Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 5.3e-204 714.1 363 100.0
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 9.0e-196 686.8 363 95.6
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 1.9e-190 669.1 363 94.8
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 3.6e-168 595.1 318 94.7
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 6.8e-151 537.7 351 77.2
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 4.4e-150 535.0 366 76.0
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 5.4e-148 528.1 366 74.3
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 7.0e-148 527.7 366 73.8
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 4.5e-147 525.0 363 73.8
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 1.0e-146 523.9 382 70.4
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 1.0e-146 523.9 366 73.5
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 6.5e-146 521.2 366 73.0
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.9e-145 519.6 366 73.8
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 3.3e-145 518.8 366 73.2
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 5.5e-145 518.1 359 74.4
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 7.2e-145 517.7 375 72.5
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 1.6e-144 516.5 366 73.8
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 1.6e-144 516.5 366 71.9
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.7e-144 515.0 365 73.2
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 6.1e-144 514.6 366 72.7
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 1.0e-143 513.8 365 73.2
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 3.0e-143 512.3 365 72.1
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 5.2e-143 511.5 365 73.4
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 5.2e-143 511.5 365 72.9
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 2.6e-142 509.2 364 71.7
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 3.4e-142 508.8 366 71.9
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 4.4e-142 508.4 365 71.2
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 5.7e-142 508.1 369 71.5
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 1.3e-141 506.9 365 71.8
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 1.3e-141 506.9 365 71.0
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 1.3e-141 506.9 368 71.5
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 3.7e-141 505.4 365 71.5
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.9e-141 505.0 365 72.3
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.9e-141 505.0 365 72.3
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 8.3e-141 504.2 364 72.0
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 4.1e-140 501.9 358 73.2
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 3.5e-139 498.8 366 71.3
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 3.5e-139 498.8 364 69.0
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 7.8e-139 497.7 366 69.9
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 7.8e-139 497.7 387 67.2
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 2.3e-138 496.1 369 70.5
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 2.9e-138 495.7 366 69.7
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 1.1e-137 493.8 366 70.2
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 4.3e-137 491.9 364 68.4
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 4.3e-137 491.9 363 67.5
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 9.5e-137 490.7 367 69.8
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 1.2e-136 490.3 367 69.8
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 3.6e-136 488.8 366 70.2
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 3.6e-136 488.8 364 67.3
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 4.7e-136 488.4 366 69.4
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 1.0e-135 487.3 366 69.4
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 1.4e-135 486.9 364 66.8
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 2.3e-135 486.1 366 69.9
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 2.3e-135 486.1 364 67.0
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.0e-135 485.7 339 72.3
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 6.8e-135 484.6 364 68.7
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 4.4e-134 481.9 366 68.6
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 9.8e-134 480.7 367 68.4
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 1.7e-133 479.9 366 68.3
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 2.9e-133 479.2 366 68.6
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 8.3e-133 477.6 366 68.6
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 3.2e-132 475.7 367 67.8
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 9.2e-132 474.2 370 65.7
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 2.0e-131 473.0 361 68.1
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 2.0e-131 473.0 366 67.5
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 6.0e-131 471.5 366 68.0
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 6.0e-131 471.5 361 67.9
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 5.0e-130 468.4 367 66.8
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 1.5e-129 466.8 365 66.6
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 1.2e-126 457.2 367 65.7
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 2.0e-126 456.4 309 74.8
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 2.0e-126 456.4 365 68.2
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 2.4e-124 449.5 369 63.7
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 2.1e-123 446.4 392 60.2
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 1.7e-122 443.4 367 65.4
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 6.6e-122 441.4 365 65.8
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 2.5e-121 439.5 366 65.6
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.5e-121 439.5 363 64.5
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 4.0e-119 432.2 363 63.1
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 4.0e-119 432.2 363 62.5
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 6.8e-119 431.4 359 63.5
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 3.4e-118 429.1 379 61.7
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 5.8e-118 428.3 369 62.1
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 1.3e-117 427.2 368 63.0
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 2.9e-117 426.0 363 62.3
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 4.9e-117 425.2 364 62.9
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 8.3e-117 424.5 363 62.0
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 7.1e-116 421.4 363 62.3
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 7.1e-116 421.4 365 62.5
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 9.2e-116 421.0 365 62.7
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 2.1e-115 419.9 364 62.4
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 3.5e-115 419.1 365 62.2
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 6.0e-115 418.3 335 66.9
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 5.1e-114 415.2 341 64.8
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 6.6e-114 414.8 371 62.3
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 4.3e-113 412.1 390 58.7
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 3.8e-109 399.1 279 73.1
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 1.6e-107 393.7 304 67.4
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 2.7e-107 392.9 363 59.0
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 7.8e-107 391.3 363 60.3
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 2.3e-106 389.8 380 56.6
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 6.2e-104 381.7 385 52.2
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 1.8e-103 380.2 360 58.1
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 2.4e-103 379.8 362 57.5
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.1e-100 370.9 310 61.0
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.8e-99 364.8 378 56.6
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 5.8e-94 348.6 245 74.7
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 7.6e-86 321.6 370 46.5
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 6.4e-85 318.5 361 48.8
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 1.5e-81 307.4 418 46.2
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 1.9e-76 290.4 279 57.3
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 7.1e-76 288.5 216 69.4
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 5.3e-71 272.3 307 51.1
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 3.9e-66 256.1 366 45.9
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 3.4e-62 243.0 173 71.7
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 4.5e-62 242.7 167 74.3
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 9.4e-60 235.0 199 62.3
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 2.1e-59 233.8 200 63.0
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 2.7e-59 233.4 216 58.8
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 5.0e-53 212.6 192 62.5
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 2.5e-52 210.3 162 67.9
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.8e-47 194.1 143 68.5
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.2e-46 191.4 123 78.0
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 2.9e-45 186.8 123 76.4
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 8.5e-45 185.3 308 40.9
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 5.5e-44 182.6 196 51.0
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 6.7e-42 175.6 250 42.8
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 1.3e-40 171.4 146 63.0
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 2.4e-39 167.2 165 57.6
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 9.1e-39 165.2 142 63.4
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.6e-35 153.3 123 66.7
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 1.8e-34 151.0 177 45.8
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 1.1e-31 141.7 142 57.7
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.2e-27 128.3 87 72.4
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 1.0e-26 125.2 115 59.1
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 4.4e-25 119.8 72 79.2
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 2.0e-22 110.9 77 67.5
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 2.7e-22 110.5 79 70.9
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 3.9e-21 106.7 387 23.0
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-15 87.4 134 37.3
MCO12G220 Micromonas commoda HOM05D005334 ORTHO05D006560 7.8e-14 82.4 297 24.9


User provided reference genes

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