Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0711 Papaver somniferum HOM05D001670 ORTHO05D015222 9.3e-110 400.2 201 100.0
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 8.9e-44 181.0 191 58.6
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 1.2e-43 180.6 191 58.1
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 3.5e-32 142.5 191 45.5
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 2.1e-29 133.3 191 43.5
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 4.7e-29 132.1 191 43.5
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 8.1e-29 131.3 191 44.5
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 8.1e-29 131.3 188 44.1
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.4e-28 130.6 192 42.7
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.8e-28 130.2 192 44.3
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 2.4e-28 129.8 192 45.3
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 5.2e-28 128.6 191 42.4
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 6.8e-28 128.3 191 44.5
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 2.6e-27 126.3 192 43.2
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 3.4e-27 125.9 188 42.6
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 3.4e-27 125.9 191 45.0
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 3.4e-27 125.9 192 42.2
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 3.4e-27 125.9 188 42.6
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 5.8e-27 125.2 191 42.4
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 7.6e-27 124.8 191 42.9
Hma1.2p1_0341F.1_g130260 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 1.3e-26 124.0 191 41.9
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.7e-26 123.6 188 43.6
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 2.9e-26 122.9 188 42.0
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 2.9e-26 122.9 193 42.5
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 4.9e-26 122.1 188 43.1
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.9e-26 122.1 188 42.6
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 6.4e-26 121.7 188 41.0
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 8.4e-26 121.3 188 41.0
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 1.1e-25 120.9 188 43.6
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.1e-25 120.9 191 40.8
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 1.4e-25 120.6 191 40.3
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 3.2e-25 119.4 188 40.4
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 4.2e-25 119.0 191 41.4
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 4.2e-25 119.0 192 42.7
Gohir.D11G082333 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.2e-25 119.0 188 41.5
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 4.2e-25 119.0 188 41.5
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 5.4e-25 118.6 188 42.0
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 7.1e-25 118.2 192 42.2
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 1.2e-24 117.5 188 38.8
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 1.2e-24 117.5 191 39.8
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.6e-24 117.1 191 38.7
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 2.1e-24 116.7 187 41.7
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 2.1e-24 116.7 188 40.4
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 2.7e-24 116.3 191 38.7
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 2.7e-24 116.3 188 40.4
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 2.7e-24 116.3 189 43.9
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 4.6e-24 115.5 188 39.9
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 6.0e-24 115.2 191 39.3
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 7.8e-24 114.8 187 39.0
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.0e-23 114.4 188 41.5
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 1.3e-23 114.0 183 39.9
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 1.3e-23 114.0 188 39.9
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 1.7e-23 113.6 188 39.9
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 2.3e-23 113.2 182 39.6
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 2.3e-23 113.2 188 41.0
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 3.0e-23 112.8 183 39.3
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 3.0e-23 112.8 191 38.7
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 3.9e-23 112.5 181 44.8
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 3.9e-23 112.5 187 38.0
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 5.1e-23 112.1 176 43.2
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 8.7e-23 111.3 191 39.8
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 8.7e-23 111.3 195 38.5
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.1e-22 110.9 191 40.3
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 1.9e-22 110.2 192 40.1
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.9e-22 110.2 192 39.1
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.9e-22 110.2 192 38.5
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.9e-22 110.2 192 38.5
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 2.5e-22 109.8 184 38.0
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 3.3e-22 109.4 191 37.7
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 3.3e-22 109.4 186 40.9
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 5.6e-22 108.6 192 38.0
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 5.6e-22 108.6 192 38.0
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 7.3e-22 108.2 187 40.1
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 9.6e-22 107.8 190 37.4
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 9.6e-22 107.8 202 37.6
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.2e-21 107.5 189 42.3
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.2e-21 107.5 183 40.4
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.6e-21 107.1 193 38.3
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 2.1e-21 106.7 183 39.9
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 2.8e-21 106.3 199 39.2
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.8e-21 106.3 191 37.7
Haze_02721 Corylus avellana HOM05D001670 ORTHO05D002980 4.7e-21 105.5 170 41.2
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 8.1e-21 104.8 190 38.4
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 8.1e-21 104.8 171 40.9
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 8.1e-21 104.8 217 34.6
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 1.1e-20 104.4 194 38.1
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 1.4e-20 104.0 195 34.9
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.4e-20 104.0 194 38.1
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 1.4e-20 104.0 190 37.4
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 1.4e-20 104.0 190 37.4
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 1.8e-20 103.6 192 36.5
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 2.4e-20 103.2 197 38.6
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.4e-20 103.2 196 37.2
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 3.1e-20 102.8 197 38.6
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 3.1e-20 102.8 193 34.7
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 3.1e-20 102.8 182 40.1
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 5.3e-20 102.1 192 33.3
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 5.3e-20 102.1 192 37.0
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 5.3e-20 102.1 192 38.5
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 6.9e-20 101.7 193 36.3
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 1.2e-19 100.9 197 34.0
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 1.2e-19 100.9 197 34.0
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 1.2e-19 100.9 197 34.0
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 1.2e-19 100.9 177 38.4
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.2e-19 100.9 195 34.4
C08p54070 Brassica napus HOM05D001670 ORTHO05D002980 1.5e-19 100.5 195 34.4
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 1.5e-19 100.5 195 34.4
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 3.4e-19 99.4 197 34.0
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 4.4e-19 99.0 189 39.2
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 5.8e-19 98.6 192 33.3
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 9.9e-19 97.8 184 38.0
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 1.3e-18 97.4 197 34.0
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 1.7e-18 97.1 156 41.0
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 1.7e-18 97.1 195 34.4
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 2.9e-18 96.3 180 35.0
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 3.8e-18 95.9 177 37.3
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 4.9e-18 95.5 197 35.0
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 1.1e-17 94.4 178 37.1
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 1.4e-17 94.0 199 31.2
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 1.4e-17 94.0 195 32.8
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 1.4e-17 94.0 195 32.8
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 1.4e-17 94.0 195 32.8
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 1.4e-17 94.0 204 35.8
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 3.2e-17 92.8 195 32.3
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 3.2e-17 92.8 195 32.3
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 4.2e-17 92.4 192 31.8
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 5.4e-17 92.0 172 37.2
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 7.1e-17 91.7 198 31.8
GSVIVG01000874001 Vitis vinifera HOM05D001670 ORTHO05D002980 2.1e-16 90.1 193 36.8
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 3.5e-16 89.4 181 34.3
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 7.8e-16 88.2 187 35.3
arahy.Tifrunner.gnm1.ann1.A8401K Arachis hypogaea HOM05D001670 ORTHO05D015222 2.3e-15 86.7 168 36.3
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 2.3e-15 86.7 182 34.6
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.3e-15 86.7 206 32.5
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 5.1e-15 85.5 221 31.2
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 8.7e-15 84.7 97 52.6
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 1.1e-14 84.3 167 37.7
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 1.9e-14 83.6 206 32.0
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 4.3e-14 82.4 192 34.4
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.8e-13 79.7 125 41.6
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 1.8e-12 77.0 163 31.3
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 5.8e-11 72.0 168 34.5
Thecc.03G154100 Theobroma cacao HOM05D001670 ORTHO05D002980 9.9e-11 71.2 152 36.2
CSS0031316 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D015222 1.3e-10 70.9 153 34.6
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.3e-10 70.9 167 32.9
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 2.2e-10 70.1 77 50.6
CSS0047652 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D015222 2.9e-10 69.7 152 34.2
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 3.8e-10 69.3 186 28.5
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 6.4e-10 68.6 90 42.2
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.2e-08 64.3 82 47.6
Cpa.g.sc587.1 Carica papaya HOM05D001670 ORTHO05D002980 1.0e-07 61.2 128 34.4
Lj5A710T19 Lonicera japonica HOM05D001670 ORTHO05D015222 2.5e-06 56.6 130 31.5
BcaNung05010 Brassica carinata HOM05D001670 ORTHO05D010670 9.6e-06 54.7 148 27.7


User provided reference genes

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