621.3 654 52.0
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 1.0e-175 620.9 692 51.3
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 1.4e-175 620.5 669 52.2
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 8.8e-175 617.8 678 51.8
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 9.8e-174 614.4 678 51.2
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 2.4e-172 609.8 680 51.9
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 7.7e-171 604.7 706 49.6
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 1.3e-170 604.0 719 49.0
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 5.0e-170 602.1 665 50.2
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 5.0e-170 602.1 699 49.9
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.1e-169 600.9 687 49.3
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.9e-169 600.1 674 50.6
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 2.5e-169 599.7 663 50.8
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 4.2e-169 599.0 674 51.0
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 2.1e-168 596.7 671 51.9
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 6.8e-167 591.7 664 49.7
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 8.9e-167 591.3 667 50.8
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 7.5e-166 588.2 674 49.7
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 2.2e-165 586.6 732 46.2
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 4.9e-165 585.5 604 54.1
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 1.8e-164 583.6 668 49.1
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 2.4e-164 583.2 852 44.1
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 4.1e-164 582.4 664 49.7
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 9.2e-164 581.3 643 51.6
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 4.5e-163 578.9 643 51.2
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 5.9e-163 578.6 681 51.0
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 2.9e-162 576.2 685 49.9
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 1.1e-161 574.3 666 48.2
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 2.5e-161 573.2 646 50.6
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 2.5e-161 573.2 646 50.6
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 2.5e-161 573.2 646 50.6
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 5.6e-161 572.0 660 50.5
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 7.3e-161 571.6 640 50.8
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 8.0e-160 568.2 664 48.5
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 1.0e-159 567.8 733 46.4
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 3.1e-159 566.2 668 49.6
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 2.0e-158 563.5 630 50.8
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 5.8e-158 562.0 636 50.5
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 3.7e-157 559.3 673 48.0
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 1.1e-156 557.8 668 48.5
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 3.2e-156 556.2 600 53.5
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 5.0e-154 548.9 643 49.6
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 3.1e-151 539.7 620 50.2
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 3.1e-151 539.7 636 49.2
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 4.0e-151 539.3 618 48.5
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 2.6e-150 536.6 625 48.3
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.4e-148 530.8 543 53.8
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 3.2e-148 529.6 656 46.0
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 7.8e-147 525.0 637 47.9
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 6.6e-146 521.9 606 51.5
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.9e-145 520.4 605 51.6
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 5.6e-145 518.8 620 48.2
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 8.1e-144 515.0 623 47.5
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 3.1e-143 513.1 659 44.9
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 4.4e-142 509.2 618 48.4
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 3.5e-139 499.6 594 51.0
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.8e-135 487.3 573 51.1
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 2.0e-134 483.8 530 52.6
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 1.6e-123 447.6 655 44.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 2.7e-123 446.8 624 43.4
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 4.6e-123 446.0 547 47.9
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 9.6e-121 438.3 660 40.9
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 4.8e-120 436.0 649 39.4
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 2.7e-115 420.2 517 48.2
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 5.1e-114 416.0 622 39.2
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 7.4e-113 412.1 599 43.9
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 7.4e-113 412.1 476 49.2
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 1.0e-109 401.7 492 48.2
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 6.2e-104 382.5 507 46.2
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 2.1e-99 367.5 543 41.8
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 5.1e-90 336.3 222 74.3
unitig_744.g24021 Utricularia gibba HOM05D004944 ORTHO05D005989 3.8e-85 320.1 749 34.2
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 3.0e-82 310.5 254 61.0
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 1.4e-79 301.6 469 42.4
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 3.1e-79 300.4 623 34.3
Psat5g213680 Pisum sativum HOM05D004944 ORTHO05D005989 1.4e-74 285.0 453 40.8
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 2.8e-72 277.3 915 26.8
vmacro13722 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 8.5e-69 265.8 213 62.4
Sc10g0004230 Simmondsia chinensis HOM05D004944 ORTHO05D005989 1.4e-66 258.5 447 37.1
FAN10G4268 Fragaria x ananassa HOM05D004944 ORTHO05D005989 8.3e-64 249.2 211 61.1
Peaxi162Scf00309g00015 Petunia axillaris HOM05D004944 ORTHO05D005989 4.5e-62 243.4 271 48.7
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 7.2e-60 236.1 172 68.0
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 9.2e-55 219.2 167 63.5
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 4.5e-54 216.9 164 65.2
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 3.0e-50 204.1 146 69.2
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 9.8e-49 199.1 135 71.9
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 1.4e-47 195.3 166 61.4
AUR62002442 Chenopodium quinoa HOM05D004944 ORTHO05D005989 5.0e-45 186.8 171 53.8
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 1.5e-41 175.3 167 57.5
HPP92_001442 Vanilla planifolia HOM05D004944 ORTHO05D005989 7.5e-41 172.9 143 60.1
FAN01G1245 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.3e-40 172.2 152 59.2
Prupe.2G032400 Prunus persica HOM05D004944 ORTHO05D005989 1.4e-39 168.7 175 50.3
CSS0031841 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.9e-39 168.3 174 56.3
Ca_04546_v3 Cicer arietinum L. HOM05D004944 ORTHO05D005989 7.0e-39 166.4 299 36.8
Lj9A645G78 Lonicera japonica HOM05D004944 ORTHO05D005989 9.2e-39 166.0 303 41.3
ATR0721G017 Amborella trichopoda HOM05D004944 ORTHO05D005989 1.7e-37 161.8 337 35.0
CSS0009317 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 6.8e-34 149.8 146 54.1
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.2e-33 149.1 104 68.3
Lj9A645G77 Lonicera japonica HOM05D004944 ORTHO05D005989 2.4e-31 141.4 118 55.9
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 3.5e-30 137.5 253 33.2
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 3.0e-29 134.4 324 30.6
Sp5g22360 Schrenkiella parvula HOM05D004944 ORTHO05D005989 7.3e-28 129.8 144 49.3
Oeu006103.1 Olea europaea HOM05D004944 ORTHO05D005989 1.1e-26 125.9 145 50.3
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 3.7e-24 117.5 252 29.0
SHI03969 Sapria himalayana HOM05D004944 ORTHO05D005989 1.5e-20 105.5 119 50.4
CSS0024385 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 7.3e-20 103.2 91 59.3
RcHm_v2.0_Chr4g0391951 Rosa chinensis HOM05D004944 ORTHO05D005989 1.2e-19 102.4 101 51.5
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 4.0e-18 97.4 183 35.5
Psat5g213600 Pisum sativum HOM05D004944 ORTHO05D005989 1.5e-17 95.5 147 38.8
Prupe.2G099800 Prunus persica HOM05D004944 ORTHO05D005989 2.6e-17 94.7 235 34.5
Lj9A645G79 Lonicera japonica HOM05D004944 ORTHO05D005989 4.9e-16 90.5 55 72.7
SHI03976 Sapria himalayana HOM05D004944 ORTHO05D005989 4.2e-15 87.4 55 69.1
Peaxi162Scf00309g00011 Petunia axillaris HOM05D004944 ORTHO05D005989 9.3e-15 86.3 53 77.4
SHI03965 Sapria himalayana HOM05D004944 ORTHO05D005989 8.1e-11 73.2 60 51.7
Lalb_Chr04g0263911 Lupinus albus HOM05D004944 ORTHO05D005989 2.4e-10 71.6 84 40.5
SHI03974 Sapria himalayana HOM05D004944 ORTHO05D005989 7.1e-07 60.1 60 56.7


User provided reference genes

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