Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 2890.5 1471 100.0
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 2841.2 1469 98.4
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 0.0e+00 2150.2 1493 73.5
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 2130.1 1488 74.5
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 0.0e+00 2129.4 1493 73.3
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 0.0e+00 2126.7 1494 72.9
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 2124.0 1496 73.1
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 0.0e+00 2122.4 1493 72.3
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 2116.3 1494 72.7
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 0.0e+00 2115.5 1494 72.7
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 0.0e+00 2112.8 1493 73.3
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 0.0e+00 2107.0 1493 71.9
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 0.0e+00 2105.9 1496 72.4
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 2105.5 1488 73.8
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 0.0e+00 2103.6 1497 72.3
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 0.0e+00 2098.6 1492 72.1
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2092.4 1493 72.5
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 0.0e+00 2090.5 1444 74.6
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 0.0e+00 2086.2 1494 71.2
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 0.0e+00 2071.6 1495 71.0
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 2063.1 1492 70.6
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2058.1 1481 71.9
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 2056.2 1488 70.6
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 0.0e+00 2053.1 1491 70.6
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 2047.7 1493 70.8
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 2047.7 1492 70.1
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 0.0e+00 2043.9 1489 70.3
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 2040.4 1493 69.9
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 0.0e+00 2040.4 1491 70.0
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 0.0e+00 2038.8 1494 71.0
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 0.0e+00 2036.9 1530 68.6
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 0.0e+00 2033.5 1493 69.7
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 0.0e+00 2032.7 1549 68.6
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 0.0e+00 2032.3 1491 69.4
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 2028.1 1492 69.6
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2026.9 1492 69.6
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 2023.8 1492 68.9
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 0.0e+00 2023.8 1488 70.2
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 0.0e+00 2023.1 1492 69.2
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 0.0e+00 2022.7 1492 68.6
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 0.0e+00 2021.9 1490 70.3
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 0.0e+00 2021.5 1494 69.7
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 0.0e+00 2020.7 1528 68.6
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2019.2 1492 69.2
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 2014.6 1490 69.2
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2014.6 1495 69.0
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 0.0e+00 2014.6 1491 69.1
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2013.8 1492 69.0
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2012.3 1489 69.2
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 0.0e+00 2008.4 1495 68.9
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 2000.3 1489 69.0
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 1996.1 1495 68.8
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 0.0e+00 1993.0 1489 68.8
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 0.0e+00 1990.7 1489 68.6
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 0.0e+00 1989.9 1564 66.9
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 0.0e+00 1986.5 1490 69.1
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 1978.0 1488 68.4
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 0.0e+00 1972.6 1551 66.7
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 0.0e+00 1971.8 1493 68.3
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 0.0e+00 1963.3 1481 68.9
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 0.0e+00 1958.7 1493 67.0
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 0.0e+00 1951.4 1488 67.4
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 0.0e+00 1951.0 1488 67.4
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 0.0e+00 1949.1 1482 68.4
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 0.0e+00 1947.9 1483 68.4
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 0.0e+00 1945.2 1493 66.9
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 0.0e+00 1944.1 1496 68.0
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 0.0e+00 1942.5 1484 68.5
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1942.5 1483 68.5
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1941.0 1482 68.1
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 0.0e+00 1941.0 1478 67.6
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1938.7 1492 68.0
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1937.5 1490 68.2
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 1937.5 1491 68.2
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1934.5 1482 67.9
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 1933.3 1494 67.9
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 1933.3 1495 66.7
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 1932.9 1492 67.6
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 0.0e+00 1932.9 1491 67.2
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 0.0e+00 1931.8 1489 67.2
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1931.8 1493 67.8
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 1930.6 1488 67.9
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 0.0e+00 1929.1 1482 67.7
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1927.5 1480 67.8
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 0.0e+00 1926.8 1482 67.4
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 0.0e+00 1924.8 1482 67.6
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 1918.7 1490 66.9
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 0.0e+00 1911.0 1505 66.8
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 0.0e+00 1870.5 1477 65.7
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1866.7 1479 65.3
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 0.0e+00 1855.9 1473 64.6
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 0.0e+00 1852.8 1455 67.1
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1827.0 1573 61.9
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1820.4 1303 72.8
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 1795.0 1305 72.0
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 0.0e+00 1788.9 1490 62.8
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 0.0e+00 1773.8 1305 71.0
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1755.7 1276 70.8
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 0.0e+00 1739.9 1591 60.3
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1717.2 1358 66.9
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 1709.1 1300 68.3
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1697.2 1439 61.2
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1677.9 1394 65.5
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 1648.6 1428 61.3
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1640.6 1220 70.0
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1600.5 1437 59.8
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 0.0e+00 1570.4 1517 54.8
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 0.0e+00 1543.1 1526 55.0
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 0.0e+00 1506.9 988 76.9
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1347.0 1220 58.8
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1335.1 1417 54.1
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 1309.7 1083 65.0
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 0.0e+00 1283.5 1297 53.8
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 0.0e+00 1213.4 1360 51.7
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 0.0e+00 1155.2 1361 50.0
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.9e-309 1065.8 731 75.8
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 1.6e-291 1006.9 1272 48.0
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 4.6e-283 978.8 851 59.3
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 4.1e-279 965.7 748 64.4
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 2.7e-238 830.1 706 62.9
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 9.5e-236 821.6 774 57.2
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 6.4e-232 808.9 576 69.8
Peaxi162Scf01152g00113 Petunia axillaris HOM05D001486 ORTHO05D004921 1.1e-207 728.4 919 48.6
CDE06G1153 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 2.4e-207 727.2 598 63.5
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 1.3e-187 661.8 610 58.0
TAR629G0795 Trochodendron aralioides HOM05D001486 ORTHO05D004921 1.4e-178 631.7 437 77.8
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 6.7e-173 612.8 881 41.8
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 6.7e-173 612.8 371 78.7
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 9.1e-154 549.3 737 44.2
MD16G1018600 Malus domestica HOM05D001486 ORTHO05D004921 2.3e-149 534.6 480 62.1
AL1G32070 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 3.7e-139 500.7 467 57.8
RcHm_v2.0_Chr2g0167011 Rosa chinensis HOM05D001486 ORTHO05D004921 5.2e-133 480.3 558 51.4
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.2e-108 399.4 766 36.4
MCO15G435 Micromonas commoda HOM05D001486 ORTHO05D004921 3.3e-103 381.3 1770 25.0
PRCOL_00002396 Prasinoderma coloniale HOM05D001486 ORTHO05D004921 4.4e-100 370.9 1570 27.5
CDE07G0203 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 8.7e-96 356.7 441 48.5
MD16G1018800 Malus domestica HOM05D001486 ORTHO05D004921 5.8e-92 344.0 213 81.2
SEGI_12334 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 9.0e-85 320.1 335 54.6
Cre09.g394350 Chlamydomonas reinhardtii HOM05D001486 ORTHO05D004921 2.4e-82 312.0 1788 24.3
SEGI_06977 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.2e-81 309.7 219 69.9
vmacro04889 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 5.8e-76 290.8 247 64.0
AL1G32080 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 7.6e-76 290.4 229 65.5
vmacro09906 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 1.1e-69 270.0 274 56.9
Zm00001eb255180 Zea mays HOM05D001486 ORTHO05D004921 4.9e-67 261.2 195 66.2
CAN.G601.1 Capsicum annuum HOM05D001486 ORTHO05D004921 2.5e-66 258.8 152 77.0
FvH4_1g18130 Fragaria vesca HOM05D001486 ORTHO05D004921 5.7e-63 247.7 160 68.8
SGA_v2.0_scaffold23G10209 Striga asiatica HOM05D001486 ORTHO05D004921 1.3e-43 183.3 102 81.4
CSS0012816 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 7.2e-42 177.6 189 54.0
Pp3c3_36410 Physcomitrium patens HOM05D001486 ORTHO05D004921 1.0e-40 173.7 186 52.2
RcHm_v2.0_Chr2g0167021 Rosa chinensis HOM05D001486 ORTHO05D004921 3.0e-40 172.2 218 50.9
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 4.4e-39 168.3 1083 22.3
CARHR227050 Cardamine hirsuta HOM05D001486 ORTHO05D004921 1.7e-35 156.4 155 53.5
AL2G18360 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 2.2e-35 156.0 338 35.8
Zm00001eb201400 Zea mays HOM05D001486 ORTHO05D004921 5.7e-31 141.4 121 60.3
Zm00001eb235300 Zea mays HOM05D001486 ORTHO05D004921 3.7e-30 138.7 129 55.0
Rhsim12G0118300 Rhododendron simsii HOM05D001486 ORTHO05D004921 5.0e-27 128.3 101 67.3
BcaC09g49263 Brassica carinata HOM05D001486 ORTHO05D012131 6.1e-25 121.3 107 57.9
BcaC01g04114 Brassica carinata HOM05D001486 ORTHO05D012131 1.5e-23 116.7 102 58.8
ClCG01G015310 Citrullus lanatus HOM05D001486 ORTHO05D004921 1.3e-22 113.6 56 89.3
SEGI_12550 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.7e-22 113.2 58 82.8
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 5.9e-20 104.8 66 75.8
AL3G34910 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 2.0e-15 89.7 148 39.2
GSVIVG01026805001 Vitis vinifera HOM05D001486 ORTHO05D004921 9.8e-15 87.4 70 60.0
GSVIVG01001572001 Vitis vinifera HOM05D001486 ORTHO05D004921 5.4e-13 81.6 89 55.1
Hma1.2p1_0277F.1_g111730 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 5.9e-12 78.2 53 71.7
Hma1.2p1_0705F.1_g206905 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 5.9e-12 78.2 53 71.7
Zm00001eb334690 Zea mays HOM05D001486 ORTHO05D037216 1.8e-08 66.6 54 63.0
FvH4_4g10520 Fragaria vesca HOM05D002057 ORTHO05D004921 4.0e-08 65.5 34 76.5
SEGI_21189 Sequoiadendron giganteum HOM05D001486 ORTHO05D037216 4.4e-07 62.0 53 60.4
CSS0014875 Camellia sinensis var. sinensis HOM05D014252 ORTHO05D004921 9.8e-07 60.8 35 77.1
SMO306G0002 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 3.7e-06 58.9 157 29.3
SMO270G0006 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 8.3e-06 57.8 144 31.9


User provided reference genes

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