Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 0.0e+00 1103.2 532 100.0
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 0.0e+00 1096.3 532 99.6
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 9.9e-284 979.5 538 86.4
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.3e-275 952.6 538 84.8
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 1.9e-274 948.7 535 85.0
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 5.1e-272 940.6 540 84.6
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.5e-271 939.1 538 82.7
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 5.3e-269 930.6 533 83.5
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 5.3e-269 930.6 534 83.3
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 4.4e-268 927.5 533 83.3
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.7e-267 925.6 533 82.9
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 3.2e-266 921.4 539 81.1
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 9.3e-266 919.8 535 82.1
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 9.3e-266 919.8 538 80.7
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 4.6e-265 917.5 534 83.1
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 6.0e-265 917.1 533 81.8
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 1.7e-264 915.6 535 81.5
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 1.7e-264 915.6 540 81.7
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 1.7e-264 915.6 535 81.9
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.3e-262 909.4 516 83.3
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 1.3e-262 909.4 541 81.1
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 1.6e-262 909.1 539 82.2
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 6.2e-262 907.1 547 79.5
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.1e-261 906.4 544 80.0
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 1.4e-261 906.0 538 80.1
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 3.1e-261 904.8 536 80.8
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 6.9e-261 903.7 523 82.0
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 1.2e-260 902.9 534 81.1
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.5e-260 902.5 557 77.9
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 1.5e-260 902.5 536 80.2
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 2.6e-260 901.7 536 79.3
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 5.8e-260 900.6 524 81.9
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 5.8e-260 900.6 540 79.8
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 9.9e-260 899.8 541 79.7
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 9.9e-260 899.8 536 79.1
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 3.8e-259 897.9 505 83.4
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 3.8e-259 897.9 570 76.5
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 6.4e-259 897.1 534 80.9
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 6.4e-259 897.1 535 79.3
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 1.1e-258 896.3 536 79.3
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.4e-258 896.0 537 79.9
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 1.9e-258 895.6 536 79.9
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 3.2e-258 894.8 536 79.3
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 3.2e-258 894.8 516 81.4
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 4.2e-258 894.4 590 73.9
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 7.1e-258 893.6 516 81.2
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 1.2e-257 892.9 516 81.2
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 3.5e-257 891.3 528 80.1
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 1.0e-256 889.8 530 79.8
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.3e-256 889.4 539 79.4
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 3.9e-256 887.9 541 79.9
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 6.7e-256 887.1 530 79.6
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 6.7e-256 887.1 533 79.2
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 6.7e-256 887.1 516 80.8
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 6.7e-256 887.1 526 80.8
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 1.1e-255 886.3 562 76.0
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 4.3e-255 884.4 589 73.5
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 5.6e-255 884.0 513 80.9
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 9.6e-255 883.2 525 80.0
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 1.6e-254 882.5 534 79.4
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 1.6e-254 882.5 536 79.7
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 8.1e-254 880.2 535 77.9
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.1e-253 879.8 519 80.5
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.4e-253 879.4 516 80.6
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 2.4e-253 878.6 525 79.2
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 9.0e-253 876.7 522 80.1
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 9.9e-252 873.2 536 77.8
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 2.2e-251 872.1 531 78.0
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 2.2e-251 872.1 531 78.0
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 3.8e-251 871.3 536 77.4
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 8.4e-251 870.2 536 77.2
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 4.2e-250 867.8 526 78.5
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 2.1e-249 865.5 532 77.3
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 4.6e-249 864.4 525 79.2
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 6.0e-249 864.0 536 77.1
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 7.9e-249 863.6 536 76.9
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 7.9e-249 863.6 557 75.8
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 1.8e-248 862.4 534 76.8
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 5.1e-248 860.9 520 80.0
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 8.7e-248 860.1 527 79.7
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 4.3e-247 857.8 537 78.2
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 9.6e-247 856.7 502 80.5
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 3.7e-246 854.7 538 77.0
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 6.2e-246 854.0 513 79.9
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 6.9e-245 850.5 485 82.7
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 2.6e-244 848.6 532 76.1
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.7e-243 845.9 538 76.4
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 3.8e-243 844.7 543 74.8
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 4.9e-243 844.3 510 78.0
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 6.5e-243 844.0 483 81.4
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 2.5e-242 842.0 535 76.6
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.2e-241 839.7 536 75.6
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 1.2e-241 839.7 535 76.8
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 3.9e-240 834.7 478 80.3
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 6.3e-238 827.4 533 75.2
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.4e-237 826.2 548 73.4
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 9.0e-237 823.5 533 74.9
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 1.5e-236 822.8 548 73.2
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 3.4e-236 821.6 525 76.4
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.0e-235 820.1 560 72.5
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 3.7e-230 801.6 520 74.0
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.7e-227 792.7 520 72.7
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 1.2e-225 786.6 541 70.4
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.8e-224 782.7 473 77.4
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 1.4e-216 756.5 533 70.5
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 4.8e-214 748.0 537 68.7
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 2.4e-213 745.7 398 85.2
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 7.7e-212 740.7 426 79.3
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.0e-208 730.3 473 73.6
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 7.7e-204 714.1 439 78.6
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 6.8e-192 674.5 407 79.6
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 2.0e-191 672.9 398 78.6
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.1e-189 667.2 519 65.9
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.2e-182 642.9 332 88.0
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.2e-156 557.4 398 70.1
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 4.6e-156 555.4 413 67.8
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 1.3e-155 553.9 283 89.4
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 3.3e-154 549.3 491 54.8
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 4.8e-153 545.4 477 55.6
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 6.2e-137 491.9 346 68.2
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 1.0e-134 484.6 451 53.9
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 3.2e-133 479.6 394 60.9
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 2.1e-132 476.9 463 52.3
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 3.2e-125 453.0 334 69.2
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 4.4e-106 389.4 269 72.5
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 1.2e-90 338.2 181 84.0
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 4.4e-90 336.3 230 72.6
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 5.4e-88 329.3 182 84.1
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.6e-74 283.9 172 75.6
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 4.0e-59 233.4 135 77.8
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 2.5e-45 187.6 115 78.3
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 8.1e-44 182.6 102 80.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 1.5e-34 151.8 80 87.5
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 2.4e-27 127.9 67 86.6
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 2.3e-22 111.3 57 91.2
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 1.9e-21 108.2 67 76.1
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 1.9e-21 108.2 67 76.1
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 4.0e-19 100.5 53 83.0
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 1.7e-17 95.1 50 82.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 3.1e-11 74.3 77 48.1
CBR_g21303 Chara braunii HOM05D001677 ORTHO05D000002 6.7e-06 56.6 183 27.3


User provided reference genes

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